##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935856.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 634641 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.961105569920633 33.0 31.0 34.0 30.0 34.0 2 32.0976347257741 33.0 31.0 34.0 30.0 34.0 3 31.95350757357309 33.0 31.0 34.0 30.0 34.0 4 35.67450731988636 37.0 35.0 37.0 33.0 37.0 5 32.06113535053676 37.0 35.0 37.0 0.0 37.0 6 33.79080298940661 37.0 35.0 37.0 17.0 37.0 7 35.40928808570515 37.0 35.0 37.0 32.0 37.0 8 35.59511913034298 37.0 35.0 37.0 33.0 37.0 9 37.56270237819491 39.0 37.0 39.0 35.0 39.0 10 37.280353774811275 39.0 37.0 39.0 34.0 39.0 11 37.23570175894719 39.0 37.0 39.0 34.0 39.0 12 37.216333328606254 39.0 37.0 39.0 34.0 39.0 13 37.17542358593283 39.0 37.0 39.0 33.0 39.0 14 38.388020944124314 40.0 38.0 41.0 34.0 41.0 15 38.418773763434764 40.0 38.0 41.0 34.0 41.0 16 38.436560197024775 40.0 38.0 41.0 34.0 41.0 17 38.387252005464504 40.0 38.0 41.0 34.0 41.0 18 38.19021462527634 40.0 37.0 41.0 34.0 41.0 19 37.97350470581006 40.0 37.0 41.0 34.0 41.0 20 37.81949480099773 40.0 35.0 41.0 33.0 41.0 21 37.83979131508995 40.0 36.0 41.0 33.0 41.0 22 37.90406387233097 40.0 35.0 41.0 34.0 41.0 23 37.90710496170276 40.0 35.0 41.0 34.0 41.0 24 37.88210027401318 40.0 35.0 41.0 34.0 41.0 25 37.69600608848152 40.0 35.0 41.0 33.0 41.0 26 37.64813020274455 40.0 35.0 41.0 33.0 41.0 27 37.63874852081728 40.0 35.0 41.0 33.0 41.0 28 37.53824445631467 40.0 35.0 41.0 33.0 41.0 29 37.442108215510814 40.0 35.0 41.0 33.0 41.0 30 37.2224801108028 39.0 35.0 41.0 33.0 41.0 31 37.041650318841675 39.0 35.0 41.0 32.0 41.0 32 36.79073050748376 39.0 35.0 41.0 31.0 41.0 33 36.5032356875777 39.0 35.0 41.0 30.0 41.0 34 36.1496531109714 39.0 35.0 41.0 29.0 41.0 35 36.067483821562114 40.0 35.0 41.0 27.0 41.0 36 35.91612580970974 39.0 35.0 41.0 26.0 41.0 37 35.78161669353225 39.0 35.0 41.0 25.0 41.0 38 35.675575640401426 39.0 35.0 41.0 24.0 41.0 39 35.54154395949836 39.0 35.0 41.0 24.0 41.0 40 35.48894729461223 39.0 35.0 41.0 24.0 41.0 41 35.34377703299976 39.0 35.0 41.0 23.0 41.0 42 35.34035777707397 39.0 35.0 41.0 23.0 41.0 43 35.29842540901076 39.0 35.0 41.0 23.0 41.0 44 35.2993629469259 39.0 35.0 41.0 23.0 41.0 45 35.29019240799129 39.0 35.0 41.0 23.0 41.0 46 35.182403910242165 39.0 35.0 41.0 23.0 41.0 47 35.00882231056613 38.0 35.0 41.0 23.0 41.0 48 35.01318225579501 38.0 35.0 41.0 23.0 41.0 49 35.009337562495965 39.0 35.0 41.0 23.0 41.0 50 34.91490149549115 38.0 35.0 41.0 22.0 41.0 51 33.91776610713774 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 14.0 10 23.0 11 14.0 12 14.0 13 16.0 14 16.0 15 32.0 16 53.0 17 91.0 18 237.0 19 489.0 20 980.0 21 1810.0 22 2770.0 23 4162.0 24 5903.0 25 8722.0 26 11367.0 27 11855.0 28 10876.0 29 10053.0 30 10794.0 31 12600.0 32 16408.0 33 22516.0 34 35086.0 35 43635.0 36 46736.0 37 69275.0 38 113836.0 39 194113.0 40 133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.16039934388103 17.287726446920384 19.803164308640632 18.74870990055795 2 37.30739110772862 27.256827088070263 20.40807322565041 15.027708578550708 3 27.024097087959966 27.575432409819093 31.111762397954116 14.288708104266822 4 24.054544222639258 21.35128363909675 37.59826421551712 16.995907922746873 5 23.290175075357563 32.45850803840281 27.149679897768976 17.10163698847065 6 22.40589561657693 32.38807451771947 31.24884777378077 13.957182091922835 7 69.91968687809327 4.5975598803102855 20.763707355812183 4.719045885784247 8 69.68664173918798 7.693956110620021 17.389201138911606 5.230201011280393 9 64.08883132353567 5.903652616203491 18.22274325169663 11.784772808564211 10 34.2037466851338 26.04637897646071 25.329753356622092 14.420120981783402 11 26.603701935424912 21.436686252542774 33.06262910842508 18.896982703607236 12 22.46923851437269 19.71902225037462 36.65205998351824 21.159679251734445 13 23.106606727267856 20.838395250228082 39.36367174512835 16.691326277375712 14 18.64109000206416 26.848879917937857 35.23440811419369 19.27562196580429 15 16.493576683510835 24.07802206286704 40.43151955199869 18.99688170162344 16 20.064256800301273 25.892906383293862 33.35901714512614 20.683819671278723 17 20.17360996216759 25.796631481420206 33.626885120879365 20.402873435532847 18 20.4822884118738 24.34778087139028 33.974640781166045 21.19528993556987 19 19.548847301072573 26.133672422676756 31.513249222788946 22.80423105346172 20 21.538633652726503 27.019370006034908 33.52446501250313 17.917531328735457 21 20.436908425393256 27.86016031110502 34.69552077473722 17.007410488764513 22 19.6175475583834 22.233829834504863 35.63684035541353 22.511782251698204 23 19.646225188728746 25.63921965331581 35.146799529182644 19.5677556287728 24 21.089245731051097 24.426250431346226 33.65304164086468 20.831462196738 25 19.77795320504033 29.417576236013748 30.959235221172282 19.84523533777364 26 19.35472180335024 24.888559043616784 32.853849656735065 22.902869496297907 27 23.226201899971795 24.039417560479073 31.227733474515514 21.50664706503362 28 18.437352771094208 25.704138245086593 33.46222510048988 22.396283883329314 29 21.650980633145352 25.532860310002032 32.01526532322998 20.80089373362263 30 23.092898189685194 25.46857199582126 32.25949788935792 19.17903192513563 31 22.548495921316146 22.93469851459329 32.93405248006353 21.582753084027033 32 26.506166478371235 24.616279124733513 30.48243022433155 18.3951241725637 33 23.685516693689816 22.903027065695408 29.7216851731924 23.68977106742237 34 20.94050021980931 24.659610709046532 33.872220672789815 20.527668398354347 35 25.06346107484389 24.75525533333018 30.102845545749485 20.078438046076442 36 21.911285277818482 29.55749786099543 29.55749786099543 18.97371900019066 37 22.893257763050293 25.375921190090146 32.074353847293196 19.656467199566368 38 20.96807486437214 25.70240498171407 29.476192051884453 23.853328102029337 39 23.36549324736347 24.77400609163291 30.390252126792944 21.47024853421068 40 23.350051446408283 23.615398311801474 31.926081044243908 21.108469197546327 41 20.02061007719325 27.204514048099632 30.889589547476447 21.88528632723067 42 22.588518548281627 25.11593168421202 32.233656508167606 20.061893259338746 43 23.032549110441966 25.486377337738976 29.690486432487027 21.79058711933203 44 22.11801632734097 23.518335562940308 30.350859777417472 24.012788332301255 45 21.31724864923634 22.203734079582 29.752096066910266 26.72692120427139 46 24.342423511875218 24.70199687697454 28.817551970326534 22.138027640823708 47 19.986102379140334 24.196356680390963 34.013402852951515 21.804138087517195 48 20.741332501366916 24.345417330427754 31.110029134581595 23.803221033623736 49 21.465521452285625 22.138027640823708 34.23069105210663 22.165759854784042 50 20.029276394055852 23.317119442330387 33.39257942679404 23.261024736819714 51 19.924807883512095 22.14622124949381 31.1936984846551 26.73527238233899 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 157.0 1 429.0 2 701.0 3 8573.0 4 16445.0 5 10922.5 6 5400.0 7 5086.5 8 4773.0 9 4788.5 10 4804.0 11 4772.0 12 4740.0 13 4585.0 14 4430.0 15 4187.5 16 3945.0 17 3774.5 18 3604.0 19 3476.5 20 3349.0 21 3319.0 22 3289.0 23 3455.0 24 3621.0 25 3718.5 26 4535.0 27 5254.0 28 6295.5 29 7337.0 30 8340.0 31 9343.0 32 10968.0 33 12593.0 34 13947.0 35 15301.0 36 17332.0 37 19363.0 38 20880.0 39 22397.0 40 24164.5 41 25932.0 42 27855.5 43 29779.0 44 34688.0 45 39597.0 46 62085.5 47 84574.0 48 71612.0 49 58650.0 50 57710.5 51 56771.0 52 49951.0 53 43131.0 54 38605.5 55 34080.0 56 31087.0 57 28094.0 58 24754.5 59 21415.0 60 18977.5 61 16540.0 62 14815.5 63 13091.0 64 11442.5 65 9794.0 66 8092.5 67 6391.0 68 5521.5 69 4652.0 70 3787.0 71 2922.0 72 2544.5 73 2167.0 74 1582.0 75 858.0 76 719.0 77 558.5 78 398.0 79 268.0 80 138.0 81 97.0 82 56.0 83 56.0 84 56.0 85 40.0 86 24.0 87 14.0 88 4.0 89 4.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 634641.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.2157784498596 #Duplication Level Percentage of deduplicated Percentage of total 1 74.15787109675007 29.823165143401482 2 9.33704530121265 7.509930904197412 3 4.06466077482588 4.903904915826969 4 2.4341387354227297 3.9156313639992764 5 1.7181249263779015 3.4547865694197517 6 1.359874204973351 3.2813039848132353 7 1.087362507074206 3.0610390775426115 8 0.9025748955610745 2.903820162743147 9 0.7271848475292917 2.6319874248299637 >10 4.145199415347297 26.056501504699987 >50 0.03457112451798039 0.9307051120428215 >100 0.02185530851161565 1.528056705314532 >500 0.0027815847196601736 0.7339849871898814 >1k 0.005563169439320347 4.685965987234681 >5k 7.947384913314782E-4 2.3678326921821187 >10k+ 3.973692456657391E-4 2.2113834645620676 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTC 13838 2.18044532263122 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9403 1.4816250447103165 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCG 5414 0.8530807180752583 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGC 4993 0.7867440017269606 No Hit GAACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCT 3797 0.5982910023146945 No Hit GCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 2972 0.46829624937563125 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTT 2564 0.40400793519485817 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTT 2491 0.3925053691772199 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTC 2098 0.33058059595897527 No Hit CGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTG 1766 0.2782675559883462 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCT 1526 0.2404509005878914 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCT 1416 0.22311826686268302 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTC 1360 0.21429438060257688 No Hit GAATATGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTC 1253 0.19743445506987417 No Hit CGTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCT 1055 0.166235714364499 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1030 0.16229647942695163 No Hit CCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 1002 0.15788453629689855 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTGCTGAT 859 0.1353521124541276 No Hit CTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGCT 785 0.1236919770389874 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.302775900075791E-4 0.0 0.0 0.127316073181531 0.0 2 6.302775900075791E-4 0.0 0.0 0.8387419029025859 0.0 3 6.302775900075791E-4 0.0 0.0 1.3037291949306773 0.0 4 6.302775900075791E-4 0.0 0.0 2.3077613958127507 0.0 5 6.302775900075791E-4 0.0 0.0 5.586150280237174 0.0 6 6.302775900075791E-4 0.0 0.0 7.422148899929251 0.0 7 6.302775900075791E-4 0.0 0.0 8.705394073184682 0.0 8 6.302775900075791E-4 0.0 0.0 10.163383708269714 0.0 9 6.302775900075791E-4 0.0 0.0 10.907583972671164 0.0 10 6.302775900075791E-4 0.0 0.0 12.81165257208406 0.0 11 6.302775900075791E-4 0.0 0.0 13.846410805479003 0.0 12 6.302775900075791E-4 0.0 0.0 15.52342190309167 0.0 13 6.302775900075791E-4 0.0 0.0 16.010626480167527 0.0 14 6.302775900075791E-4 0.0 0.0 16.32245631782378 0.0 15 6.302775900075791E-4 0.0 0.0 16.707398355920905 0.0 16 6.302775900075791E-4 0.0 0.0 17.16687071903643 0.0 17 6.302775900075791E-4 0.0 0.0 17.685274036817667 0.0 18 6.302775900075791E-4 0.0 0.0 18.227155194826683 0.0 19 6.302775900075791E-4 0.0 0.0 18.740358722490353 0.0 20 6.302775900075791E-4 0.0 0.0 19.1268764545625 0.0 21 7.878469875094739E-4 0.0 0.0 19.542229386377496 0.0 22 7.878469875094739E-4 0.0 0.0 20.052754234283633 0.0 23 7.878469875094739E-4 0.0 0.0 20.521838330646776 0.0 24 7.878469875094739E-4 0.0 0.0 20.89307183116124 0.0 25 7.878469875094739E-4 0.0 0.0 21.239409366870404 0.0 26 7.878469875094739E-4 0.0 0.0 21.580231973667 0.0 27 7.878469875094739E-4 0.0 0.0 21.979827965731808 0.0 28 7.878469875094739E-4 0.0 0.0 22.337825636856113 0.0 29 7.878469875094739E-4 0.0 0.0 22.712210525320614 0.0 30 7.878469875094739E-4 0.0 0.0 23.20004537998648 0.0 31 7.878469875094739E-4 0.0 0.0 23.573957560258478 0.0 32 7.878469875094739E-4 0.0 0.0 23.974814107503295 0.0 33 7.878469875094739E-4 0.0 0.0 24.34778087139028 0.0 34 7.878469875094739E-4 0.0 0.0 24.734613742257434 0.0 35 7.878469875094739E-4 0.0 0.0 25.13326431793723 0.0 36 7.878469875094739E-4 0.0 0.0 25.502922124476672 0.0 37 7.878469875094739E-4 0.0 0.0 25.8962153406414 0.0 38 7.878469875094739E-4 0.0 0.0 26.302901955593793 0.0 39 7.878469875094739E-4 0.0 0.0 26.84163172565277 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTG 75 0.0 45.000004 5 CGATCGA 60 0.0 45.000004 41 GGCAATC 20 7.030895E-4 45.0 8 TAATACG 215 0.0 43.953487 4 CGTTTTT 5210 0.0 43.920345 1 CGTTATT 685 0.0 42.70073 1 TACGGCT 625 0.0 42.12 7 TAACGGG 155 0.0 42.09677 3 CGTTTCT 230 0.0 42.065216 1 GATCGAA 65 0.0 41.53846 42 CGAATAT 60 3.6379788E-12 41.250004 14 TACGGGT 50 1.0804797E-9 40.5 4 TAGTGCG 50 1.0804797E-9 40.5 1 CGTTCTG 275 0.0 40.090908 1 ACGGGAG 340 0.0 39.705883 5 GTAACGG 85 0.0 39.705883 2 ACGGCTG 665 0.0 39.586468 8 CCGATGA 720 0.0 39.375 18 CGTAAGG 80 0.0 39.375 2 GAATCTG 1665 0.0 38.91892 1 >>END_MODULE