##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935875.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 589798 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.581711026487035 31.0 31.0 34.0 30.0 34.0 2 31.62491395359089 31.0 31.0 34.0 30.0 34.0 3 31.663762847619015 31.0 31.0 34.0 30.0 34.0 4 35.4529364290825 37.0 35.0 37.0 33.0 37.0 5 33.320236759025974 37.0 35.0 37.0 30.0 37.0 6 34.291923675563496 37.0 35.0 37.0 30.0 37.0 7 35.42763624156067 37.0 35.0 37.0 32.0 37.0 8 35.34800050186674 37.0 35.0 37.0 33.0 37.0 9 37.20275585878555 39.0 37.0 39.0 34.0 39.0 10 36.71727777985005 39.0 35.0 39.0 32.0 39.0 11 36.78201689391961 39.0 35.0 39.0 32.0 39.0 12 36.79979755780793 39.0 35.0 39.0 33.0 39.0 13 36.70075517380527 39.0 35.0 39.0 32.0 39.0 14 37.699770090776845 39.0 36.0 41.0 33.0 41.0 15 37.698951166331526 39.0 36.0 41.0 33.0 41.0 16 37.837188325494495 39.0 36.0 41.0 33.0 41.0 17 37.70266938850251 39.0 36.0 41.0 33.0 41.0 18 37.69757951027301 39.0 36.0 41.0 33.0 41.0 19 37.600461513942065 39.0 36.0 41.0 33.0 41.0 20 37.50346050681759 39.0 36.0 41.0 32.0 41.0 21 37.569895116633155 39.0 36.0 41.0 33.0 41.0 22 37.65611446630881 39.0 36.0 41.0 33.0 41.0 23 37.64173835787846 39.0 36.0 41.0 33.0 41.0 24 37.57795380791389 39.0 36.0 41.0 33.0 41.0 25 37.46066449869277 39.0 35.0 41.0 33.0 41.0 26 37.455557665505815 39.0 36.0 41.0 33.0 41.0 27 37.48085107104466 39.0 36.0 41.0 33.0 41.0 28 37.35558614983435 39.0 36.0 41.0 32.0 41.0 29 37.34086246477607 39.0 36.0 41.0 32.0 41.0 30 37.277620473450234 39.0 36.0 41.0 32.0 41.0 31 37.21966842885191 39.0 35.0 41.0 32.0 41.0 32 37.11482575390218 39.0 35.0 41.0 32.0 41.0 33 37.013731820046864 39.0 35.0 41.0 31.0 41.0 34 36.872081627947196 39.0 35.0 41.0 31.0 41.0 35 36.874150132757315 39.0 35.0 41.0 31.0 41.0 36 36.73194381805296 39.0 35.0 41.0 31.0 41.0 37 36.7450923875632 39.0 35.0 41.0 31.0 41.0 38 36.60716550412175 39.0 35.0 41.0 30.0 41.0 39 36.58835058782837 39.0 35.0 41.0 30.0 41.0 40 36.5588726987884 39.0 35.0 41.0 30.0 41.0 41 36.324555186691036 39.0 35.0 41.0 30.0 41.0 42 36.43032021132659 39.0 35.0 41.0 30.0 41.0 43 36.367464793030834 39.0 35.0 40.0 30.0 41.0 44 36.27654383365152 39.0 35.0 40.0 30.0 41.0 45 36.27336308363202 39.0 35.0 40.0 30.0 41.0 46 36.143686482490615 39.0 35.0 40.0 30.0 41.0 47 36.02855553935415 39.0 35.0 40.0 30.0 41.0 48 35.96706669062967 38.0 35.0 40.0 29.0 41.0 49 35.944874346810266 39.0 35.0 40.0 29.0 41.0 50 35.76636407719253 38.0 35.0 40.0 28.0 41.0 51 34.4699609018681 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 7.0 11 6.0 12 5.0 13 3.0 14 13.0 15 9.0 16 31.0 17 55.0 18 136.0 19 313.0 20 708.0 21 1180.0 22 1943.0 23 2701.0 24 3462.0 25 4490.0 26 5562.0 27 6199.0 28 6965.0 29 8179.0 30 10139.0 31 13333.0 32 18223.0 33 25321.0 34 39335.0 35 50106.0 36 49454.0 37 72030.0 38 118512.0 39 151332.0 40 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.224476854787575 18.46801786374318 21.955652613267592 11.351852668201655 2 28.52468133157454 31.613535481639477 23.257623796621893 16.60415939016409 3 26.27747126982458 32.477899212950874 26.122842057789274 15.121787459435264 4 24.728127257128712 22.883597435054035 35.523179122343585 16.86509618547367 5 28.530446017110943 29.842081526217452 23.83087090834489 17.796601548326716 6 21.374945320262192 38.71918860355579 25.753732633884823 14.152133442297194 7 70.80068091109159 5.005612090919264 19.151811298105454 5.041895699883689 8 68.96818910881353 11.283354640063207 12.316928846825522 7.431527404297743 9 63.919172326796634 5.671263720799324 14.174344436569807 16.235219515834235 10 39.991997260078875 17.81389560493593 23.56874726601311 18.625359868972087 11 30.603020017022775 22.20862057857097 26.501615807445937 20.686743596960316 12 24.459221631812923 18.91579829026209 32.82038935364311 23.804590724281873 13 23.246433524698286 21.779490605258072 37.738683413643315 17.235392456400326 14 19.460900172601466 29.29596234643047 29.483992824662003 21.759144656306056 15 16.698089854492554 23.027884123038735 40.59779789012509 19.676228132343613 16 18.82983665593983 24.084347522372067 30.53909982739853 26.54671599428957 17 18.867985310224856 25.613515135690523 31.59064628906846 23.927853265016157 18 19.694539486400426 24.31951278234243 32.57505111919674 23.4108966120604 19 18.656726540273112 28.060793695468618 28.723393433005878 24.559086331252395 20 20.336454175836476 26.96245155120906 33.45196151902855 19.24913275392592 21 19.424955662786243 31.22899704644641 30.092167148752623 19.253880142014722 22 17.017182153889976 24.541961824217783 31.064533959084294 27.376322062807944 23 17.35865499713461 29.359204337756317 29.814444945557632 23.46769571955144 24 20.715906123791537 24.806798259743164 28.45380960939169 26.02348600707361 25 16.282862946296866 32.55165327790193 27.073167423422934 24.09231635237827 26 16.826099783315644 26.559432212384582 31.398207521897326 25.216260482402447 27 21.139101861993428 26.744241248698707 27.172523474138604 24.94413341516926 28 15.458173815441898 27.942278542823136 31.92771084337349 24.671836798361475 29 18.51210075313921 25.871400038657306 27.742549143944196 27.87395006425929 30 18.012438156792665 28.67117216402904 27.08130580300374 26.235083876174553 31 19.184703915577874 28.874631653549184 24.717106534779703 27.223557896093237 32 19.76625895645628 29.08928141499293 24.788486905686355 26.35597272286444 33 18.578055537658656 23.493467254890657 24.763224019070936 33.16525318837975 34 17.920711836934 27.187952485427214 30.060800477451604 24.83053520018718 35 16.70673688279716 23.85901613772851 28.594196657160587 30.84005032231374 36 21.107904740267006 28.99619869853747 26.021281862603807 23.87461469859172 37 16.768792027100805 24.48228037395854 31.541985561158224 27.20694203778243 38 17.6262042258536 27.132679324107578 25.310190946730916 29.930925503307915 39 21.168433938399247 22.70234893980651 29.296640544728874 26.83257657706537 40 18.0595729385315 21.73133852607164 32.76206429998067 27.447024235416194 41 19.184703915577874 24.662172472609267 29.829026208973243 26.324097402839612 42 19.519564325413107 22.75863939857375 33.812254365053796 23.909541910959344 43 24.254914394419785 22.736597953875734 26.42701399462189 26.581473657082594 44 19.43987602535105 23.290685963668917 28.225256782830733 29.044181228149295 45 17.86459092774136 21.744054744166647 28.051298919291014 32.34005540880098 46 24.257457638038787 24.15962753349452 27.272557723152673 24.310357105314022 47 16.445121889189178 22.168776428539942 36.37024879704577 25.015852885225108 48 19.543131716282524 23.360031739680366 28.654217206569026 28.442619337468084 49 19.618920376128777 18.606709415766076 35.5419991251242 26.232371082980954 50 20.581114211984442 19.011085151187356 31.621165212496482 28.78663542433172 51 18.59687554043927 18.936652887937903 27.795279061644834 34.67119250997799 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 171.0 1 290.5 2 410.0 3 2121.0 4 3832.0 5 2639.5 6 1447.0 7 1446.5 8 1446.0 9 1529.0 10 1612.0 11 1597.0 12 1582.0 13 1510.0 14 1438.0 15 1427.0 16 1416.0 17 1421.5 18 1427.0 19 1450.0 20 1473.0 21 1566.5 22 1660.0 23 1778.5 24 1897.0 25 2209.5 26 2876.0 27 3230.0 28 3595.0 29 3960.0 30 4711.5 31 5463.0 32 6440.0 33 7417.0 34 8762.0 35 10107.0 36 11607.0 37 13107.0 38 14964.0 39 16821.0 40 19301.0 41 21781.0 42 25871.5 43 29962.0 44 36999.5 45 44037.0 46 77285.5 47 110534.0 48 94607.5 49 78681.0 50 76664.0 51 74647.0 52 60341.0 53 46035.0 54 38491.0 55 30947.0 56 26351.0 57 21755.0 58 18998.5 59 16242.0 60 14026.5 61 11811.0 62 10393.5 63 8976.0 64 7075.0 65 5174.0 66 4129.0 67 3084.0 68 2390.0 69 1696.0 70 1300.0 71 904.0 72 712.0 73 520.0 74 388.0 75 188.5 76 121.0 77 108.5 78 96.0 79 73.5 80 51.0 81 40.5 82 30.0 83 18.5 84 7.0 85 6.0 86 5.0 87 3.0 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 589798.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.008762561711706 #Duplication Level Percentage of deduplicated Percentage of total 1 74.32991054971718 29.738477424169048 2 11.79012754917865 9.43416827374769 3 4.286226029180519 5.144597984619354 4 2.1422832885931964 3.4284041373299248 5 1.3169440611008307 2.6344651123819744 6 0.8956995325582202 2.1501497954854796 7 0.6649301763393423 1.8622123481694484 8 0.5584446860154638 1.7874144677313872 9 0.44517985264434545 1.602998551953488 >10 3.4471923936771365 25.520323060963563 >50 0.0751101825481199 2.0264667413765647 >100 0.03819161823212178 2.679601589383095 >500 0.004243513136902419 1.158902645196034 >1k 0.0038191618232121774 3.35056309741338 >5k 4.243513136902419E-4 0.9327587361129522 >10k+ 0.0012730539410707258 6.548496033966633 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGC 14025 2.3779327837666457 No Hit GAATCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTC 12907 2.188376359363714 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCG 11639 1.9733874987707658 No Hit GCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGC 5494 0.9315053628530446 TruSeq Adapter, Index 20 (95% over 23bp) GAACTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCT 3100 0.5256036812603637 No Hit GAATGACTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCT 2823 0.4786384490961312 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACACCTTGT 2357 0.39962834733247654 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTC 2341 0.39691555413887464 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACACCTTGTCGTA 2114 0.358427800704648 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1971 0.33418221153683125 No Hit CCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGC 1932 0.32756977812742666 TruSeq Adapter, Index 20 (95% over 23bp) CTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGCT 1622 0.27500941000139034 TruSeq Adapter, Index 22 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTT 1475 0.250085622535173 No Hit TCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGC 972 0.16480218651131404 TruSeq Adapter, Index 20 (95% over 23bp) GAATAATACGGCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGC 727 0.1232625407342853 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCC 718 0.12173659456288424 No Hit ACTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGC 694 0.11766740477248143 TruSeq Adapter, Index 22 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTG 672 0.11393731413127885 No Hit GAATATGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTC 671 0.11376776455667872 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATG 632 0.10715533114727416 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCG 592 0.10037334816326945 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.781982984004693E-4 0.0 0.0 0.294846710229604 0.0 2 6.781982984004693E-4 0.0 0.0 1.9457509181109465 0.0 3 6.781982984004693E-4 0.0 0.0 2.506112262164334 0.0 4 6.781982984004693E-4 0.0 0.0 3.761457312503603 0.0 5 6.781982984004693E-4 0.0 0.0 7.763166372215572 0.0 6 6.781982984004693E-4 0.0 0.0 9.382025710497492 0.0 7 8.477478730005867E-4 0.0 0.0 11.139237501653108 0.0 8 8.477478730005867E-4 0.0 0.0 13.726055361327099 0.0 9 8.477478730005867E-4 0.0 0.0 14.544301608347265 0.0 10 8.477478730005867E-4 0.0 0.0 18.420035334131345 0.0 11 8.477478730005867E-4 0.0 0.0 20.872739480296644 0.0 12 8.477478730005867E-4 0.0 0.0 25.209817598567646 0.0 13 0.001017297447600704 0.0 0.0 26.14217070929369 0.0 14 0.001017297447600704 0.0 0.0 26.569266087711387 0.0 15 0.001017297447600704 0.0 0.0 27.50212784716123 0.0 16 0.001017297447600704 0.0 0.0 28.806981373283733 0.0 17 0.001017297447600704 0.0 0.0 30.312412046158176 0.0 18 0.001017297447600704 0.0 0.0 31.870742186307854 0.0 19 0.001017297447600704 0.0 0.0 33.29716275741864 0.0 20 0.001017297447600704 0.0 0.0 34.28478902946433 0.0 21 0.001017297447600704 0.0 0.0 35.36787171200987 0.0 22 0.001017297447600704 0.0 0.0 36.59964937147973 0.0 23 0.001017297447600704 0.0 0.0 37.74360035130672 0.0 24 0.0011868470222008212 0.0 0.0 38.67697075948036 0.0 25 0.0011868470222008212 0.0 0.0 39.475718805421515 0.0 26 0.0011868470222008212 0.0 0.0 40.309563613304896 0.0 27 0.0011868470222008212 0.0 0.0 41.11967148074425 0.0 28 0.0011868470222008212 0.0 0.0 41.879084025378184 0.0 29 0.0011868470222008212 0.0 0.0 42.692921983458746 0.0 30 0.0011868470222008212 0.0 0.0 43.58254860138556 0.0 31 0.0011868470222008212 0.0 0.0 44.40944187671033 0.0 32 0.0011868470222008212 0.0 0.0 45.161902888785654 0.0 33 0.0011868470222008212 0.0 0.0 45.90876876489917 0.0 34 0.0011868470222008212 0.0 0.0 46.65122635207308 0.0 35 0.0011868470222008212 0.0 0.0 47.37418573816798 0.0 36 0.0011868470222008212 0.0 0.0 48.05085809039705 0.0 37 0.0011868470222008212 0.0 0.0 48.76974828670155 0.0 38 0.0011868470222008212 0.0 0.0 49.491690375348846 0.0 39 0.0011868470222008212 0.0 0.0 50.227705078687954 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 20 7.0304895E-4 45.0 4 CGGGTCG 35 1.2105738E-7 45.0 6 CCTAGTG 20 7.0304895E-4 45.0 29 TTGTACG 20 7.0304895E-4 45.0 1 CGATTCC 20 7.0304895E-4 45.0 21 CTAAGCG 25 3.8884886E-5 45.0 1 TCGATTC 20 7.0304895E-4 45.0 20 TGGCCGT 20 7.0304895E-4 45.0 33 ACCTCGA 20 7.0304895E-4 45.0 19 GTGCTCG 20 7.0304895E-4 45.0 33 CGGATCC 40 6.8048394E-9 45.0 6 TACCTCG 20 7.0304895E-4 45.0 18 TGTTACG 20 7.0304895E-4 45.0 1 AAATTCG 20 7.0304895E-4 45.0 33 TCGTACA 20 7.0304895E-4 45.0 37 CCCCACG 20 7.0304895E-4 45.0 38 GTATACG 25 3.8884886E-5 45.0 1 ATGCGCG 20 7.0304895E-4 45.0 1 TTACGGT 20 7.0304895E-4 45.0 1 CGCACTT 35 1.2105738E-7 45.0 35 >>END_MODULE