##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935864.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 312476 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10177101601403 33.0 31.0 34.0 30.0 34.0 2 32.210137738578325 33.0 31.0 34.0 30.0 34.0 3 32.15472548291709 33.0 31.0 34.0 30.0 34.0 4 35.77597639498713 37.0 35.0 37.0 35.0 37.0 5 32.243442696399086 37.0 35.0 37.0 0.0 37.0 6 33.97010330393374 37.0 35.0 37.0 18.0 37.0 7 35.586297827673164 37.0 35.0 37.0 32.0 37.0 8 35.81234398801828 37.0 35.0 37.0 35.0 37.0 9 37.754054711401835 39.0 38.0 39.0 35.0 39.0 10 37.394523099374034 39.0 37.0 39.0 34.0 39.0 11 37.403563793699355 39.0 37.0 39.0 35.0 39.0 12 37.313617685838274 39.0 37.0 39.0 35.0 39.0 13 37.22190184206147 39.0 37.0 39.0 34.0 39.0 14 38.4365679284169 40.0 38.0 41.0 34.0 41.0 15 38.59328396420845 40.0 38.0 41.0 35.0 41.0 16 38.52769492697039 40.0 38.0 41.0 34.0 41.0 17 38.532344884087095 40.0 38.0 41.0 34.0 41.0 18 38.45397406520821 40.0 38.0 41.0 34.0 41.0 19 38.34835955401375 40.0 37.0 41.0 34.0 41.0 20 38.464336461040205 40.0 38.0 41.0 34.0 41.0 21 38.37711376233695 40.0 37.0 41.0 34.0 41.0 22 38.45247955042947 40.0 38.0 41.0 34.0 41.0 23 38.466086995481255 40.0 38.0 41.0 34.0 41.0 24 38.437297584454484 40.0 37.0 41.0 34.0 41.0 25 38.15084038454153 40.0 37.0 41.0 34.0 41.0 26 38.21240991308132 40.0 37.0 41.0 34.0 41.0 27 38.18279803888939 40.0 37.0 41.0 34.0 41.0 28 38.113688731294566 40.0 37.0 41.0 34.0 41.0 29 38.088537999718376 40.0 37.0 41.0 34.0 41.0 30 37.96372521409644 40.0 37.0 41.0 34.0 41.0 31 37.92568389252295 40.0 37.0 41.0 34.0 41.0 32 37.8886506483698 40.0 37.0 41.0 34.0 41.0 33 37.85167820888644 40.0 37.0 41.0 34.0 41.0 34 37.78446984728427 40.0 36.0 41.0 33.0 41.0 35 37.80564907384887 40.0 37.0 41.0 33.0 41.0 36 37.710156940053 40.0 36.0 41.0 33.0 41.0 37 37.64868021864079 40.0 36.0 41.0 33.0 41.0 38 37.532364085561774 40.0 36.0 41.0 33.0 41.0 39 37.465664563038445 40.0 36.0 41.0 33.0 41.0 40 37.40588397188904 40.0 36.0 41.0 33.0 41.0 41 37.29275208336 40.0 35.0 41.0 33.0 41.0 42 37.29453142001306 40.0 35.0 41.0 33.0 41.0 43 37.23490764090682 40.0 35.0 41.0 33.0 41.0 44 37.17978980785724 39.0 35.0 41.0 33.0 41.0 45 37.13226935828671 39.0 35.0 41.0 33.0 41.0 46 37.027560516647675 39.0 35.0 41.0 32.0 41.0 47 36.95648625814462 39.0 35.0 41.0 32.0 41.0 48 36.92834969725675 39.0 35.0 41.0 32.0 41.0 49 36.898757024539485 39.0 35.0 41.0 32.0 41.0 50 36.764980350490916 39.0 35.0 41.0 32.0 41.0 51 35.77284335436961 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 7.0 9 7.0 10 12.0 11 8.0 12 7.0 13 6.0 14 6.0 15 9.0 16 15.0 17 32.0 18 60.0 19 101.0 20 176.0 21 332.0 22 493.0 23 684.0 24 1038.0 25 1378.0 26 1819.0 27 2217.0 28 2554.0 29 3048.0 30 3840.0 31 4982.0 32 6677.0 33 10181.0 34 17657.0 35 24173.0 36 22901.0 37 36667.0 38 61854.0 39 109457.0 40 74.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.315646641662084 21.14242373814309 24.356430573868074 11.185499046326758 2 33.12318386052049 24.04824690536233 24.055927495231632 18.772641738885547 3 32.36952597959523 24.913593363970353 25.373788706972693 17.34309194946172 4 29.293769761517684 25.725495718071144 24.943355649713897 20.03737887069727 5 23.181940373020648 36.462320306199516 21.959766510067976 18.395972810711864 6 25.462435515047556 35.14797936481522 24.2217002265774 15.167884893559824 7 81.1127894622307 5.515303575314584 8.8109166784009 4.5609902840538155 8 81.38289020596781 5.585068933294076 7.93628950703414 5.095751353703965 9 75.11040847937122 7.998694299722218 10.101575801021518 6.789321419885047 10 37.231339366863374 32.09782511296868 16.790729528027754 13.880105992140196 11 32.32760275989196 25.864066360296473 23.09009331916691 18.718237560644656 12 30.513383427847256 23.008167027227692 27.201769095866563 19.276680449058485 13 25.763578642839768 25.10784828274811 29.163199733739553 19.965373340672564 14 20.285397918560143 29.029109435604656 28.901419629027508 21.78407301680769 15 19.732075423392516 26.549879030709562 33.71682945250195 20.001216093395975 16 22.23946799114172 24.776942869212355 32.53657880925255 20.447010330393375 17 22.043292924896633 24.19673830950217 28.79165119881207 24.968317566789132 18 23.646616060113416 24.41915539113404 29.145598381955732 22.78863016679681 19 24.471639421907604 26.899665894340686 26.544438612885468 22.084256070866243 20 27.46546934804593 25.86790665523112 26.955350170893123 19.71127382582982 21 25.74917753683483 25.915270292758485 27.64276296419565 20.69278920621104 22 22.605256083667225 25.648689819378127 26.8167795286678 24.929274568286843 23 22.371318117231404 27.782293680154634 27.63732254637156 22.209065656242398 24 23.080172557252396 24.951676288738973 28.553552912863704 23.414598241144922 25 22.284271432045983 27.346420205071748 26.345063300861504 24.024245062020764 26 21.949525723575572 28.348417158437766 26.87502400184334 22.82703311614332 27 24.08408965808574 27.983269115068037 26.92942818008423 21.003213046761992 28 20.89344461654655 27.76053200885828 28.91422061214301 22.431802762452158 29 21.549495001216094 27.92182439611362 28.726366184923002 21.802314417747283 30 24.346509811953556 25.38370946888721 27.154725482917087 23.115055236242142 31 23.42131875728056 26.81453935662259 26.387626569720556 23.3765153163763 32 24.24954236485362 27.39890423584531 26.80685876675329 21.544694632547778 33 23.309630179597793 26.396587257901405 26.845261716099795 23.448520846401003 34 21.742469821682306 25.91175002240172 29.57059102139044 22.77518913452553 35 22.235627696207068 25.411871631741317 27.62292144036662 24.72957923168499 36 22.633098221943445 27.22929120956489 27.474110011648893 22.663500556842767 37 22.95440289814258 26.804938619285963 29.076473073132014 21.164185409439444 38 21.37284143422215 26.494514778735006 27.96662783701788 24.166015950024963 39 22.68654232645067 23.51252576197852 28.917100833344 24.88383107822681 40 24.612450236178137 23.246585337753938 28.883178228087917 23.257786197980003 41 20.22139300298263 26.03911980440098 28.669721834636903 25.069765357979495 42 22.381878928301692 25.973834790511912 28.396740869698796 23.247545411487604 43 23.162418873769504 24.88191093075948 29.054071352679884 22.901598842791127 44 22.814872182183592 25.35170701109845 27.758611861390953 24.074808945327 45 22.28139121084499 24.094650469156033 27.91062353588756 25.713334784111417 46 22.395639985150858 25.641009229508825 27.092640714806898 24.870710070533416 47 21.210908997811032 25.97255469220036 29.643556625148808 23.172979684839795 48 21.445807037980515 24.152574917753682 29.59107259437525 24.81054544989055 49 21.915923142897377 24.147454524507484 30.035906757638987 23.90071557495616 50 20.206031823244025 24.960957001497714 29.889015476388586 24.943995698869674 51 20.718711197019932 23.56564984190786 27.337779541468787 28.377859419603425 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 123.0 1 332.0 2 541.0 3 794.0 4 1047.0 5 767.0 6 487.0 7 498.5 8 510.0 9 519.5 10 529.0 11 533.0 12 537.0 13 520.5 14 504.0 15 574.0 16 644.0 17 617.0 18 590.0 19 651.5 20 713.0 21 856.0 22 999.0 23 1196.0 24 1393.0 25 1527.0 26 2023.5 27 2386.0 28 3106.5 29 3827.0 30 4147.5 31 4468.0 32 5220.0 33 5972.0 34 6873.5 35 7775.0 36 8834.0 37 9893.0 38 10752.5 39 11612.0 40 12806.5 41 14001.0 42 15545.0 43 17089.0 44 19204.5 45 21320.0 46 24068.0 47 26816.0 48 28548.5 49 30281.0 50 30725.5 51 31170.0 52 27353.5 53 23537.0 54 21396.0 55 19255.0 56 17308.5 57 15362.0 58 14712.5 59 14063.0 60 13815.0 61 13567.0 62 12309.5 63 11052.0 64 9163.0 65 7274.0 66 5761.0 67 4248.0 68 3540.5 69 2833.0 70 2303.5 71 1774.0 72 1519.0 73 1264.0 74 907.5 75 463.5 76 376.0 77 315.0 78 254.0 79 187.0 80 120.0 81 71.0 82 22.0 83 17.0 84 12.0 85 9.0 86 6.0 87 6.5 88 7.0 89 6.0 90 5.0 91 3.0 92 1.0 93 2.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 312476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.307420175267936 #Duplication Level Percentage of deduplicated Percentage of total 1 69.00141322374354 22.982590629305154 2 11.58580218079854 7.717863626067851 3 4.336355851090785 4.332984790852871 4 2.3393531755402353 3.1167127662426375 5 1.5264814386467578 2.542157933337752 6 1.180227437391789 2.3586198695752825 7 0.9577442277850543 2.2329992590692025 8 0.7761712277616544 2.0681808968808806 9 0.669422664199778 2.006706775621437 >10 7.519282453266195 46.67362616726379 >50 0.08280488834611524 1.8525236070553501 >100 0.02194828365800645 1.371698197295872 >500 0.0029929477715463343 0.7433354814318957 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC 916 0.2931425133450249 No Hit CCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC 813 0.26017998182260393 No Hit CTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT 508 0.16257248556689152 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 449 0.14369103547152423 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.200245778875818E-4 0.0 0.0 0.16993305085830593 0.0 2 3.200245778875818E-4 0.0 0.0 0.9171904402258093 0.0 3 3.200245778875818E-4 0.0 0.0 1.2471357800279061 0.0 4 3.200245778875818E-4 0.0 0.0 1.6295651506035664 0.0 5 3.200245778875818E-4 0.0 0.0 2.7893342208681626 0.0 6 3.200245778875818E-4 0.0 0.0 3.500748857512257 0.0 7 3.200245778875818E-4 0.0 0.0 4.139197890397982 0.0 8 3.200245778875818E-4 0.0 0.0 5.244242757843803 0.0 9 3.200245778875818E-4 0.0 0.0 5.6583545616303335 0.0 10 3.200245778875818E-4 0.0 0.0 6.699074488920749 0.0 11 3.200245778875818E-4 0.0 0.0 8.060459043254522 0.0 12 3.200245778875818E-4 0.0 0.0 9.20422688462474 0.0 13 3.200245778875818E-4 0.0 0.0 9.677863259898361 0.0 14 3.200245778875818E-4 0.0 0.0 9.84203586835469 0.0 15 3.200245778875818E-4 0.0 0.0 10.229585632176551 0.0 16 3.200245778875818E-4 0.0 0.0 10.975562923232504 0.0 17 3.200245778875818E-4 0.0 0.0 11.792265646001614 0.0 18 3.200245778875818E-4 0.0 0.0 12.712976356584186 0.0 19 3.200245778875818E-4 0.0 0.0 13.24453718045546 0.0 20 3.200245778875818E-4 0.0 0.0 13.76457711952278 0.0 21 3.200245778875818E-4 0.0 0.0 14.420307479614435 0.0 22 3.200245778875818E-4 0.0 0.0 15.119881206876688 0.0 23 3.200245778875818E-4 0.0 0.0 15.788412550083846 0.0 24 3.200245778875818E-4 0.0 0.0 16.32765396382442 0.0 25 3.200245778875818E-4 0.0 0.0 16.783688987314225 0.0 26 3.200245778875818E-4 0.0 0.0 17.22788310142219 0.0 27 3.200245778875818E-4 0.0 0.0 17.683278075756217 0.0 28 3.200245778875818E-4 0.0 0.0 18.149233861160535 0.0 29 3.200245778875818E-4 0.0 0.0 18.648152178087276 0.0 30 3.200245778875818E-4 0.0 0.0 19.207235115656882 0.0 31 6.400491557751636E-4 0.0 0.0 19.712553924141375 0.0 32 6.400491557751636E-4 0.0 0.0 20.185870274837107 0.0 33 6.400491557751636E-4 0.0 0.0 20.641585273749023 0.0 34 6.400491557751636E-4 0.0 0.0 21.11202140324377 0.0 35 6.400491557751636E-4 0.0 0.0 21.635261588089964 0.0 36 6.400491557751636E-4 0.0 0.0 22.138980273685018 0.0 37 6.400491557751636E-4 0.0 0.0 22.666380778043752 0.0 38 6.400491557751636E-4 0.0 0.0 23.13905707958371 0.0 39 9.600737336627453E-4 0.0 0.0 23.642455740600877 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACAATC 25 3.8842656E-5 45.0 12 CGCGCAT 45 3.8198777E-10 45.0 36 TACGGGT 20 7.0253934E-4 45.0 4 TACGCGG 25 3.8842656E-5 45.0 2 ATGAGTC 20 7.0253934E-4 45.0 18 TTGCGAG 25 3.8842656E-5 45.0 1 CGAATCT 20 7.0253934E-4 45.0 25 TTAACGG 40 6.7884685E-9 45.0 2 CGGTCTA 35 1.2081364E-7 45.0 31 CGCACTG 20 7.0253934E-4 45.0 31 GCTACGA 40 6.7884685E-9 45.0 10 TATACGG 20 7.0253934E-4 45.0 2 CTCACGA 30 2.16041E-6 44.999996 24 CGACGGT 30 2.16041E-6 44.999996 28 ACGGGTA 30 2.16041E-6 44.999996 5 ACTACGG 30 2.16041E-6 44.999996 2 AACGAGC 80 0.0 42.1875 15 CATTGGG 105 0.0 40.714287 3 CGGGTAT 50 1.0768417E-9 40.5 6 CGCATGT 50 1.0768417E-9 40.5 38 >>END_MODULE