SRR2935873.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935873.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	351151
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	2388	0.6800493235103987	No Hit
GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	2030	0.5780988805385717	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1242	0.3536939948910867	No Hit
CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT	1214	0.3457202172284857	No Hit
TCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	661	0.18823810839211622	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG	461	0.131282553659252	No Hit
ACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	449	0.12786522037528014	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCC	412	0.11732844274970028	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACG	20	7.026587E-4	45.000004	1
GGTAAGT	40	6.7921064E-9	45.000004	8
ACGTTAG	20	7.026587E-4	45.000004	1
CCGATAT	20	7.026587E-4	45.000004	11
TCTACCC	20	7.026587E-4	45.000004	30
ACTCGTC	20	7.026587E-4	45.000004	30
CCGACTC	20	7.026587E-4	45.000004	27
ATCGGTT	20	7.026587E-4	45.000004	34
GATTCGA	20	7.026587E-4	45.000004	9
GCGTATG	20	7.026587E-4	45.000004	1
CCCGCAA	20	7.026587E-4	45.000004	12
CGTATGG	25	3.885255E-5	44.999996	2
TTTAACG	25	3.885255E-5	44.999996	1
CGCATGG	50	2.1827873E-11	44.999996	2
CTACGAA	30	2.1611813E-6	44.999996	11
CTTAGTA	25	3.885255E-5	44.999996	41
GCGAGCT	25	3.885255E-5	44.999996	20
ACGGGCG	80	0.0	42.187504	5
TAGGGCG	60	3.6379788E-12	41.249996	5
CACGGGA	50	1.0768417E-9	40.499996	4