##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935865.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1209926 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.904975180300283 33.0 31.0 34.0 30.0 34.0 2 31.975902658509693 33.0 31.0 34.0 30.0 34.0 3 31.890709018568078 33.0 31.0 34.0 30.0 34.0 4 35.6709997140321 37.0 35.0 37.0 33.0 37.0 5 33.513204113309406 37.0 35.0 37.0 32.0 37.0 6 34.54157692288619 37.0 35.0 37.0 30.0 37.0 7 35.69368126645762 37.0 35.0 37.0 32.0 37.0 8 35.72080937181282 37.0 35.0 37.0 35.0 37.0 9 37.63588516983683 39.0 37.0 39.0 35.0 39.0 10 37.18456583295177 39.0 37.0 39.0 34.0 39.0 11 37.214209794648596 39.0 37.0 39.0 34.0 39.0 12 37.30393924917722 39.0 37.0 39.0 34.0 39.0 13 37.34508143473237 39.0 37.0 39.0 34.0 39.0 14 38.50674173461848 40.0 38.0 41.0 34.0 41.0 15 38.54841039865248 40.0 38.0 41.0 34.0 41.0 16 38.52376674275948 40.0 38.0 41.0 34.0 41.0 17 38.47609109978627 40.0 38.0 41.0 34.0 41.0 18 38.30349211439377 40.0 38.0 41.0 34.0 41.0 19 38.063689845494686 40.0 37.0 41.0 34.0 41.0 20 37.9498919768647 40.0 36.0 41.0 34.0 41.0 21 37.86177336465205 39.0 36.0 41.0 34.0 41.0 22 37.94930268462699 40.0 36.0 41.0 34.0 41.0 23 37.925096245555515 40.0 36.0 41.0 34.0 41.0 24 37.848046078851105 40.0 35.0 41.0 34.0 41.0 25 37.659220481252575 39.0 35.0 41.0 33.0 41.0 26 37.698034425245844 39.0 35.0 41.0 33.0 41.0 27 37.69071496934523 40.0 35.0 41.0 33.0 41.0 28 37.54174966072305 39.0 35.0 41.0 33.0 41.0 29 37.50203648818192 40.0 35.0 41.0 33.0 41.0 30 37.280982473308285 39.0 35.0 41.0 33.0 41.0 31 37.107777665741544 39.0 35.0 41.0 32.0 41.0 32 36.7954593917314 39.0 35.0 41.0 31.0 41.0 33 36.414220373807986 39.0 35.0 41.0 30.0 41.0 34 36.05099650722441 39.0 35.0 41.0 27.0 41.0 35 35.84093159416361 39.0 35.0 41.0 25.0 41.0 36 35.66912604572511 39.0 35.0 41.0 24.0 41.0 37 35.61297054530608 39.0 35.0 41.0 23.0 41.0 38 35.4431006524366 39.0 35.0 41.0 23.0 41.0 39 35.345802139965585 39.0 35.0 41.0 23.0 41.0 40 35.23781041154583 39.0 35.0 41.0 22.0 41.0 41 35.109434791879835 39.0 35.0 41.0 21.0 41.0 42 35.10091360959265 39.0 35.0 41.0 21.0 41.0 43 35.012549527822365 39.0 35.0 41.0 21.0 41.0 44 34.86927051737048 39.0 35.0 41.0 21.0 41.0 45 34.789293725401386 39.0 34.0 41.0 20.0 41.0 46 34.650649709155765 38.0 34.0 40.0 20.0 41.0 47 34.53273423333328 38.0 34.0 40.0 20.0 41.0 48 34.4516408441508 38.0 34.0 40.0 20.0 41.0 49 34.33761320940289 38.0 34.0 40.0 19.0 41.0 50 34.22251608776074 38.0 34.0 40.0 18.0 41.0 51 32.947969545244916 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 11.0 10 7.0 11 14.0 12 16.0 13 25.0 14 40.0 15 47.0 16 82.0 17 197.0 18 394.0 19 768.0 20 1416.0 21 2426.0 22 3820.0 23 6091.0 24 9932.0 25 17280.0 26 25309.0 27 27263.0 28 24785.0 29 22735.0 30 23180.0 31 26206.0 32 31390.0 33 40522.0 34 60787.0 35 76595.0 36 89574.0 37 136084.0 38 231852.0 39 350874.0 40 196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.22475258817481 17.080052829677186 20.501667044100216 21.193527538047782 2 38.088279779093924 23.811042989405966 21.884644184850973 16.216033046649134 3 28.168582210812893 24.344464041602546 32.75117651823335 14.735777229351216 4 23.957002329068057 22.812800121660334 35.743673580037125 17.486523969234483 5 22.5225344359903 31.071569666244052 29.936954822030437 16.46894107573521 6 21.801663903412276 32.11055882756466 31.85269181751611 14.23508545150695 7 72.28508189757059 4.3363809026337155 18.962729952079712 4.415807247715977 8 72.87577917988372 5.1534556658836985 17.02228070146439 4.948484452768185 9 66.94938368131605 6.0178060476425825 19.009592322175077 8.023217948866295 10 30.829654044958122 28.91358645074161 25.97365458714004 14.283104917160221 11 23.5761525911502 22.988678646462677 35.50960967860844 17.925559083778676 12 20.112221739180743 21.14550807239451 37.97670270743831 20.76556748098644 13 20.359757538890808 22.265080674355293 40.686207255650345 16.688954531103555 14 18.5003876270119 25.774964749910325 37.30451283797522 18.42013478510256 15 17.311141342528387 24.94359159155188 40.18369718478651 17.561569881133227 16 20.03221684631953 25.86389580850399 35.62449273757238 18.479394607604103 17 19.799640639179586 26.170856730081017 35.453325244684386 18.576177386055015 18 21.040708274720934 23.910222608655403 35.848473377710704 19.20059573891296 19 18.79544699427899 27.081738883204427 33.927364152849016 20.195449969667568 20 20.199747753168378 26.171931175956214 34.996851047088825 18.631470023786576 21 19.262996249357396 28.208749956608912 35.27339688542936 17.254856908604328 22 19.915680793701434 22.942560123511686 35.71491149045479 21.426847592332095 23 17.911178038987508 27.22769822286652 35.43729120623906 19.42383253190691 24 18.68535761691211 24.794574213629595 35.843018498651986 20.677049670806312 25 19.016286946474413 28.212303892965355 33.274844907870396 19.496564252689836 26 19.595247973843026 25.649006633463532 33.927281503166306 20.82846388952713 27 21.0939346703848 24.787301041551302 33.02210217814974 21.09666210991416 28 18.738914611306807 25.99572205242304 33.996872536006336 21.268490800263816 29 21.01988055467855 24.185198103024483 32.6950573836747 22.09986395862226 30 20.79780085724251 24.617703892634758 32.95432943832929 21.630165811793447 31 20.36157583191038 25.65528800934933 30.95503361362596 23.02810254511433 32 20.668371454121985 26.33293275787114 30.858498784223166 22.1401970037837 33 18.768089949302684 26.862056026566915 29.545360625360562 24.824493398769842 34 18.962977901127836 27.665576241852808 30.82775310225584 22.543692754763516 35 18.099040767782494 26.944127161495828 30.935280339458775 24.021551731262903 36 18.949836601577285 30.81849633779256 28.92664510060946 21.305021960020696 37 17.80332020305374 28.15858159920524 30.041010772559645 23.997087425181373 38 18.30954950963943 29.62883680489551 30.21333536100555 21.848278324459514 39 19.226795688331354 27.32390245353848 29.587429313858866 23.861872544271304 40 20.515304241747014 26.401118746105134 32.30065309779276 20.78292391435509 41 18.636759603479884 27.650864598330806 30.60063177417462 23.11174402401469 42 20.589275707770557 26.41822723042566 32.17014924879704 20.822347813006743 43 20.531586229240467 26.580964455677453 30.75832736878123 22.12912194630085 44 20.924337521468257 25.914477414321208 30.29391880164572 22.86726626256482 45 20.003454756737188 24.535880706753968 30.61848410563952 24.842180430869327 46 21.741908182814488 25.360641890495785 29.254103143498035 23.6433467831917 47 19.068438896263075 25.30758079419733 32.638194401971695 22.9857859075679 48 19.428130315407717 25.731656316171403 30.96296798316591 23.877245385254966 49 20.22983223767404 24.313470410587094 32.52455108824837 22.932146263490495 50 18.83578003944043 24.53455831183064 32.88978003613444 23.73988161259449 51 19.070091889917233 23.475650576977436 30.940900517882913 26.513357015222418 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 358.0 1 681.5 2 1005.0 3 16500.5 4 31996.0 5 21871.0 6 11746.0 7 11362.5 8 10979.0 9 11208.0 10 11437.0 11 11129.0 12 10821.0 13 10513.0 14 10205.0 15 9788.5 16 9372.0 17 8862.5 18 8353.0 19 7935.5 20 7518.0 21 7475.5 22 7433.0 23 7584.5 24 7736.0 25 8536.0 26 10269.0 27 11202.0 28 13174.0 29 15146.0 30 17814.0 31 20482.0 32 22982.0 33 25482.0 34 29187.0 35 32892.0 36 36032.0 37 39172.0 38 42827.0 39 46482.0 40 50294.0 41 54106.0 42 57913.0 43 61720.0 44 70092.0 45 78464.0 46 107375.5 47 136287.0 48 129202.5 49 122118.0 50 120348.5 51 118579.0 52 103196.0 53 87813.0 54 76273.5 55 64734.0 56 55723.5 57 46713.0 58 40847.0 59 34981.0 60 29816.5 61 24652.0 62 21186.5 63 17721.0 64 14557.0 65 11393.0 66 9522.5 67 7652.0 68 6190.0 69 4728.0 70 3882.5 71 3037.0 72 2750.5 73 2464.0 74 2028.5 75 1296.5 76 1000.0 77 777.0 78 554.0 79 406.5 80 259.0 81 178.0 82 97.0 83 69.0 84 41.0 85 29.5 86 18.0 87 12.0 88 6.0 89 7.0 90 8.0 91 12.5 92 17.0 93 11.5 94 6.0 95 9.0 96 12.0 97 6.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1209926.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.03493709482782 #Duplication Level Percentage of deduplicated Percentage of total 1 74.1807229609958 28.956398544313206 2 9.371550353823011 7.316357570849854 3 3.969432749160031 4.648396729968338 4 2.3508980160376263 3.6706862468953707 5 1.6439392368283785 3.208553234865751 6 1.2399917433587035 2.9041799820067724 7 0.9928121576553425 2.7128052084739602 8 0.8557249652374777 2.6722536150814933 9 0.6833315366950122 2.4006423194821647 >10 4.604018935824528 31.282714291481785 >50 0.07706311795861233 1.9723758201450474 >100 0.025536728795163124 1.7670827494131605 >500 0.001082064702242295 0.31281705409126304 >1k 0.0030297811662784255 2.6806976984817847 >5k 4.32825880896918E-4 0.9670887483761218 >10k+ 4.32825880896918E-4 2.526950186073981 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17969 1.4851321485776816 No Hit GAATCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTC 11944 0.9871678102627764 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGC 6093 0.5035845167390403 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCG 5355 0.4425890509006336 No Hit GAACTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCT 4592 0.3795273429945302 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTT 3760 0.310762806981584 No Hit CGCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTG 3187 0.2634045387899756 No Hit GCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGC 3054 0.2524121309898291 TruSeq Adapter, Index 13 (95% over 22bp) CGTTCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTC 2829 0.2338159523805588 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCT 2611 0.2157983215502436 No Hit CGTCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCT 2026 0.16744825716614073 No Hit CCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGC 1726 0.14265335235378032 TruSeq Adapter, Index 13 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTT 1594 0.13174359423634172 No Hit CTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGCT 1544 0.12761111010094833 Illumina PCR Primer Index 1 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTC 1336 0.11041997609771176 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCT 1213 0.10025406512464399 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6529936541573618E-4 0.0 0.0 0.14306660076731964 0.0 2 1.6529936541573618E-4 0.0 0.0 0.6320221236670672 0.0 3 1.6529936541573618E-4 0.0 0.0 1.0887442703107464 0.0 4 1.6529936541573618E-4 0.0 0.0 1.9287956453535176 0.0 5 1.6529936541573618E-4 0.0 0.0 3.9550352666196114 0.0 6 1.6529936541573618E-4 0.0 0.0 5.7043158011316395 0.0 7 2.4794904812360424E-4 0.0 0.0 7.072498648677688 0.0 8 2.4794904812360424E-4 0.0 0.0 8.988566242894194 0.0 9 2.4794904812360424E-4 0.0 0.0 10.016232397683826 0.0 10 3.3059873083147236E-4 0.0 0.0 11.836013111545665 0.0 11 3.3059873083147236E-4 0.0 0.0 12.968479064008873 0.0 12 3.3059873083147236E-4 0.0 0.0 14.534525251957557 0.0 13 3.3059873083147236E-4 0.0 0.0 15.243576879908359 0.0 14 3.3059873083147236E-4 0.0 0.0 15.672032835065947 0.0 15 3.3059873083147236E-4 0.0 0.0 16.081314063835308 0.0 16 3.3059873083147236E-4 0.0 0.0 16.578286605957718 0.0 17 3.3059873083147236E-4 0.0 0.0 17.1159227919724 0.0 18 3.3059873083147236E-4 0.0 0.0 17.718191029864638 0.0 19 3.3059873083147236E-4 0.0 0.0 18.24334711379043 0.0 20 3.3059873083147236E-4 0.0 0.0 18.67643145117966 0.0 21 3.3059873083147236E-4 0.0 0.0 19.133897444967708 0.0 22 4.132484135393404E-4 0.0 0.0 19.667814395260535 0.0 23 4.132484135393404E-4 0.0 0.0 20.1968550142736 0.0 24 4.132484135393404E-4 0.0 0.0 20.621922332440167 0.0 25 4.132484135393404E-4 0.0 0.0 21.061535994763315 0.0 26 4.132484135393404E-4 0.0 0.0 21.465114395425836 0.0 27 4.132484135393404E-4 0.0 0.0 21.90456275838357 0.0 28 4.132484135393404E-4 0.0 0.0 22.353763783900835 0.0 29 4.132484135393404E-4 0.0 0.0 22.822718083585276 0.0 30 4.132484135393404E-4 0.0 0.0 23.373743518198633 0.0 31 4.958980962472085E-4 0.0 0.0 23.856830913626123 0.0 32 4.958980962472085E-4 0.0 0.0 24.344050793189005 0.0 33 4.958980962472085E-4 0.0 0.0 24.808789959055346 0.0 34 5.785477789550766E-4 0.0 0.0 25.271462882853992 0.0 35 5.785477789550766E-4 0.0 0.0 25.742566074288842 0.0 36 5.785477789550766E-4 0.0 0.0 26.187717265353417 0.0 37 5.785477789550766E-4 0.0 0.0 26.665597730770312 0.0 38 6.611974616629447E-4 0.0 0.0 27.145957686668442 0.0 39 8.264968270786808E-4 0.0 0.0 27.739382408510934 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGCG 40 6.8157533E-9 45.0 1 CCGACTT 25 3.8909282E-5 45.0 44 CGTTATT 880 0.0 44.74432 1 CGTTTTT 12285 0.0 43.9011 1 CGTAAGG 145 0.0 41.89655 2 CGTTTCT 505 0.0 41.88119 1 CTATGCG 45 1.9284926E-8 40.0 1 TCAACGG 45 1.9284926E-8 40.0 2 CATACGG 75 0.0 39.0 2 TTAACGG 105 0.0 38.57143 2 ACTTGCG 35 6.2485615E-6 38.571426 1 TACGGCT 915 0.0 38.11475 7 CGCTAGG 130 0.0 38.07692 2 GTTTTTT 14255 0.0 37.565765 2 GCGAGAC 240 0.0 37.499996 21 GTAACCG 30 1.13995746E-4 37.499996 1 CGTTCTG 355 0.0 37.394367 1 CGCATGG 170 0.0 37.058823 2 CAAGGGA 1230 0.0 36.585365 4 GACACGA 240 0.0 36.5625 25 >>END_MODULE