##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935863.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 181535 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09850992921475 33.0 31.0 34.0 30.0 34.0 2 32.19957033079021 33.0 31.0 34.0 30.0 34.0 3 32.15748478254882 33.0 31.0 34.0 30.0 34.0 4 35.79400115680172 37.0 35.0 37.0 35.0 37.0 5 31.906673644200843 37.0 35.0 37.0 0.0 37.0 6 33.77811441319856 37.0 35.0 37.0 17.0 37.0 7 35.46943013743906 37.0 35.0 37.0 32.0 37.0 8 35.74441843170739 37.0 35.0 37.0 35.0 37.0 9 37.70189219709698 39.0 37.0 39.0 35.0 39.0 10 37.31880353650811 39.0 37.0 39.0 34.0 39.0 11 37.2797752499518 39.0 37.0 39.0 34.0 39.0 12 37.106249483570664 39.0 37.0 39.0 34.0 39.0 13 36.97877544275209 39.0 37.0 39.0 33.0 39.0 14 38.13922384113256 40.0 37.0 41.0 33.0 41.0 15 38.310794061751174 40.0 37.0 41.0 34.0 41.0 16 38.307742308645715 40.0 37.0 41.0 34.0 41.0 17 38.2923513372077 40.0 37.0 41.0 34.0 41.0 18 38.270680585011156 40.0 37.0 41.0 34.0 41.0 19 38.129556283912194 40.0 37.0 41.0 34.0 41.0 20 38.16853499325199 40.0 37.0 41.0 34.0 41.0 21 38.119299308673256 40.0 37.0 41.0 34.0 41.0 22 38.18602473352246 40.0 37.0 41.0 34.0 41.0 23 38.176786845511884 40.0 37.0 41.0 34.0 41.0 24 38.18795824496654 40.0 36.0 41.0 34.0 41.0 25 37.93183683587187 40.0 36.0 41.0 34.0 41.0 26 37.94881427823836 40.0 36.0 41.0 34.0 41.0 27 37.905417688049134 40.0 36.0 41.0 34.0 41.0 28 37.84677334949183 40.0 36.0 41.0 34.0 41.0 29 37.81000908915636 40.0 36.0 41.0 33.0 41.0 30 37.66381138623406 40.0 36.0 41.0 33.0 41.0 31 37.674117938689506 40.0 36.0 41.0 33.0 41.0 32 37.58475776021153 40.0 35.0 41.0 33.0 41.0 33 37.48765802737764 40.0 35.0 41.0 33.0 41.0 34 37.40768446855978 40.0 35.0 41.0 33.0 41.0 35 37.37576775828353 40.0 35.0 41.0 33.0 41.0 36 37.28838515988652 40.0 35.0 41.0 33.0 41.0 37 37.21580411490897 40.0 35.0 41.0 33.0 41.0 38 37.0744594706255 39.0 35.0 41.0 32.0 41.0 39 36.99713003002176 39.0 35.0 41.0 32.0 41.0 40 36.915520423058915 39.0 35.0 41.0 32.0 41.0 41 36.850480623571215 39.0 35.0 41.0 31.0 41.0 42 36.857261685074505 39.0 35.0 41.0 32.0 41.0 43 36.783369598149115 39.0 35.0 41.0 32.0 41.0 44 36.73869501748974 39.0 35.0 41.0 32.0 41.0 45 36.713575894455616 39.0 35.0 41.0 32.0 41.0 46 36.58217974495276 39.0 35.0 41.0 31.0 41.0 47 36.464224529705014 39.0 35.0 41.0 31.0 41.0 48 36.42643567356157 38.0 35.0 41.0 31.0 41.0 49 36.392332057179054 38.0 35.0 41.0 31.0 41.0 50 36.29923155314402 38.0 35.0 40.0 31.0 41.0 51 35.29625692015314 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 10.0 10 6.0 11 7.0 12 4.0 13 4.0 14 3.0 15 8.0 16 10.0 17 19.0 18 40.0 19 84.0 20 159.0 21 261.0 22 454.0 23 638.0 24 761.0 25 1044.0 26 1335.0 27 1414.0 28 1549.0 29 1900.0 30 2416.0 31 3217.0 32 4304.0 33 6656.0 34 11782.0 35 16310.0 36 14133.0 37 21316.0 38 34833.0 39 56806.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.68281598589804 19.202908530035533 22.508056297683645 10.606219186382791 2 32.10895970474013 25.302558735230118 24.331947007464123 18.256534552565622 3 31.440218139752663 26.019224942848485 25.331203349216402 17.209353568182443 4 28.55647671247969 25.249125512986474 27.213485002892 18.98091277164183 5 23.861514308535543 37.421433883273195 20.93480596028314 17.78224584790812 6 24.98251025972953 35.90657448976781 23.99977965681549 15.111135593687166 7 79.13460214283748 5.958630567108271 10.458038394799901 4.448728895254359 8 79.6606714958548 7.280689674167516 8.136172088027102 4.922466741950588 9 74.42421571597764 6.911063982152202 9.923706172363456 8.741014129506706 10 41.848128460076566 24.697716693750515 18.231745944308262 15.222408901864654 11 33.68110832621809 25.090478420139366 22.85013909163522 18.378274162007326 12 28.211088770760462 22.929462638058776 28.062357121216298 20.79709146996447 13 25.49425730575371 26.699534525022724 29.705015561737408 18.101192607486162 14 21.54736001322059 30.004131434709556 28.341642107582558 20.106866444487288 15 19.89313355551271 24.411821411848955 34.62417715592034 21.070867876717987 16 22.768061255405296 24.07249290770375 30.661304982510263 22.498140854380697 17 22.71738232296802 24.37215963863718 28.24909797008841 24.661360068306386 18 24.685597818602474 23.32608037017655 29.46539234858292 22.522929462638057 19 23.901176081747323 25.9514694136117 26.80309582174236 23.344258682898612 20 26.273170462996116 26.083675324317625 27.287850827664084 20.35530338502217 21 24.261437188420963 27.7902332883466 28.422067369928666 19.52626215330377 22 23.394937615335888 23.35417412620156 28.655080287547857 24.5958079709147 23 22.346104057068885 26.947971465557607 27.945575233426062 22.76034924394745 24 22.623736469551325 25.115817886358005 28.69804720852728 23.562398435563388 25 21.535241138072546 28.248547112127138 27.52306717712838 22.693144572671937 26 21.037816399041507 27.45365907400777 28.05739939956482 23.451125127385904 27 22.747128652876857 27.501032858677387 26.927038863029168 22.824799625416585 28 20.062797807585316 26.690169939681052 29.66865893629328 23.578373316440356 29 21.70490539014515 26.528217699066296 28.95309444459746 22.813782466191093 30 22.74988294268323 28.368083289723746 27.941168369735863 20.940865397857163 31 25.459553254193406 27.25535020794888 24.30164981959402 22.983446718263696 32 26.014818079158292 27.95383810284518 24.921915883989314 21.109427934007215 33 24.382625939901395 28.050789104029526 24.341862450767067 23.224722505302008 34 22.741069215302833 27.333021180488608 26.616905830831524 23.309003773377036 35 22.929462638058776 28.576307599085577 25.49040130002479 23.003828462830857 36 24.948907924091774 30.147354504640976 24.169443908888095 20.734293662379155 37 23.933676701462527 27.784173850772582 26.503429090808933 21.778720356955958 38 23.578373316440356 29.638912606384444 24.290632660368523 22.492081416806677 39 23.814691381827195 26.862588481560028 25.381331423692398 23.94138871292037 40 24.49445010604016 26.214779519101 26.490759357699616 22.800011017159225 41 21.52257140496323 27.30547828242488 25.092130994023194 26.079819318588704 42 24.276861211336655 26.10681135869116 26.829537003883548 22.786790426088633 43 24.13418899936651 26.814663838929132 26.00214834604897 23.048998815655384 44 22.78789214201118 26.169609166276476 26.913818271958572 24.128680419753767 45 23.128873220040212 25.41438290136888 25.5576059713003 25.899137907290605 46 24.645936045390695 27.41895502244746 25.483240146528217 22.451868785633625 47 21.938469165725618 27.026744154019887 28.391219324097282 22.643567356157217 48 23.09912689013138 27.236070179304267 26.5194039716859 23.145398958878452 49 22.831409920951884 25.20009915443303 29.09080893491613 22.877681989698956 50 21.98914809816289 26.01096207342937 28.25130140193351 23.748588426474235 51 22.082793951579585 25.676040432974357 25.624810642575813 26.616354972870244 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 67.0 1 146.5 2 226.0 3 423.5 4 621.0 5 436.0 6 251.0 7 267.5 8 284.0 9 267.5 10 251.0 11 272.5 12 294.0 13 278.5 14 263.0 15 277.0 16 291.0 17 283.5 18 276.0 19 304.0 20 332.0 21 371.0 22 410.0 23 494.0 24 578.0 25 648.0 26 974.5 27 1231.0 28 1476.0 29 1721.0 30 1933.5 31 2146.0 32 2611.0 33 3076.0 34 3715.0 35 4354.0 36 4710.5 37 5067.0 38 5912.5 39 6758.0 40 7480.0 41 8202.0 42 9481.0 43 10760.0 44 12222.5 45 13685.0 46 15995.5 47 18306.0 48 17741.5 49 17177.0 50 17539.0 51 17901.0 52 16470.0 53 15039.0 54 13208.5 55 11378.0 56 10142.5 57 8907.0 58 8415.0 59 7923.0 60 7023.5 61 6124.0 62 5579.0 63 5034.0 64 4534.0 65 4034.0 66 3475.5 67 2917.0 68 2389.5 69 1862.0 70 1522.0 71 1182.0 72 993.0 73 804.0 74 690.5 75 436.5 76 296.0 77 208.0 78 120.0 79 90.5 80 61.0 81 43.5 82 26.0 83 15.5 84 5.0 85 2.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 181535.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.49486324951111 #Duplication Level Percentage of deduplicated Percentage of total 1 72.97934362665104 28.823091965736637 2 9.443909787020377 7.459718511581788 3 3.742137048969971 4.433855730299943 4 2.106085331324881 3.3271820860990995 5 1.56352427577165 3.0875588729446113 6 1.2329665118484734 2.921750626600931 7 1.0711745261308006 2.9614123998127084 8 0.9024087479252967 2.8512408075577715 9 0.8549869590080478 3.039083372352439 >10 6.054646637934642 37.222574159253035 >50 0.022316135961058345 0.5800534332222437 >100 0.020921377463492197 1.3832043407607348 >500 0.005579033990264586 1.9092736937780592 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTC 950 0.523315063210951 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCG 935 0.5150521937918308 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGC 911 0.5018316027212384 No Hit GCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGC 670 0.3690748340540392 No Hit CCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGC 381 0.20987688324565512 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 278 0.1531385132343625 No Hit CTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGCT 263 0.14487564381524223 Illumina Single End Adapter 2 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTT 201 0.11072245021621174 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCT 192 0.10576472856473958 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15203679731181316 0.0 2 0.0 0.0 0.0 0.9166276475610764 0.0 3 0.0 0.0 0.0 1.1893023383920456 0.0 4 0.0 0.0 0.0 1.590877792161291 0.0 5 0.0 0.0 0.0 3.060566832842152 0.0 6 0.0 0.0 0.0 3.740876415016388 0.0 7 0.0 0.0 0.0 4.438813451951415 0.0 8 0.0 0.0 0.0 5.381331423692401 0.0 9 5.508579612746854E-4 0.0 0.0 5.717354780069959 0.0 10 5.508579612746854E-4 0.0 0.0 7.0642024953865645 0.0 11 5.508579612746854E-4 0.0 0.0 8.224309361831052 0.0 12 5.508579612746854E-4 0.0 0.0 9.724846448343294 0.0 13 5.508579612746854E-4 0.0 0.0 10.167185391246868 0.0 14 5.508579612746854E-4 0.0 0.0 10.375409700608698 0.0 15 5.508579612746854E-4 0.0 0.0 10.75770512573333 0.0 16 5.508579612746854E-4 0.0 0.0 11.478778197041892 0.0 17 5.508579612746854E-4 0.0 0.0 12.229046740298013 0.0 18 5.508579612746854E-4 0.0 0.0 13.07516456881593 0.0 19 5.508579612746854E-4 0.0 0.0 13.62987853581954 0.0 20 5.508579612746854E-4 0.0 0.0 14.097556944941747 0.0 21 5.508579612746854E-4 0.0 0.0 14.705153276227724 0.0 22 5.508579612746854E-4 0.0 0.0 15.292918720907814 0.0 23 5.508579612746854E-4 0.0 0.0 15.885091029278101 0.0 24 5.508579612746854E-4 0.0 0.0 16.384168342192964 0.0 25 5.508579612746854E-4 0.0 0.0 16.790150659652408 0.0 26 5.508579612746854E-4 0.0 0.0 17.209353568182443 0.0 27 5.508579612746854E-4 0.0 0.0 17.61423416971934 0.0 28 5.508579612746854E-4 0.0 0.0 18.02737764067535 0.0 29 5.508579612746854E-4 0.0 0.0 18.43280910017352 0.0 30 5.508579612746854E-4 0.0 0.0 18.931886413088385 0.0 31 5.508579612746854E-4 0.0 0.0 19.377530503759605 0.0 32 5.508579612746854E-4 0.0 0.0 19.79673341228964 0.0 33 5.508579612746854E-4 0.0 0.0 20.24127578703831 0.0 34 5.508579612746854E-4 0.0 0.0 20.661029553529623 0.0 35 5.508579612746854E-4 0.0 0.0 21.179937753050375 0.0 36 5.508579612746854E-4 0.0 0.0 21.58702178643237 0.0 37 5.508579612746854E-4 0.0 0.0 22.007326410884954 0.0 38 5.508579612746854E-4 0.0 0.0 22.451868785633625 0.0 39 5.508579612746854E-4 0.0 0.0 22.990057013798992 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTATGG 55 1.8189894E-12 45.000004 2 CGTTAGG 25 3.8777907E-5 45.000004 2 TGCGAAG 25 3.8777907E-5 45.000004 1 CGGGAAC 25 3.8777907E-5 45.000004 6 CGGTAGG 25 3.8777907E-5 45.000004 31 GCGAGAC 45 3.8016879E-10 45.0 21 GTTTGCG 20 7.017579E-4 45.0 1 AGGTACA 20 7.017579E-4 45.0 36 ACCGGCG 20 7.017579E-4 45.0 20 CTCCGAC 20 7.017579E-4 45.0 21 TACGGGT 20 7.017579E-4 45.0 4 AAGCCCG 20 7.017579E-4 45.0 14 GTGTACG 20 7.017579E-4 45.0 1 AAACACG 45 3.8016879E-10 45.0 40 CGTAAGG 35 1.2043893E-7 45.0 2 AAGGGCG 70 0.0 45.0 5 CGAGACA 45 3.8016879E-10 45.0 22 CGATGAG 20 7.017579E-4 45.0 10 CCACGAG 20 7.017579E-4 45.0 35 CGTCATA 20 7.017579E-4 45.0 38 >>END_MODULE