##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935867.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1004191 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.916795709182814 33.0 31.0 34.0 30.0 34.0 2 31.95883552033428 33.0 31.0 34.0 30.0 34.0 3 31.98375109914349 33.0 31.0 34.0 30.0 34.0 4 35.690941265157726 37.0 35.0 37.0 33.0 37.0 5 33.59804857840789 37.0 35.0 37.0 32.0 37.0 6 34.5655816473161 37.0 35.0 37.0 30.0 37.0 7 35.683920688394934 37.0 35.0 37.0 32.0 37.0 8 35.69519344427504 37.0 35.0 37.0 35.0 37.0 9 37.58272778784116 39.0 37.0 39.0 35.0 39.0 10 37.188300831216374 39.0 37.0 39.0 34.0 39.0 11 37.16695927368399 39.0 37.0 39.0 34.0 39.0 12 37.07355971125015 39.0 37.0 39.0 33.0 39.0 13 36.99797648056993 39.0 37.0 39.0 33.0 39.0 14 37.922452003652694 40.0 37.0 41.0 33.0 41.0 15 38.04606792930827 40.0 37.0 41.0 33.0 41.0 16 38.09449098826817 40.0 37.0 41.0 33.0 41.0 17 38.108430567491645 40.0 37.0 41.0 33.0 41.0 18 38.0506915517068 40.0 37.0 41.0 33.0 41.0 19 37.944535451921 40.0 37.0 41.0 33.0 41.0 20 37.96636197695458 40.0 36.0 41.0 33.0 41.0 21 37.85505147925046 40.0 36.0 41.0 33.0 41.0 22 37.96070169917874 40.0 36.0 41.0 34.0 41.0 23 37.960889910385575 40.0 36.0 41.0 34.0 41.0 24 37.88511548101905 40.0 36.0 41.0 33.0 41.0 25 37.690942260984215 40.0 36.0 41.0 33.0 41.0 26 37.730498480866686 40.0 36.0 41.0 33.0 41.0 27 37.7362075541406 40.0 36.0 41.0 33.0 41.0 28 37.6177510055358 40.0 35.0 41.0 33.0 41.0 29 37.6128535308522 40.0 36.0 41.0 33.0 41.0 30 37.43248644929102 39.0 35.0 41.0 33.0 41.0 31 37.370238331154134 39.0 35.0 41.0 33.0 41.0 32 37.329915324873454 40.0 35.0 41.0 33.0 41.0 33 37.25418272021956 40.0 35.0 41.0 32.0 41.0 34 37.11983975160104 40.0 35.0 41.0 32.0 41.0 35 37.04502828645148 40.0 35.0 41.0 32.0 41.0 36 36.92119427479434 39.0 35.0 41.0 31.0 41.0 37 36.85236872268324 39.0 35.0 41.0 31.0 41.0 38 36.665308691274866 39.0 35.0 41.0 31.0 41.0 39 36.59977334989061 39.0 35.0 41.0 31.0 41.0 40 36.3849805465295 39.0 35.0 41.0 30.0 41.0 41 36.208479263407064 39.0 35.0 41.0 30.0 41.0 42 36.3121258804351 39.0 35.0 41.0 30.0 41.0 43 36.295428857657555 39.0 35.0 41.0 30.0 41.0 44 36.17479144903709 38.0 35.0 40.0 30.0 41.0 45 36.107350095748714 38.0 35.0 40.0 30.0 41.0 46 35.99021998803016 38.0 35.0 40.0 30.0 41.0 47 35.885698039516384 38.0 35.0 40.0 30.0 41.0 48 35.797246738917195 38.0 35.0 40.0 30.0 41.0 49 35.72335740909847 38.0 35.0 40.0 29.0 41.0 50 35.59844192987191 37.0 35.0 40.0 29.0 41.0 51 34.30017695836748 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 14.0 9 25.0 10 25.0 11 18.0 12 28.0 13 25.0 14 38.0 15 71.0 16 82.0 17 164.0 18 285.0 19 552.0 20 904.0 21 1544.0 22 2285.0 23 3338.0 24 4631.0 25 6536.0 26 8704.0 27 10543.0 28 11678.0 29 13389.0 30 16268.0 31 21099.0 32 28101.0 33 40726.0 34 67454.0 35 77935.0 36 84971.0 37 126816.0 38 202260.0 39 273544.0 40 135.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.646088244168695 18.490506288146378 22.514441973688275 14.348963493996662 2 32.1594198713193 25.096122152060712 24.85453464530154 17.889923331318442 3 31.936255154646876 25.319087703434906 26.115948061673528 16.628709080244693 4 27.879556777545307 24.90094015979032 27.559697308579743 19.65980575408463 5 24.81679282128599 32.44084043772549 23.79806232081347 18.944304420175044 6 25.220899211405 34.04133277434273 25.275171755174064 15.462596259078204 7 79.60069349356846 5.312037251877382 10.448709458658762 4.638559795895402 8 80.00689111931894 5.543865659023035 9.340055826033096 5.109187395624936 9 74.18240155508265 6.5000582558497335 11.239893605897683 8.077646583169935 10 40.70669822772759 26.969271781961794 17.306468590138728 15.01756140017188 11 31.144174763565896 23.556574396703418 24.097706512008173 21.201544327722516 12 27.071144832009047 20.218563998283194 29.94778881706767 22.762502352640084 13 27.055311190799358 20.656428906453055 33.46713921953094 18.821120683216638 14 22.576681129386742 25.96189370348868 30.82740235672297 20.634022810401607 15 19.479162828585398 25.557886896018783 33.75284183984919 21.210108435546623 16 25.341294634188117 24.21850026538776 28.901772670736943 21.538432429687184 17 25.63197638696224 24.402230253009638 26.79161633593609 23.174177024092028 18 24.220392335720994 23.675675245048 28.754191184744737 23.349741234486267 19 25.193215234950323 24.58566149268416 25.721202440571567 24.49992083179395 20 26.4460645434982 26.3728712963968 25.679776058538668 21.501288101566335 21 24.330431162995882 26.776977686515814 27.35445746874848 21.53813368173983 22 24.46795480142722 20.915742124755152 27.836636655775642 26.779666418041987 23 24.583570257052692 23.976713593330352 28.181391787020598 23.25832436259636 24 23.671194025837714 23.24657361000049 27.719627043062523 25.362605321099274 25 22.965053460945178 24.9099025982109 25.326058488873134 26.798985451970793 26 21.376511042222045 23.089830520289468 27.68616727295903 27.84749116452946 27 22.822949020654438 22.639916111576383 28.45066327023445 26.086471597534732 28 19.710792070432817 25.83801288798645 27.44448018355074 27.006714858029994 29 23.3760310538533 24.954316459717322 26.698008645765597 24.97164384066378 30 24.27008407763065 24.180559276073975 28.666060540275705 22.88329610601967 31 23.069913990465956 25.1698133124077 26.214335719001664 25.54593697812468 32 23.690712225064754 23.47800368654967 28.020964139292225 24.810319949093348 33 22.591618526754374 22.82643441337355 29.5337241620369 25.04822289783517 34 20.89911182235252 23.48288323635643 29.327787243661813 26.290217697629238 35 21.62118561110386 23.93180181857834 28.76375111906002 25.683261451257778 36 23.99194973864534 24.739516685570774 27.468678767286303 23.799854808497585 37 22.93448158766609 24.661344306013497 28.716051030132718 23.688123076187697 38 25.214625504510597 26.424355525990574 25.20237683866914 23.158642130829694 39 24.864990823458886 22.710420627151606 26.058090542536235 26.366498006853277 40 25.31321232713697 22.044710617800796 29.389528486114692 23.25254856894754 41 20.99978988061036 23.78093410516525 28.14275371916299 27.0765222950614 42 22.59819098159613 23.527595845810207 29.74752810969228 24.12668506290138 43 22.111829323306022 21.767074192061074 30.785478061444486 25.335618423188418 44 22.421630944710717 22.268871160964398 30.542396814948553 24.76710107937633 45 23.058959899063026 22.169487677145085 28.053627248202783 26.71792517558911 46 25.656971631890745 22.726353851010415 26.282848581594536 25.3338259355043 47 21.835188724057474 24.4922529678119 28.722125571728885 24.95043273640174 48 20.46493147220001 25.62839141159401 27.123624888094 26.78305222811198 49 21.709814168818482 21.907087396720346 28.630708699838976 27.752389734622195 50 20.712693103204472 23.332812184136284 28.732083836640637 27.222410876018603 51 21.015922269767405 22.697972796011914 26.94198613610359 29.34411879811709 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 556.0 1 937.5 2 1319.0 3 4829.0 4 8339.0 5 5434.5 6 2530.0 7 2419.5 8 2309.0 9 2344.0 10 2379.0 11 2375.5 12 2372.0 13 2335.5 14 2299.0 15 2235.0 16 2171.0 17 2263.0 18 2355.0 19 2283.0 20 2211.0 21 2227.0 22 2243.0 23 2531.0 24 2819.0 25 3161.5 26 4144.5 27 4785.0 28 5705.5 29 6626.0 30 8105.0 31 9584.0 32 11191.0 33 12798.0 34 15000.0 35 17202.0 36 18699.0 37 20196.0 38 23318.5 39 26441.0 40 29168.5 41 31896.0 42 36182.0 43 40468.0 44 46978.0 45 53488.0 46 72032.5 47 90577.0 48 91643.5 49 92710.0 50 95788.5 51 98867.0 52 93133.0 53 87399.0 54 82251.5 55 77104.0 56 71759.0 57 66414.0 58 60746.0 59 55078.0 60 49623.0 61 44168.0 62 40436.5 63 36705.0 64 32299.0 65 27893.0 66 24618.5 67 21344.0 68 18867.0 69 16390.0 70 13512.5 71 10635.0 72 9103.0 73 7571.0 74 6269.0 75 3914.5 76 2862.0 77 2133.0 78 1404.0 79 976.5 80 549.0 81 450.5 82 352.0 83 258.0 84 164.0 85 119.5 86 75.0 87 51.0 88 27.0 89 24.0 90 21.0 91 16.0 92 11.0 93 11.0 94 11.0 95 6.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1004191.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.607464426284476 #Duplication Level Percentage of deduplicated Percentage of total 1 71.54971185887753 22.615049722903763 2 10.477176666427626 6.623139775440179 3 4.018047395443946 3.810008703438586 4 2.086955623446709 2.6385350250930477 5 1.362836751626656 2.153790707293631 6 1.0080851822644832 1.9117809922253493 7 0.8036752320937774 1.7781495416082993 8 0.6880724439918865 1.7398580236944134 9 0.5889096080610892 1.675254553837921 >10 7.263245639488003 46.83616396855472 >50 0.1075842657562846 2.1731871646630774 >100 0.038400133577596786 2.2065827578946164 >500 0.003808277710117889 0.7974512648927568 >1k 0.002856208282588417 1.8311286591971416 >5k 6.347129516863148E-4 1.2099191392624444 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTC 7033 0.7003647712437177 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5029 0.5008011424121507 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGC 3773 0.37572533512051 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCG 3480 0.34654761892906827 No Hit GCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 2562 0.2551307470391589 TruSeq Adapter, Index 13 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCT 2249 0.22396137786536624 No Hit CCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 1386 0.13802155167692204 TruSeq Adapter, Index 13 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTT 1386 0.13802155167692204 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1313 0.13075201829134098 No Hit CGCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTG 1065 0.106055521310189 No Hit CTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGCT 1041 0.10366553773136784 Illumina Single End Adapter 2 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.970785438228385E-4 0.0 0.0 0.11053674052047867 0.0 2 6.970785438228385E-4 0.0 0.0 0.6069562463714572 0.0 3 6.970785438228385E-4 0.0 0.0 0.8996296521279319 0.0 4 6.970785438228385E-4 0.0 0.0 1.4362805482224 0.0 5 6.970785438228385E-4 0.0 0.0 3.007595168648195 0.0 6 6.970785438228385E-4 0.0 0.0 4.160065166885582 0.0 7 6.970785438228385E-4 0.0 0.0 5.154696666271655 0.0 8 6.970785438228385E-4 0.0 0.0 6.680402433401614 0.0 9 6.970785438228385E-4 0.0 0.0 7.499170974446097 0.0 10 6.970785438228385E-4 0.0 0.0 9.031250031119578 0.0 11 6.970785438228385E-4 0.0 0.0 10.273145248264523 0.0 12 7.966611929403868E-4 0.0 0.0 11.714604094241036 0.0 13 7.966611929403868E-4 0.0 0.0 12.252748730072268 0.0 14 7.966611929403868E-4 0.0 0.0 12.552691669214322 0.0 15 7.966611929403868E-4 0.0 0.0 12.90700673477456 0.0 16 7.966611929403868E-4 0.0 0.0 13.448736345974023 0.0 17 7.966611929403868E-4 0.0 0.0 14.068439171432527 0.0 18 7.966611929403868E-4 0.0 0.0 14.751177813782437 0.0 19 8.962438420579352E-4 0.0 0.0 15.244908588107242 0.0 20 8.962438420579352E-4 0.0 0.0 15.6787901903124 0.0 21 9.958264911754835E-4 0.0 0.0 16.18277797749631 0.0 22 9.958264911754835E-4 0.0 0.0 16.757768193501036 0.0 23 9.958264911754835E-4 0.0 0.0 17.283166250245223 0.0 24 9.958264911754835E-4 0.0 0.0 17.722823646099197 0.0 25 0.0010954091402930318 0.0 0.0 18.104324774868527 0.0 26 0.0010954091402930318 0.0 0.0 18.487419226023736 0.0 27 0.0010954091402930318 0.0 0.0 18.923690811807713 0.0 28 0.0011949917894105802 0.0 0.0 19.313656465752032 0.0 29 0.0011949917894105802 0.0 0.0 19.73050943495809 0.0 30 0.0011949917894105802 0.0 0.0 20.31018003547134 0.0 31 0.0012945744385281287 0.0 0.0 20.757903625903836 0.0 32 0.0012945744385281287 0.0 0.0 21.2542235491057 0.0 33 0.0012945744385281287 0.0 0.0 21.725946557975526 0.0 34 0.0012945744385281287 0.0 0.0 22.19527958326653 0.0 35 0.001394157087645677 0.0 0.0 22.708827304765727 0.0 36 0.001394157087645677 0.0 0.0 23.1388251836553 0.0 37 0.0014937397367632253 0.0 0.0 23.57390177764987 0.0 38 0.0014937397367632253 0.0 0.0 24.08525868086848 0.0 39 0.0014937397367632253 0.0 0.0 24.892276469317093 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATCG 25 3.890453E-5 45.0 34 CTCGTAC 50 2.1827873E-11 45.0 29 ATTCACG 20 7.032862E-4 45.0 22 TCGTATC 25 3.890453E-5 45.0 33 CGGTCTA 90 0.0 45.0 31 ATAACGG 60 0.0 44.999996 2 CGTTTTT 2375 0.0 42.06316 1 CGTAAGG 180 0.0 41.25 2 ACGTAAG 60 3.6379788E-12 41.249996 1 TTGTACG 45 1.9279469E-8 40.0 1 GCGATAT 90 0.0 40.0 9 TTTAGCG 85 0.0 39.705883 1 CCCTCGT 35 6.247501E-6 38.571426 27 CACGGGT 70 0.0 38.571426 4 TACACGG 100 0.0 38.25 2 CGGGTAC 130 0.0 38.076927 6 ACGATAG 30 1.1398192E-4 37.499996 1 TCGTACG 60 1.546141E-10 37.499996 30 TAGACGG 170 0.0 37.058823 2 ATGGGAC 770 0.0 36.818184 5 >>END_MODULE