##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935842.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 332407 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.075169897144164 33.0 31.0 34.0 30.0 34.0 2 32.170971128766844 33.0 31.0 34.0 30.0 34.0 3 32.14121543770137 33.0 31.0 34.0 30.0 34.0 4 35.753401703333566 37.0 35.0 37.0 33.0 37.0 5 31.90831119681595 37.0 35.0 37.0 0.0 37.0 6 33.78305811851134 37.0 35.0 37.0 17.0 37.0 7 35.500455766575314 37.0 35.0 37.0 32.0 37.0 8 35.769120385551446 37.0 35.0 37.0 35.0 37.0 9 37.719019154229606 39.0 37.0 39.0 35.0 39.0 10 37.3458802010788 39.0 37.0 39.0 34.0 39.0 11 37.32163582596034 39.0 37.0 39.0 34.0 39.0 12 37.18890095575605 39.0 37.0 39.0 34.0 39.0 13 37.094594879169215 39.0 37.0 39.0 33.0 39.0 14 38.19344959642847 40.0 38.0 41.0 33.0 41.0 15 38.36045570640811 40.0 38.0 41.0 34.0 41.0 16 38.33553745859744 40.0 37.0 41.0 34.0 41.0 17 38.36164701706041 40.0 37.0 41.0 34.0 41.0 18 38.29259612463035 40.0 37.0 41.0 34.0 41.0 19 38.173895254913404 40.0 37.0 41.0 34.0 41.0 20 38.290974618464716 40.0 37.0 41.0 34.0 41.0 21 38.19529672961159 40.0 37.0 41.0 34.0 41.0 22 38.2890643097167 40.0 37.0 41.0 34.0 41.0 23 38.31030634132254 40.0 37.0 41.0 34.0 41.0 24 38.27559588095317 40.0 37.0 41.0 34.0 41.0 25 38.02500849861766 40.0 36.0 41.0 34.0 41.0 26 38.09330730098945 40.0 37.0 41.0 34.0 41.0 27 38.06552208587665 40.0 37.0 41.0 34.0 41.0 28 38.034424666147224 40.0 36.0 41.0 34.0 41.0 29 38.015282469984086 40.0 36.0 41.0 34.0 41.0 30 37.878227594485075 40.0 36.0 41.0 34.0 41.0 31 37.855045170528896 40.0 36.0 41.0 34.0 41.0 32 37.80295541309299 40.0 36.0 41.0 33.0 41.0 33 37.76584127289738 40.0 36.0 41.0 33.0 41.0 34 37.65102118788112 40.0 36.0 41.0 33.0 41.0 35 37.66046443065279 40.0 36.0 41.0 33.0 41.0 36 37.59107961023685 40.0 36.0 41.0 33.0 41.0 37 37.53599051764854 40.0 36.0 41.0 33.0 41.0 38 37.401832693054 40.0 35.0 41.0 33.0 41.0 39 37.31380807263385 40.0 35.0 41.0 33.0 41.0 40 37.210464881906816 40.0 35.0 41.0 32.0 41.0 41 37.1306079595195 39.0 35.0 41.0 32.0 41.0 42 37.16044487631127 39.0 35.0 41.0 33.0 41.0 43 37.082949516706925 39.0 35.0 41.0 32.0 41.0 44 37.030673240936565 39.0 35.0 41.0 32.0 41.0 45 36.962554940178755 39.0 35.0 41.0 32.0 41.0 46 36.85735859954814 39.0 35.0 41.0 32.0 41.0 47 36.77058545698496 39.0 35.0 41.0 32.0 41.0 48 36.756566498298774 39.0 35.0 41.0 32.0 41.0 49 36.74187065856014 39.0 35.0 41.0 32.0 41.0 50 36.61445757760817 39.0 35.0 41.0 31.0 41.0 51 35.599268366791314 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 6.0 10 11.0 11 15.0 12 6.0 13 11.0 14 10.0 15 13.0 16 31.0 17 34.0 18 66.0 19 96.0 20 208.0 21 342.0 22 589.0 23 812.0 24 1129.0 25 1558.0 26 1987.0 27 2343.0 28 2816.0 29 3448.0 30 4298.0 31 5655.0 32 7740.0 33 12103.0 34 20914.0 35 26503.0 36 25156.0 37 40262.0 38 66175.0 39 107983.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.26529224715484 20.332002635323565 23.47423489878372 10.928470218737871 2 32.25804510735333 23.793722755537637 25.00127855309906 18.94695358400996 3 33.1755949784451 24.519339243758402 25.70854404389799 16.596521733898502 4 28.634776042622445 25.70974738799123 25.35265502832371 20.302821541062613 5 22.731470757234355 37.10661929502086 21.813018378072663 18.34889156967212 6 24.87643160342592 35.09974218352803 24.357489463218286 15.666336749827773 7 80.51876163859365 5.880441747616627 8.710406218882275 4.890390394907448 8 81.0040101441907 5.433098580956478 8.181837325928756 5.38105394892406 9 75.32693354833081 7.030838700749382 10.633049243848655 7.009178507071151 10 38.15172363999555 30.0183209138195 17.24392085605899 14.58603459012596 11 32.393120481818976 24.766927290941528 23.46190062182806 19.37805160541144 12 27.55898642327027 23.519360302280038 27.82372212378199 21.097931150667705 13 25.869491316368187 25.96485633575707 30.030354354751854 18.13529799312289 14 21.53685090867521 28.429605874725862 29.60136218551354 20.432181031085385 15 20.007099730150088 25.78405388574849 33.82991332914169 20.378933054959735 16 23.40323759728285 26.043675373863966 30.040883615567665 20.51220341328552 17 23.62886461476443 25.023841254847216 27.203398243719295 24.143895886669053 18 25.919730932260755 23.49439091234541 29.924460074547166 20.661418080846673 19 23.775371758115803 25.97899562885258 27.43022860529411 22.815404007737502 20 26.479887607661688 26.038260325444412 27.55567722701387 19.926174839880026 21 23.985656138408636 27.71060777901789 29.145595610200747 19.15814047237272 22 23.536808791631945 24.205266435424043 28.35860857322499 23.89931619971902 23 21.996528352291016 27.505136775098 28.591455655265985 21.906879217345 24 22.128896202546876 25.531652462192433 29.57970199183531 22.75974934342538 25 21.892138252202873 26.864356045450304 27.9509757616416 23.29252994070522 26 21.220070576131068 26.58367603570322 28.345070952176098 23.851182435989614 27 21.67192628314085 25.754571955464233 28.72683186575493 23.846669895639984 28 18.72854663108779 26.08308489291742 29.745763476701754 25.442604999293035 29 20.439701931668104 25.886037297650173 30.21988104943638 23.454379721245342 30 22.68303615748164 24.532275192760682 29.036392133739664 23.748296516018012 31 23.412262677982113 26.26870071929893 26.017803475859413 24.301233126859543 32 22.868651983863156 25.593323846970733 28.403733976721306 23.134290192444805 33 23.20167746166597 24.320185796327994 27.308690851877365 25.169445890128667 34 20.091032980653235 25.670337868937775 30.13023191449037 24.10839723591862 35 19.9493392136748 25.959140451314198 29.481328612213343 24.610191722797655 36 23.18242395617421 25.93717942161266 27.7692708035631 23.111125818650027 37 20.88885011446811 26.547876548929477 27.93503145240624 24.628241884196182 38 21.066042532196974 27.130295090055263 27.160980364432756 24.642682013315003 39 22.069631505955048 24.399004834434894 28.902820939390566 24.62854272021949 40 24.15653099964802 24.146603410878832 28.502107356343277 23.194758233129868 41 19.809450462836224 25.435986606780244 27.945861549245354 26.808701381138185 42 21.336193281128253 23.330435279642124 29.981919754999144 25.351451684230476 43 21.913497609857796 23.422791938797918 29.289094393319033 25.37461605802525 44 22.245018907544065 23.831327258451235 28.684113150445086 25.239540683559614 45 21.58528550842792 23.575616638638778 28.209093069640527 26.630004783292772 46 22.832551661066102 24.547016157902814 27.643521345820034 24.97691083521105 47 19.45145559509878 25.300911232314604 31.173832079348507 24.07380109323811 48 20.091032980653235 24.88846504435827 29.24126146561294 25.779240509375555 49 23.09849070567106 22.519381360801667 30.57968093331368 23.802447000213593 50 20.427066818689138 24.581612300583323 29.468392663211063 25.522928217516476 51 20.517618461705077 23.033209288613055 27.793638521451115 28.655533728230754 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 85.0 1 261.5 2 438.0 3 776.0 4 1114.0 5 806.5 6 499.0 7 462.5 8 426.0 9 456.5 10 487.0 11 509.5 12 532.0 13 543.0 14 554.0 15 541.0 16 528.0 17 566.0 18 604.0 19 634.5 20 665.0 21 749.0 22 833.0 23 875.0 24 917.0 25 1397.5 26 2163.0 27 2448.0 28 3093.5 29 3739.0 30 4284.5 31 4830.0 32 5779.5 33 6729.0 34 7408.5 35 8088.0 36 8898.0 37 9708.0 38 10580.0 39 11452.0 40 13209.0 41 14966.0 42 16449.0 43 17932.0 44 20150.5 45 22369.0 46 26163.5 47 29958.0 48 32002.5 49 34047.0 50 34576.0 51 35105.0 52 31126.5 53 27148.0 54 24758.0 55 22368.0 56 19872.5 57 17377.0 58 15903.0 59 14429.0 60 12932.5 61 11436.0 62 10123.5 63 8811.0 64 7952.0 65 7093.0 66 6012.0 67 4931.0 68 4032.0 69 3133.0 70 2517.5 71 1902.0 72 1570.0 73 1238.0 74 969.0 75 604.0 76 508.0 77 388.0 78 268.0 79 184.5 80 101.0 81 57.0 82 13.0 83 9.5 84 6.0 85 6.5 86 7.0 87 5.5 88 4.0 89 2.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 332407.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.59235414207686 #Duplication Level Percentage of deduplicated Percentage of total 1 72.15112003896391 26.401793362132654 2 10.427316191147275 7.63120093635746 3 4.127810431248751 4.531389033948397 4 2.1420613960165378 3.135322767884347 5 1.4190433961956006 2.596306924828245 6 1.0441075746565163 2.292381248055371 7 0.7755520039383312 1.9865491508596158 8 0.6805503350810719 1.9922351098236522 9 0.6161252516430311 2.0290926063598214 >10 6.518856766385903 43.27150844988953 >50 0.07598312334342736 1.905783800525344 >100 0.01899578083585684 1.4600129305959304 >500 0.0016518070292049422 0.3925805830768192 >1k 8.259035146024711E-4 0.3738430956628371 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 1237 0.37213416083295475 No Hit CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 797 0.23976631057709374 No Hit CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT 502 0.1510196837010051 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 493 0.14831215949122611 No Hit GAATCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTC 486 0.1462063073280647 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGC 451 0.13567704651225757 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCG 378 0.11371601681071698 No Hit TCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 343 0.10318675599490985 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0018050161398526505 0.0 0.0 0.1582397482604157 0.0 2 0.0018050161398526505 0.0 0.0 0.9747087155204313 0.0 3 0.0018050161398526505 0.0 0.0 1.3086367013931717 0.0 4 0.0018050161398526505 0.0 0.0 1.7367263625615585 0.0 5 0.0018050161398526505 0.0 0.0 3.014677789577235 0.0 6 0.0018050161398526505 0.0 0.0 3.7791021248048327 0.0 7 0.0018050161398526505 0.0 0.0 4.534200543309858 0.0 8 0.0018050161398526505 0.0 0.0 5.760709010339734 0.0 9 0.0018050161398526505 0.0 0.0 6.197823752207384 0.0 10 0.0018050161398526505 0.0 0.0 7.3106162024265435 0.0 11 0.0018050161398526505 0.0 0.0 8.712211235022126 0.0 12 0.0018050161398526505 0.0 0.0 9.958574879590381 0.0 13 0.0018050161398526505 0.0 0.0 10.490152132776988 0.0 14 0.0018050161398526505 0.0 0.0 10.677572975298354 0.0 15 0.0018050161398526505 0.0 0.0 11.060537232970425 0.0 16 0.0018050161398526505 0.0 0.0 11.838499189246917 0.0 17 0.0018050161398526505 0.0 0.0 12.724160441867951 0.0 18 0.0018050161398526505 0.0 0.0 13.705487549901175 0.0 19 0.0018050161398526505 0.0 0.0 14.271059273721672 0.0 20 0.0018050161398526505 0.0 0.0 14.83392347333239 0.0 21 0.0018050161398526505 0.0 0.0 15.51441455805684 0.0 22 0.0018050161398526505 0.0 0.0 16.22137921283246 0.0 23 0.0018050161398526505 0.0 0.0 16.9391739644472 0.0 24 0.0021058521631614254 0.0 0.0 17.48669552686917 0.0 25 0.0021058521631614254 0.0 0.0 17.986083325561737 0.0 26 0.0021058521631614254 0.0 0.0 18.477950223671584 0.0 27 0.0021058521631614254 0.0 0.0 18.985761431016794 0.0 28 0.0021058521631614254 0.0 0.0 19.496881834618403 0.0 29 0.0021058521631614254 0.0 0.0 19.9869437165884 0.0 30 0.0021058521631614254 0.0 0.0 20.61809769349021 0.0 31 0.0024066881864702005 0.0 0.0 21.11868883627601 0.0 32 0.0024066881864702005 0.0 0.0 21.640940172740045 0.0 33 0.0024066881864702005 0.0 0.0 22.144238839735625 0.0 34 0.0024066881864702005 0.0 0.0 22.643325802404885 0.0 35 0.0024066881864702005 0.0 0.0 23.227248523647216 0.0 36 0.0024066881864702005 0.0 0.0 23.698357736148758 0.0 37 0.0024066881864702005 0.0 0.0 24.214893188169924 0.0 38 0.0024066881864702005 0.0 0.0 24.73714452463396 0.0 39 0.0024066881864702005 0.0 0.0 25.46155766876149 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 30 2.1608303E-6 45.000004 2 TCACGAC 25 3.884803E-5 45.0 25 CTCACGT 20 7.026045E-4 45.0 45 CTCACGA 25 3.884803E-5 45.0 24 TCGCACG 20 7.026045E-4 45.0 13 TCACCCG 20 7.026045E-4 45.0 26 TACTCGC 20 7.026045E-4 45.0 45 TCTCCGT 20 7.026045E-4 45.0 41 CATCGGG 20 7.026045E-4 45.0 3 GCGGATG 20 7.026045E-4 45.0 1 CGGTCTA 25 3.884803E-5 45.0 31 GCGCTAG 20 7.026045E-4 45.0 1 GCTCACG 20 7.026045E-4 45.0 44 CGGACGG 45 3.8380676E-10 45.0 2 CGCACGG 65 0.0 41.538464 2 TAGACGG 50 1.0768417E-9 40.5 2 ACGGGCG 50 1.0768417E-9 40.5 5 CGTTAGG 45 1.9212166E-8 40.0 2 AAGGGCG 135 0.0 40.0 5 GCCAGTA 45 1.9212166E-8 40.0 25 >>END_MODULE