##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935870.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1050907 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.953433557869534 33.0 31.0 34.0 30.0 34.0 2 32.01742019036889 33.0 31.0 34.0 30.0 34.0 3 31.960051650621796 33.0 31.0 34.0 30.0 34.0 4 35.70946715551424 37.0 35.0 37.0 33.0 37.0 5 33.793153913714534 37.0 35.0 37.0 32.0 37.0 6 34.684883629093726 37.0 35.0 37.0 31.0 37.0 7 35.71439242482922 37.0 35.0 37.0 33.0 37.0 8 35.71882002879418 37.0 35.0 37.0 35.0 37.0 9 37.61205415893129 39.0 37.0 39.0 35.0 39.0 10 37.191755312315934 39.0 37.0 39.0 34.0 39.0 11 37.18985790369652 39.0 37.0 39.0 34.0 39.0 12 37.14120754738526 39.0 37.0 39.0 34.0 39.0 13 37.095236781180446 39.0 37.0 39.0 33.0 39.0 14 38.12283104023477 40.0 37.0 41.0 33.0 41.0 15 38.22706290851617 40.0 37.0 41.0 33.0 41.0 16 38.2402343880096 40.0 37.0 41.0 33.0 41.0 17 38.224504166401026 40.0 37.0 41.0 33.0 41.0 18 38.096430987708715 40.0 37.0 41.0 33.0 41.0 19 37.921118614682364 40.0 37.0 41.0 34.0 41.0 20 37.853460867612455 40.0 35.0 41.0 33.0 41.0 21 37.74953920756071 39.0 35.0 41.0 33.0 41.0 22 37.83329447800804 40.0 35.0 41.0 34.0 41.0 23 37.85281666217848 40.0 35.0 41.0 34.0 41.0 24 37.790462904900245 40.0 35.0 41.0 34.0 41.0 25 37.59604227586266 39.0 35.0 41.0 33.0 41.0 26 37.62638844350642 39.0 35.0 41.0 33.0 41.0 27 37.61627146836019 39.0 35.0 41.0 33.0 41.0 28 37.499197359994746 39.0 35.0 41.0 33.0 41.0 29 37.416045377944954 39.0 35.0 41.0 33.0 41.0 30 37.21045059172695 39.0 35.0 41.0 33.0 41.0 31 37.08664325197187 39.0 35.0 41.0 32.0 41.0 32 36.89689001976388 39.0 35.0 41.0 32.0 41.0 33 36.66903922040675 39.0 35.0 41.0 31.0 41.0 34 36.363212919887296 39.0 35.0 41.0 30.0 41.0 35 36.18893298836148 39.0 35.0 41.0 30.0 41.0 36 36.02306008048286 39.0 35.0 41.0 29.0 41.0 37 35.89995594281892 39.0 35.0 41.0 29.0 41.0 38 35.76001016264998 39.0 35.0 41.0 28.0 41.0 39 35.69632993214433 39.0 35.0 41.0 27.0 41.0 40 35.58704147940779 39.0 35.0 41.0 27.0 41.0 41 35.44708142585405 38.0 35.0 41.0 26.0 41.0 42 35.43625649082174 38.0 35.0 41.0 26.0 41.0 43 35.383648600684936 38.0 35.0 40.0 26.0 41.0 44 35.25219548447198 38.0 35.0 40.0 25.0 41.0 45 35.22306255453623 38.0 35.0 40.0 25.0 41.0 46 35.152061029187166 38.0 35.0 40.0 25.0 41.0 47 35.0882323554796 38.0 34.0 40.0 25.0 41.0 48 35.02312002869902 38.0 34.0 40.0 25.0 41.0 49 34.92975686716332 38.0 34.0 40.0 24.0 41.0 50 34.824565827423356 37.0 34.0 40.0 24.0 41.0 51 33.66476481743865 36.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 20.0 10 16.0 11 25.0 12 30.0 13 34.0 14 39.0 15 61.0 16 107.0 17 199.0 18 356.0 19 707.0 20 1154.0 21 1995.0 22 3015.0 23 4385.0 24 6603.0 25 10633.0 26 15406.0 27 17977.0 28 18224.0 29 17798.0 30 18940.0 31 22809.0 32 29331.0 33 41031.0 34 67704.0 35 79308.0 36 85682.0 37 123543.0 38 200814.0 39 282793.0 40 156.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.087929759721845 17.606600774378702 20.15982384740039 20.145645618499067 2 36.49951898693224 24.180350877860743 22.612657447328832 16.707472687878187 3 29.643346176207793 24.236778325770025 30.613460563113577 15.506414934908609 4 26.27996578193884 23.624259806053246 31.89587660944308 18.19989780256483 5 23.360297343152155 30.863720576606685 27.706162391153544 18.069819689087616 6 23.63196743384524 32.06135271722426 29.407264391616007 14.899415457314491 7 74.0353808662422 5.05858272901408 15.931476334252222 4.974560070491489 8 74.80604848954285 5.445772080688395 14.651344029490716 5.096835400278046 9 69.3393421111478 5.990825068250568 16.561408383424983 8.108424437176648 10 36.76985689504399 23.47362801846405 23.594095386175944 16.162419700316015 11 28.3435166004223 23.793256682085094 29.230940511386834 18.63228620610577 12 24.994314435054672 21.231469578183418 33.187522777943244 20.58669320881867 13 23.765946939167787 21.606288663031076 35.98253698947671 18.645227408324427 14 20.15316293449373 24.699426305086938 34.98359036527495 20.163820395144384 15 19.070764587161378 23.278843893893562 37.70143314298981 19.948958375955247 16 22.48267448975028 24.013352275700896 33.166398168439265 20.33757506610956 17 22.40959475957435 24.13981446502878 32.14737364961886 21.30321712577802 18 23.674787588245202 23.278368114400227 32.36461456627466 20.682229731079914 19 22.40331447026235 25.843200207059237 30.072499279194066 21.680986043484342 20 23.3459288024535 26.163685273768277 30.82375509916672 19.666630824611502 21 22.679171420496772 26.56714628411458 32.0245273844403 18.729154910948353 22 21.438814281377898 22.741308222326047 32.968378743314105 22.851498752981946 23 20.679375054119916 25.34639126012102 32.4584382823599 21.51579540339916 24 21.57926438780977 24.32822314438861 32.24671640782677 21.84579605997486 25 22.55565906402755 26.041885723475055 29.691399905034416 21.71105530746298 26 20.565854067010687 24.560974472527064 30.83431740391871 24.03885405654354 27 21.94437757099344 24.171406223386086 31.150425299289093 22.73379090633139 28 20.074469006296468 25.585042253976802 31.253764605240995 23.086724134485735 29 21.141927877538162 26.78124705611438 30.313624326415184 21.763200739932266 30 22.753963956848704 26.739473616599756 30.71289847722015 19.793663949331386 31 23.114890280491043 26.01657425442975 29.926530130639534 20.942005334439678 32 23.54442400707199 27.47388684250842 29.25101840600548 19.730670744414113 33 24.644901975150987 26.07595153519769 27.958896458011985 21.320250031639336 34 24.401302874564543 25.962525703987126 30.134065145631343 19.502106275816985 35 24.35715053758325 27.75002926043884 27.988204474801293 19.90461572717662 36 26.79647199990104 27.41803032999114 27.0915504416661 18.69394722844172 37 24.673734212446963 27.698169295665554 27.884103921660053 19.74399257022743 38 25.11868319461189 25.92788895687249 28.180324234209113 20.7731036143065 39 26.03931651421106 24.731874466532243 26.975174777596877 22.25363424165982 40 27.168721875484703 23.599233804703935 29.202108274090854 20.029936045720508 41 24.25952058555134 24.909911152937415 28.10810090712118 22.722467354390066 42 24.080722651956833 25.20441865931048 29.652195674783783 21.062663013948903 43 23.985281285594255 24.23163990724203 29.535249075322557 22.24782973184116 44 23.708377620474504 24.239442690932687 28.7116747723633 23.340504916229506 45 22.855209833029942 23.43242551434142 29.07098344572831 24.641381206900327 46 23.931423046948968 24.28892375823931 28.33247851617698 23.44717467863474 47 22.039343157862685 24.7784057009802 31.2084703974757 21.97378074368141 48 22.09700763245463 24.806096067492174 29.93166854916753 23.165227750885663 49 23.1266896119257 23.427001628117424 31.225122679742356 22.22118608021452 50 21.422352310908575 23.593238983087943 31.779691257171187 23.204717448832294 51 21.63378871774572 22.975391733045836 29.872291268399582 25.518528280808862 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 597.0 1 983.0 2 1369.0 3 13041.0 4 24713.0 5 16062.0 6 7411.0 7 7152.0 8 6893.0 9 6996.0 10 7099.0 11 6988.0 12 6877.0 13 6598.0 14 6319.0 15 6098.5 16 5878.0 17 5439.5 18 5001.0 19 4776.5 20 4552.0 21 4677.5 22 4803.0 23 4942.5 24 5082.0 25 5619.0 26 7109.0 27 8062.0 28 8899.5 29 9737.0 30 11589.0 31 13441.0 32 15007.5 33 16574.0 34 20102.5 35 23631.0 36 25517.5 37 27404.0 38 29224.0 39 31044.0 40 34553.5 41 38063.0 42 42072.0 43 46081.0 44 51402.5 45 56724.0 46 79751.0 47 102778.0 48 99787.0 49 96796.0 50 97207.5 51 97619.0 52 87067.5 53 76516.0 54 69409.0 55 62302.0 56 57430.5 57 52559.0 58 49469.5 59 46380.0 60 43272.5 61 40165.0 62 35646.5 63 31128.0 64 27823.0 65 24518.0 66 21531.0 67 18544.0 68 16105.0 69 13666.0 70 11400.5 71 9135.0 72 7636.0 73 6137.0 74 5058.5 75 3277.5 76 2575.0 77 1959.5 78 1344.0 79 1005.0 80 666.0 81 511.5 82 357.0 83 256.0 84 155.0 85 94.5 86 34.0 87 28.5 88 23.0 89 17.5 90 12.0 91 8.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1050907.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.408289880941325 #Duplication Level Percentage of deduplicated Percentage of total 1 73.20169033562648 25.91946671178763 2 9.361494640310003 6.629490318859502 3 3.885282505774313 4.127136277014209 4 2.160809246834996 3.060422407574081 5 1.5460483641425542 2.7371464323757344 6 1.2301336549076445 2.613415742716303 7 0.975748358596131 2.418470651241715 8 0.8474904870218001 2.400655106864643 9 0.7306857596114431 2.3285099869378008 >10 5.963745989210167 38.53616598316339 >50 0.06242833042529737 1.4922575502774293 >100 0.027984391129709626 1.800732815636227 >500 0.002690806837292284 0.7403012683107661 >1k 0.003228968204750741 2.9187115898882894 >5k 2.6908068372922845E-4 0.8460585923551613 >10k+ 2.6908068372922845E-4 1.431058564997131 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15020 1.4292415979720374 No Hit GAATCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTC 8880 0.8449843801592339 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTT 3739 0.3557879051143441 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGC 3382 0.32181724929037486 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCG 3345 0.3182964810397114 No Hit CGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTG 3184 0.302976381354392 No Hit GAACTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCT 2832 0.2694815050237557 No Hit CGTTCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTC 2663 0.2534001581491036 No Hit GCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC 2650 0.25216313146643804 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCT 2188 0.20820110628247793 No Hit CCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC 1859 0.17689481562117296 No Hit GAATGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTT 1823 0.17346920326917606 No Hit CGTCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCT 1550 0.1474916429331996 No Hit CTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGCT 1419 0.13502622020787758 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.709353919994823E-4 0.0 0.0 0.14301931569587034 0.0 2 5.709353919994823E-4 0.0 0.0 0.6520082176634089 0.0 3 5.709353919994823E-4 0.0 0.0 1.1371129890656357 0.0 4 5.709353919994823E-4 0.0 0.0 1.8052025536036966 0.0 5 5.709353919994823E-4 0.0 0.0 3.675586897794001 0.0 6 5.709353919994823E-4 0.0 0.0 5.282674870373877 0.0 7 5.709353919994823E-4 0.0 0.0 6.445289640282156 0.0 8 5.709353919994823E-4 0.0 0.0 7.959029676270117 0.0 9 5.709353919994823E-4 0.0 0.0 8.792500192690694 0.0 10 5.709353919994823E-4 0.0 0.0 10.272650196449353 0.0 11 5.709353919994823E-4 0.0 0.0 11.418993307685646 0.0 12 6.660912906660628E-4 0.0 0.0 12.621383243236556 0.0 13 6.660912906660628E-4 0.0 0.0 13.10991362699078 0.0 14 6.660912906660628E-4 0.0 0.0 13.398140844051852 0.0 15 6.660912906660628E-4 0.0 0.0 13.704733149555574 0.0 16 6.660912906660628E-4 0.0 0.0 14.160529904168495 0.0 17 6.660912906660628E-4 0.0 0.0 14.658004942397376 0.0 18 6.660912906660628E-4 0.0 0.0 15.208672127980877 0.0 19 6.660912906660628E-4 0.0 0.0 15.619460142524504 0.0 20 6.660912906660628E-4 0.0 0.0 15.97134665579352 0.0 21 6.660912906660628E-4 0.0 0.0 16.369669247611824 0.0 22 6.660912906660628E-4 0.0 0.0 16.82755943199541 0.0 23 6.660912906660628E-4 0.0 0.0 17.26803608692301 0.0 24 6.660912906660628E-4 0.0 0.0 17.65037248776533 0.0 25 6.660912906660628E-4 0.0 0.0 17.978850649962364 0.0 26 6.660912906660628E-4 0.0 0.0 18.312181762991397 0.0 27 6.660912906660628E-4 0.0 0.0 18.689760368900387 0.0 28 6.660912906660628E-4 0.0 0.0 19.014527451049428 0.0 29 6.660912906660628E-4 0.0 0.0 19.364130222750443 0.0 30 6.660912906660628E-4 0.0 0.0 19.798992679656717 0.0 31 8.564030879992235E-4 0.0 0.0 20.146026242093733 0.0 32 9.515589866658039E-4 0.0 0.0 20.5151359730214 0.0 33 9.515589866658039E-4 0.0 0.0 20.88776647219973 0.0 34 9.515589866658039E-4 0.0 0.0 21.262680712946054 0.0 35 9.515589866658039E-4 0.0 0.0 21.66823515306302 0.0 36 9.515589866658039E-4 0.0 0.0 22.008132023100046 0.0 37 9.515589866658039E-4 0.0 0.0 22.41654114017701 0.0 38 9.515589866658039E-4 0.0 0.0 22.849310167312616 0.0 39 0.0010467148853323842 0.0 0.0 23.454311371034734 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 7495 0.0 43.61908 1 TTAACGG 65 0.0 41.538464 2 CGGTCTA 65 0.0 41.538464 31 GTACGAG 60 3.6379788E-12 41.250004 1 CCATACG 100 0.0 40.500004 2 TTGCACG 50 1.0804797E-9 40.500004 1 CGTTATT 525 0.0 39.42857 1 GTTAACG 40 3.4578443E-7 39.375004 1 CTCACGA 75 0.0 39.000004 24 ACGTAAG 35 6.2477775E-6 38.571426 1 CGTAAGG 135 0.0 38.333332 2 TCCGAAC 125 0.0 37.800003 17 TCCGATC 30 1.1398552E-4 37.500004 14 GTTTTTT 9055 0.0 36.92435 2 TTACGGG 180 0.0 36.250004 3 CTAATCC 460 0.0 36.195656 11 AGGGCGA 790 0.0 36.170883 6 ACACCCG 25 0.0021070263 36.000004 12 AAGCGAC 25 0.0021070263 36.000004 15 CGTTTCT 420 0.0 35.892857 1 >>END_MODULE