##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935854.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 594796 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.976998836575902 33.0 31.0 34.0 30.0 34.0 2 32.088690912514544 33.0 31.0 34.0 30.0 34.0 3 32.05578719426492 33.0 31.0 34.0 30.0 34.0 4 35.71952568611759 37.0 35.0 37.0 35.0 37.0 5 31.922997128427227 37.0 35.0 37.0 0.0 37.0 6 33.73540003631497 37.0 35.0 37.0 17.0 37.0 7 35.385012676615176 37.0 35.0 37.0 32.0 37.0 8 35.56045938439398 37.0 35.0 37.0 33.0 37.0 9 37.49465194789474 39.0 37.0 39.0 35.0 39.0 10 37.16860906932797 39.0 37.0 39.0 34.0 39.0 11 37.19341085010659 39.0 37.0 39.0 34.0 39.0 12 37.12431825365336 39.0 37.0 39.0 34.0 39.0 13 37.01787167364945 39.0 37.0 39.0 33.0 39.0 14 38.24270842440097 40.0 37.0 41.0 33.0 41.0 15 38.289131063423426 40.0 37.0 41.0 34.0 41.0 16 38.34663145011063 40.0 37.0 41.0 34.0 41.0 17 38.20888170061668 40.0 37.0 41.0 33.0 41.0 18 38.1526741941775 40.0 37.0 41.0 34.0 41.0 19 38.03634691558114 40.0 37.0 41.0 34.0 41.0 20 37.92804591826442 40.0 37.0 41.0 33.0 41.0 21 38.042483473325305 40.0 37.0 41.0 33.0 41.0 22 38.07746017121837 40.0 37.0 41.0 34.0 41.0 23 38.00875762446284 40.0 37.0 41.0 34.0 41.0 24 37.99528241615613 40.0 36.0 41.0 33.0 41.0 25 37.87201998668451 40.0 36.0 41.0 33.0 41.0 26 37.82853953288186 40.0 36.0 41.0 33.0 41.0 27 37.76554818795015 40.0 36.0 41.0 33.0 41.0 28 37.690339208737115 40.0 36.0 41.0 33.0 41.0 29 37.678582236598764 40.0 36.0 41.0 33.0 41.0 30 37.52238750764968 40.0 36.0 41.0 33.0 41.0 31 37.57869420776199 40.0 36.0 41.0 33.0 41.0 32 37.360839682849246 40.0 36.0 41.0 32.0 41.0 33 37.23426855594187 40.0 36.0 41.0 32.0 41.0 34 37.06245838909475 40.0 36.0 41.0 31.0 41.0 35 37.00727140061466 40.0 36.0 41.0 31.0 41.0 36 36.982725169637995 40.0 35.0 41.0 31.0 41.0 37 36.92590736992179 40.0 35.0 41.0 31.0 41.0 38 36.83214076759091 40.0 35.0 41.0 31.0 41.0 39 36.63019421784948 40.0 35.0 41.0 31.0 41.0 40 36.505877645444826 39.0 35.0 41.0 30.0 41.0 41 36.45994256854451 39.0 35.0 41.0 30.0 41.0 42 36.43868486001924 39.0 35.0 41.0 30.0 41.0 43 36.404044411865584 39.0 35.0 41.0 30.0 41.0 44 36.45201043719191 39.0 35.0 41.0 30.0 41.0 45 36.46284272254689 39.0 35.0 41.0 30.0 41.0 46 36.31814100969072 39.0 35.0 41.0 30.0 41.0 47 36.12009159442901 39.0 35.0 41.0 30.0 41.0 48 36.12125501852736 39.0 35.0 41.0 30.0 41.0 49 36.09565464461765 39.0 35.0 41.0 29.0 41.0 50 36.00108776790698 39.0 35.0 41.0 29.0 41.0 51 34.912065649399125 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 19.0 10 24.0 11 18.0 12 13.0 13 15.0 14 13.0 15 20.0 16 42.0 17 86.0 18 146.0 19 334.0 20 787.0 21 1632.0 22 2752.0 23 3610.0 24 4253.0 25 4887.0 26 5328.0 27 5662.0 28 6128.0 29 7060.0 30 8704.0 31 11348.0 32 15035.0 33 21391.0 34 34429.0 35 44442.0 36 44485.0 37 68028.0 38 113702.0 39 190245.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.781612519250295 18.19581839824074 20.819911364568693 10.202657717940268 2 31.77543224904001 30.571490057095208 21.344797207782165 16.308280486082623 3 29.953967410675258 31.3320869676326 23.67988352309027 15.034062098601876 4 26.976980342840235 22.87725539512707 31.909259645323772 18.236504616708924 5 26.990094082677086 34.8134486445773 20.376566083161286 17.81989118958433 6 23.25267822917437 38.909642970026695 23.875244621685418 13.962434179113512 7 74.0563151063558 5.342335859689708 16.10602626782964 4.495322766124856 8 72.84178104761969 11.775297749144245 10.127505901182927 5.255415302053141 9 67.30341158985603 7.255765001782123 11.289921250311032 14.150902158050826 10 38.59928446055454 25.369202213868284 19.856051486560098 16.175461839017075 11 33.065118124533456 24.241588712768745 23.712499747812696 18.980793414885103 12 26.86013355839649 21.605390755822164 28.50842978096692 23.026045904814424 13 26.49866508853456 22.95610595901788 32.53754228340473 18.007686669042833 14 21.436425261770424 30.023234856992985 27.090128380150507 21.450211501086088 15 19.094445826804485 24.611799675855252 34.88053046758889 21.413224029751376 16 21.61867262052872 24.88987821034439 28.16764067007848 25.32380849904841 17 21.185414831303508 27.25287325402323 29.09821182388584 22.46350009078743 18 22.281925231507945 24.407023584556722 29.56341333835466 23.74763784558067 19 21.947524865668232 26.78716736494529 26.285987128359977 24.979320641026504 20 25.328011620790996 25.886858687684516 30.068460446943153 18.716669244581336 21 23.313875681746346 30.399330190519102 27.245307634886583 19.041486492847966 22 20.50803973126921 23.99377265482619 30.045931714402922 25.45225589950168 23 22.53125441327783 28.029273902312724 28.596695337561112 20.842776346848332 24 22.249813381394627 25.919979287016055 27.680078547939125 24.150128783650192 25 20.263418045851015 31.893119657832266 25.653165118797034 22.19029717751969 26 20.072091944128744 25.216881081917165 30.37528833415154 24.335738639802553 27 23.90248085057734 26.018500460662143 26.889555410594557 23.18946327816596 28 18.87168037444771 26.973449720576465 30.143444138830795 24.01142576614503 29 22.13414347103881 24.28815930167654 30.27239591389317 23.30530131339148 30 20.824786985790087 27.90385274951412 28.101399471415412 23.169960793280385 31 23.574973604395456 24.607260304373263 24.467716662519585 27.350049428711692 32 26.802466728088287 27.779776595673138 25.045561839689572 20.372194836549003 33 23.39423936946449 27.104250869205575 23.95611268401267 25.54539707731727 34 23.93408832608155 25.44603527932266 27.323990073907694 23.2958863206881 35 21.918607388079277 27.2409363882743 25.823979986415512 25.01647623723092 36 20.215502457985597 31.641604852756238 25.581039549694353 22.561853139563816 37 23.098003349047406 26.213693434387586 26.59752251192005 24.090780704644953 38 20.615639647879274 29.267009193067878 23.38650562545814 26.73084553359471 39 26.271192139826095 26.594496264265395 25.143242388987147 21.991069206921367 40 21.99728982710038 27.50892743058124 28.022380782654892 22.47140195966348 41 21.101016146712485 28.467743562498736 25.65081137062119 24.780428920167587 42 20.797046382289054 27.342483809575047 28.53650663420736 23.32396317392854 43 22.355563924437956 27.19150767658155 25.78262126846852 24.670307130511972 44 22.479808203148643 24.20510561604315 27.988587683844546 25.326498496963666 45 21.86732930281979 23.103215220008206 26.824659210889113 28.204796266282894 46 25.337426613494372 26.758081762486636 25.72176006563595 22.182731558383043 47 19.504670508880356 25.905520548221578 32.00038332470292 22.589425618195147 48 21.196342947834214 26.63030686151218 26.882662290936725 25.29068789971688 49 21.22004855446237 24.126255052152334 31.619412369955413 23.034284023429883 50 21.459962743528873 24.324810523271843 29.051809359847745 25.16341737335154 51 20.488537246383633 23.34312940907471 27.22160202825843 28.94673131628323 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 204.0 1 491.0 2 778.0 3 2279.5 4 3781.0 5 2545.0 6 1309.0 7 1290.5 8 1272.0 9 1240.5 10 1209.0 11 1236.0 12 1263.0 13 1204.0 14 1145.0 15 1219.5 16 1294.0 17 1356.5 18 1419.0 19 1360.5 20 1302.0 21 1523.5 22 1745.0 23 2014.5 24 2284.0 25 2772.0 26 3872.5 27 4485.0 28 5187.0 29 5889.0 30 7219.5 31 8550.0 32 9387.0 33 10224.0 34 12020.5 35 13817.0 36 14657.5 37 15498.0 38 17227.0 39 18956.0 40 21991.0 41 25026.0 42 27296.5 43 29567.0 44 34972.0 45 40377.0 46 60336.0 47 80295.0 48 68388.0 49 56481.0 50 56468.5 51 56456.0 52 51300.5 53 46145.0 54 41411.5 55 36678.0 56 33574.5 57 30471.0 58 27642.0 59 24813.0 60 22673.0 61 20533.0 62 18699.0 63 16865.0 64 14186.5 65 11508.0 66 9488.0 67 7468.0 68 6067.0 69 4666.0 70 3970.0 71 3274.0 72 2576.0 73 1878.0 74 1465.0 75 986.5 76 921.0 77 631.5 78 342.0 79 256.0 80 170.0 81 119.5 82 69.0 83 47.5 84 26.0 85 23.0 86 20.0 87 14.0 88 8.0 89 4.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 594796.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.54592306789756 #Duplication Level Percentage of deduplicated Percentage of total 1 72.14538485287007 24.201835299782413 2 10.202399510616047 6.844978181821633 3 3.8469912454067807 3.871526170838739 4 2.1265190636159144 2.853441796419081 5 1.450249372558254 2.4324976940552947 6 1.095577201508076 2.2051289110039454 7 0.8933503189445542 2.097778275039704 8 0.7515027437355823 2.0167882581334227 9 0.6907734849269663 2.085537076443315 >10 6.681563732857527 39.87967152905351 >50 0.07134971900635582 1.6472355142578672 >100 0.03618450035318191 2.212441597300731 >500 0.0020385634001792623 0.5901667872561721 >1k 0.00458676765040334 2.533682441233045 >5k 0.0015289225501344467 4.527290467361151 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC 9466 1.5914700166107372 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 8917 1.499169463143666 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 8098 1.361475194856724 No Hit GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 3114 0.5235408442558457 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1945 0.3270028715727745 No Hit GAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT 1882 0.31641100478147133 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCT 1679 0.2822816562317164 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCGAGAAT 1455 0.2446216854181938 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTC 1376 0.23133982071163894 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTA 1285 0.21604045756864537 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 1043 0.1753542391004647 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 1041 0.17501798936105822 No Hit CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 941 0.15820550239073566 No Hit GAATATGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC 925 0.15551550447548404 No Hit CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT 834 0.14021614133249047 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTT 752 0.12642990201682594 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14610051177210337 0.0 2 0.0 0.0 0.0 0.969407998708801 0.0 3 0.0 0.0 0.0 1.2412659130189174 0.0 4 1.6812486970322599E-4 0.0 0.0 1.8712297997969052 0.0 5 1.6812486970322599E-4 0.0 0.0 4.3473728807860175 0.0 6 1.6812486970322599E-4 0.0 0.0 5.161433499889037 0.0 7 1.6812486970322599E-4 0.0 0.0 6.029630327036497 0.0 8 1.6812486970322599E-4 0.0 0.0 7.174056315106355 0.0 9 1.6812486970322599E-4 0.0 0.0 7.556708518550898 0.0 10 1.6812486970322599E-4 0.0 0.0 9.92390668397232 0.0 11 1.6812486970322599E-4 0.0 0.0 11.047653313068682 0.0 12 1.6812486970322599E-4 0.0 0.0 13.626016314837356 0.0 13 1.6812486970322599E-4 0.0 0.0 14.119294682546622 0.0 14 1.6812486970322599E-4 0.0 0.0 14.35113887786737 0.0 15 1.6812486970322599E-4 0.0 0.0 14.9103221945003 0.0 16 3.3624973940645197E-4 0.0 0.0 15.590051042710442 0.0 17 3.3624973940645197E-4 0.0 0.0 16.31080235912817 0.0 18 3.3624973940645197E-4 0.0 0.0 17.018608060578753 0.0 19 3.3624973940645197E-4 0.0 0.0 17.779541220855553 0.0 20 6.724994788129039E-4 0.0 0.0 18.29316269779891 0.0 21 6.724994788129039E-4 0.0 0.0 18.852009764692433 0.0 22 6.724994788129039E-4 0.0 0.0 19.517111749238396 0.0 23 6.724994788129039E-4 0.0 0.0 20.11345066207574 0.0 24 6.724994788129039E-4 0.0 0.0 20.590757167163197 0.0 25 6.724994788129039E-4 0.0 0.0 21.006193720199867 0.0 26 6.724994788129039E-4 0.0 0.0 21.419276525060692 0.0 27 6.724994788129039E-4 0.0 0.0 21.872709298650292 0.0 28 6.724994788129039E-4 0.0 0.0 22.28007585794121 0.0 29 8.406243485161299E-4 0.0 0.0 22.71585552021197 0.0 30 8.406243485161299E-4 0.0 0.0 23.213000759924412 0.0 31 8.406243485161299E-4 0.0 0.0 23.662398536641135 0.0 32 8.406243485161299E-4 0.0 0.0 24.114822561012517 0.0 33 8.406243485161299E-4 0.0 0.0 24.53732035857672 0.0 34 8.406243485161299E-4 0.0 0.0 24.97444501980511 0.0 35 8.406243485161299E-4 0.0 0.0 25.443849656016518 0.0 36 8.406243485161299E-4 0.0 0.0 25.86987807584449 0.0 37 8.406243485161299E-4 0.0 0.0 26.293720872366325 0.0 38 8.406243485161299E-4 0.0 0.0 26.734544280728183 0.0 39 8.406243485161299E-4 0.0 0.0 27.21016953711861 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACAAA 45 3.8380676E-10 45.000004 12 CCGTAGA 30 2.163728E-6 45.000004 41 ACCGTAG 30 2.163728E-6 45.000004 40 CAATCGA 90 0.0 45.000004 41 CGTCATA 25 3.8885268E-5 45.000004 38 GTACGAG 30 2.163728E-6 45.000004 1 TGCGAAG 40 6.8048394E-9 45.0 1 CGAATAC 40 6.8048394E-9 45.0 45 TATACGT 20 7.030539E-4 45.0 10 CGATGAA 1215 0.0 43.148148 19 CCGATGA 1195 0.0 42.552303 18 AGACCGG 85 0.0 42.35294 2 CGTTATT 145 0.0 41.89655 1 TAATACG 415 0.0 41.74699 4 TACGGCT 1085 0.0 41.474655 7 AATACGG 420 0.0 41.25 5 ACCCGTC 55 6.002665E-11 40.909092 39 CACAACG 160 0.0 40.78125 12 TTAACGG 50 1.0804797E-9 40.500004 2 TCAAGCG 100 0.0 40.500004 17 >>END_MODULE