##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935872.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 583327 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7128557395766 31.0 31.0 34.0 30.0 34.0 2 31.768025481419514 33.0 31.0 34.0 30.0 34.0 3 31.80420415993088 33.0 31.0 34.0 30.0 34.0 4 35.54257046219359 37.0 35.0 37.0 33.0 37.0 5 33.51374957785256 37.0 35.0 37.0 32.0 37.0 6 34.473336567654165 37.0 35.0 37.0 30.0 37.0 7 35.57773770115218 37.0 35.0 37.0 32.0 37.0 8 35.58734809120785 37.0 35.0 37.0 33.0 37.0 9 37.45885412470192 39.0 37.0 39.0 35.0 39.0 10 36.78419822843791 39.0 35.0 39.0 32.0 39.0 11 36.914673930745536 39.0 37.0 39.0 33.0 39.0 12 36.957204106787444 39.0 37.0 39.0 33.0 39.0 13 36.980744933802136 39.0 37.0 39.0 33.0 39.0 14 38.05849206362812 40.0 37.0 41.0 33.0 41.0 15 38.10762573993661 40.0 37.0 41.0 33.0 41.0 16 38.11844814315127 40.0 37.0 41.0 33.0 41.0 17 38.05811320237191 40.0 37.0 41.0 33.0 41.0 18 38.03312035959247 40.0 37.0 41.0 33.0 41.0 19 37.90879558120917 40.0 37.0 41.0 33.0 41.0 20 37.9086824371236 40.0 36.0 41.0 33.0 41.0 21 37.928126076797405 40.0 36.0 41.0 33.0 41.0 22 38.02339682545125 40.0 37.0 41.0 34.0 41.0 23 37.99495823097508 40.0 37.0 41.0 34.0 41.0 24 37.95480408073002 40.0 36.0 41.0 33.0 41.0 25 37.80864249383279 40.0 36.0 41.0 33.0 41.0 26 37.85501785447956 40.0 36.0 41.0 33.0 41.0 27 37.841087417520534 40.0 36.0 41.0 33.0 41.0 28 37.769477497184255 40.0 36.0 41.0 33.0 41.0 29 37.77351639817804 40.0 36.0 41.0 33.0 41.0 30 37.630222842419435 40.0 36.0 41.0 33.0 41.0 31 37.56834845635467 40.0 36.0 41.0 33.0 41.0 32 37.448810015651596 40.0 36.0 41.0 33.0 41.0 33 37.365592540719014 40.0 36.0 41.0 33.0 41.0 34 37.2277110437199 40.0 36.0 41.0 32.0 41.0 35 37.14651816219719 40.0 36.0 41.0 32.0 41.0 36 37.06508184946008 40.0 36.0 41.0 31.0 41.0 37 36.94554683736566 39.0 36.0 41.0 31.0 41.0 38 36.8985628986829 39.0 35.0 41.0 31.0 41.0 39 36.86321222916135 39.0 35.0 41.0 31.0 41.0 40 36.82574782240493 39.0 35.0 41.0 31.0 41.0 41 36.71804493877362 39.0 35.0 41.0 31.0 41.0 42 36.782509638676075 39.0 35.0 41.0 31.0 41.0 43 36.72299756397355 39.0 35.0 41.0 31.0 41.0 44 36.58750409290158 39.0 35.0 41.0 30.0 41.0 45 36.58671379860696 39.0 35.0 41.0 30.0 41.0 46 36.49750311574812 39.0 35.0 41.0 30.0 41.0 47 36.38552647143026 39.0 35.0 41.0 30.0 41.0 48 36.33343390585384 39.0 35.0 40.0 30.0 41.0 49 36.27298239238026 39.0 35.0 40.0 30.0 41.0 50 36.14537814981991 39.0 35.0 40.0 29.0 41.0 51 34.77104094273024 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 6.0 10 7.0 11 9.0 12 6.0 13 9.0 14 14.0 15 15.0 16 21.0 17 57.0 18 123.0 19 279.0 20 582.0 21 980.0 22 1468.0 23 1982.0 24 2673.0 25 3771.0 26 5082.0 27 5720.0 28 6194.0 29 7305.0 30 9158.0 31 11652.0 32 15626.0 33 21636.0 34 34737.0 35 45713.0 36 46126.0 37 69870.0 38 120790.0 39 171641.0 40 71.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.102832545039064 19.366153118233857 23.071279059601217 12.459735277125866 2 29.966553922585444 28.782655354543852 24.923413454203217 16.32737726866749 3 29.396376303514156 27.93630330843592 27.035950676035913 15.631369712014015 4 26.03479694922402 24.148033607222022 32.02526198855873 17.791907454995226 5 25.539534429230947 31.62222904134388 25.00741436621312 17.830822163212055 6 21.671035285525956 37.50435004722908 26.877377525813138 13.94723714143182 7 75.32670354706708 5.123541341305991 14.72107411451896 4.828680997107969 8 75.47996235387699 7.649225905881265 10.446456275810995 6.424355464430756 9 70.93208440548783 5.61846100043372 12.582993758217947 10.866460835860503 10 37.82509638676077 19.726842748578413 24.228091619280438 18.21996924538038 11 29.235403127233955 24.58329547577945 25.0415290223151 21.139772374671498 12 22.7956189238626 21.40600383661308 32.50063857836171 23.297738661162608 13 22.435443584816063 25.06501499159134 35.58792924037461 16.91161218321799 14 20.90165550368833 29.390033377505244 30.326729261631986 19.38158185717445 15 17.960595000745723 25.85239496885966 37.745895526865716 18.441114503528897 16 19.54889795946356 25.34856092723292 31.255539345855755 23.84700176744776 17 20.515251308442778 26.050225688164613 30.101298242666637 23.333224760725972 18 21.033142645548722 25.707364822818075 32.083719766100316 21.175772765532884 19 20.261362837653664 29.06654415105078 28.702254481620088 21.969838529675464 20 20.92497004253189 27.56207067391017 31.682058262346846 19.830901021211087 21 19.97250255859921 29.92592491004188 30.837077659700306 19.26449487165861 22 18.65574540523583 25.158958868696292 29.76186598597356 26.423429740094324 23 17.943623387911067 29.168888119356723 29.75860880775277 23.128879684979438 24 20.707767684334858 25.293703188777478 30.020554508877524 23.97797461801014 25 18.059853221263545 31.016051031411195 27.54338475674879 23.38071099057647 26 19.3985534700091 26.916635094895312 30.865020820226047 22.819790614869532 27 21.884466174204174 27.177552213424033 29.372890334237916 21.565091278133877 28 19.540669298695242 26.47571602205967 31.49742768635774 22.48618699288735 29 22.530416044517054 24.876098654785395 28.863056227467617 23.73042907322994 30 22.77281867631706 26.39120081875175 30.383987026144855 20.45199347878634 31 23.99323192651806 26.747433257846797 26.29314261126264 22.966192204372504 32 23.811515667884393 29.295746639534944 26.985207267964622 19.907530424616038 33 24.62032444923688 25.654735679987382 26.733718823232937 22.9912210475428 34 24.501866020259648 27.357554167730964 27.124580209727988 21.015999602281397 35 21.99675310760517 26.031882631868577 29.806780759333957 22.164583501192297 36 28.86768484914979 25.053186291736885 27.364411385037897 18.71471747407543 37 21.420403992957638 28.563567261587412 31.272510958690408 18.743517786764542 38 24.287406548985388 27.444126536230968 27.122694474968583 21.14577243981506 39 24.7516401606646 28.278649882484437 26.87652037364977 20.09318958320119 40 23.45819754614479 24.70758253946757 30.849763511718127 20.984456402669515 41 22.525615992402205 26.927778073019077 27.531213196028986 23.015392738549735 42 23.48082636325766 23.55334143627845 31.99371878894685 20.97211341151704 43 26.274628124533923 23.626027939731916 28.630425130329982 21.468918805404172 44 22.75036128963686 24.992328488137872 28.59013897865177 23.667171243573502 45 22.309442216801212 24.199462737024003 27.78150162773196 25.70959341844283 46 26.076454544363624 25.831651886506197 27.497955692090372 20.59393787703981 47 21.112514935876447 24.113061798956675 33.39910547600231 21.37531778916457 48 22.321956638386357 24.28843513158143 29.582206892531975 23.807401337500238 49 23.437797324656668 21.58360576486259 32.87538550418547 22.103211406295266 50 23.282481352654685 21.774236405995264 30.546331645886443 24.396950595463608 51 21.76189341484279 21.954752651600216 27.697500715722057 28.585853217834938 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 90.0 1 236.5 2 383.0 3 1904.0 4 3425.0 5 2462.5 6 1500.0 7 1443.0 8 1386.0 9 1428.5 10 1471.0 11 1432.5 12 1394.0 13 1366.0 14 1338.0 15 1342.0 16 1346.0 17 1334.5 18 1323.0 19 1250.0 20 1177.0 21 1386.0 22 1595.0 23 1795.0 24 1995.0 25 2140.0 26 3056.0 27 3827.0 28 4503.5 29 5180.0 30 5939.0 31 6698.0 32 8298.0 33 9898.0 34 11505.0 35 13112.0 36 14620.0 37 16128.0 38 18137.0 39 20146.0 40 22872.5 41 25599.0 42 29931.5 43 34264.0 44 40183.5 45 46103.0 46 66730.0 47 87357.0 48 82015.0 49 76673.0 50 75691.5 51 74710.0 52 61771.5 53 48833.0 54 40739.0 55 32645.0 56 27209.0 57 21773.0 58 18149.5 59 14526.0 60 12112.5 61 9699.0 62 8142.0 63 6585.0 64 5347.5 65 4110.0 66 3133.0 67 2156.0 68 1548.0 69 940.0 70 814.0 71 688.0 72 546.5 73 405.0 74 360.0 75 238.5 76 162.0 77 101.5 78 41.0 79 30.0 80 19.0 81 16.0 82 13.0 83 9.0 84 5.0 85 3.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 2.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 583327.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.32736671286883 #Duplication Level Percentage of deduplicated Percentage of total 1 74.0326154282044 30.59573046514194 2 11.486673132247342 9.494279056944869 3 4.235194572427197 5.2508831758515155 4 2.2272635448466227 3.681877491363222 5 1.35956389016861 2.8093597729286333 6 0.925838341687334 2.2957476398248087 7 0.7303269163892652 2.1127741805728495 8 0.6182662760055023 2.044105369174334 9 0.46416661171688717 1.7264505400464238 >10 3.812149189875373 28.751989214972905 >50 0.0658488464908746 1.8302003330228727 >100 0.03500824747532684 2.474886934864264 >500 0.0020838242544837407 0.6191953880462822 >1k 0.0037508836580707333 2.7973163552878075 >5k 0.0012502945526902444 3.5152040819573216 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGC 7222 1.238070584766349 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTC 7113 1.2193846676049624 RNA PCR Primer, Index 17 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCG 6074 1.041268448057436 No Hit GCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGC 3768 0.6459498703128776 RNA PCR Primer, Index 47 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGC 2128 0.36480396072871646 RNA PCR Primer, Index 17 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCT 1746 0.2993175354475277 TruSeq Adapter, Index 9 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1692 0.2900602920831712 No Hit CTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGCT 1601 0.2744601227099037 RNA PCR Primer, Index 17 (96% over 25bp) GAATGACTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCT 1527 0.2617742706920818 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGAGATGT 1465 0.2511455838663391 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTC 1272 0.21805951036039822 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGAGATGTCGTA 1042 0.17863051084554632 No Hit CGCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTG 863 0.14794446339703116 RNA PCR Primer, Index 17 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGC 848 0.14537300690693214 RNA PCR Primer, Index 47 (95% over 23bp) GAATGCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTT 800 0.1371443461386152 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4286086534653803E-4 0.0 0.0 0.29023172251584445 0.0 2 3.4286086534653803E-4 0.0 0.0 1.6203604496277388 0.0 3 3.4286086534653803E-4 0.0 0.0 2.1502519170208134 0.0 4 3.4286086534653803E-4 0.0 0.0 3.100147944463397 0.0 5 3.4286086534653803E-4 0.0 0.0 5.9429788094842175 0.0 6 3.4286086534653803E-4 0.0 0.0 7.365679970239677 0.0 7 3.4286086534653803E-4 0.0 0.0 8.814609987194146 0.0 8 3.4286086534653803E-4 0.0 0.0 11.051262842282288 0.0 9 3.4286086534653803E-4 0.0 0.0 11.822356928446652 0.0 10 3.4286086534653803E-4 0.0 0.0 14.581872603188263 0.0 11 3.4286086534653803E-4 0.0 0.0 16.69715271194373 0.0 12 3.4286086534653803E-4 0.0 0.0 19.680385101323957 0.0 13 3.4286086534653803E-4 0.0 0.0 20.54062301247842 0.0 14 3.4286086534653803E-4 0.0 0.0 20.912284190514068 0.0 15 3.4286086534653803E-4 0.0 0.0 21.584805777891305 0.0 16 3.4286086534653803E-4 0.0 0.0 22.721732407380422 0.0 17 5.14291298019807E-4 0.0 0.0 24.098318781746773 0.0 18 5.14291298019807E-4 0.0 0.0 25.54073444225966 0.0 19 5.14291298019807E-4 0.0 0.0 26.66411806756759 0.0 20 5.14291298019807E-4 0.0 0.0 27.52041307877057 0.0 21 5.14291298019807E-4 0.0 0.0 28.542481318368598 0.0 22 5.14291298019807E-4 0.0 0.0 29.69089378684683 0.0 23 5.14291298019807E-4 0.0 0.0 30.91079274574981 0.0 24 5.14291298019807E-4 0.0 0.0 31.77548784815378 0.0 25 5.14291298019807E-4 0.0 0.0 32.562353534124085 0.0 26 5.14291298019807E-4 0.0 0.0 33.292132886014194 0.0 27 5.14291298019807E-4 0.0 0.0 34.044198194151825 0.0 28 5.14291298019807E-4 0.0 0.0 34.789063424117174 0.0 29 5.14291298019807E-4 0.0 0.0 35.55484316686867 0.0 30 5.14291298019807E-4 0.0 0.0 36.41525250845581 0.0 31 5.14291298019807E-4 0.0 0.0 37.22046125072215 0.0 32 5.14291298019807E-4 0.0 0.0 37.95966927640929 0.0 33 5.14291298019807E-4 0.0 0.0 38.6688769763786 0.0 34 5.14291298019807E-4 0.0 0.0 39.35322726361029 0.0 35 5.14291298019807E-4 0.0 0.0 40.05112055502317 0.0 36 5.14291298019807E-4 0.0 0.0 40.7243278641311 0.0 37 5.14291298019807E-4 0.0 0.0 41.40079235145981 0.0 38 5.14291298019807E-4 0.0 0.0 42.094742742921206 0.0 39 5.14291298019807E-4 0.0 0.0 42.77189295198062 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTG 40 6.8048394E-9 45.000004 34 TTAATCG 20 7.0304255E-4 45.000004 1 ACGTTAG 20 7.0304255E-4 45.000004 1 TAGCGAG 40 6.8048394E-9 45.000004 1 TCGTGCG 40 6.8048394E-9 45.000004 1 TTGCACG 20 7.0304255E-4 45.000004 1 CGATATT 20 7.0304255E-4 45.000004 10 TAATGCG 20 7.0304255E-4 45.000004 1 GCCCGAC 20 7.0304255E-4 45.000004 9 AATCGCG 30 2.1636552E-6 45.000004 1 GAGTACG 25 3.8884355E-5 45.0 1 GCGATAT 50 2.1827873E-11 45.0 9 TAGTGCG 25 3.8884355E-5 45.0 1 CGTTATT 130 0.0 44.999996 1 CGTTTTT 1405 0.0 42.43772 1 CGTGCGG 70 0.0 41.785713 2 AGCGATG 70 0.0 41.785713 1 GCGTCAT 70 0.0 41.785713 37 ATGGGCG 180 0.0 40.0 5 GGTCCGA 45 1.9255822E-8 40.0 8 >>END_MODULE