##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935837.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 863711 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.936690629157205 33.0 31.0 34.0 30.0 34.0 2 32.0546444354651 33.0 31.0 34.0 30.0 34.0 3 32.00588159696936 33.0 31.0 34.0 30.0 34.0 4 35.686366157198414 37.0 35.0 37.0 33.0 37.0 5 32.00912805324929 37.0 35.0 37.0 0.0 37.0 6 33.76757503377866 37.0 35.0 37.0 17.0 37.0 7 35.36667241704691 37.0 35.0 37.0 32.0 37.0 8 35.535461514325974 37.0 35.0 37.0 33.0 37.0 9 37.47112170621886 39.0 37.0 39.0 35.0 39.0 10 37.17574512771054 39.0 37.0 39.0 34.0 39.0 11 37.120629469811085 39.0 37.0 39.0 34.0 39.0 12 37.10111947167513 39.0 37.0 39.0 34.0 39.0 13 37.01410425477967 39.0 37.0 39.0 33.0 39.0 14 38.20712252130632 40.0 38.0 41.0 33.0 41.0 15 38.25324211454989 40.0 38.0 41.0 33.0 41.0 16 38.34072276490632 40.0 37.0 41.0 34.0 41.0 17 38.199029536500056 40.0 37.0 41.0 33.0 41.0 18 38.130388521160434 40.0 37.0 41.0 33.0 41.0 19 38.02384709700351 40.0 37.0 41.0 33.0 41.0 20 37.844173571947096 40.0 36.0 41.0 33.0 41.0 21 37.97453314824056 40.0 37.0 41.0 33.0 41.0 22 38.028563952525786 40.0 37.0 41.0 33.0 41.0 23 37.942440237533155 40.0 37.0 41.0 33.0 41.0 24 37.945158739439464 40.0 36.0 41.0 33.0 41.0 25 37.84208375255149 40.0 36.0 41.0 33.0 41.0 26 37.78922232089206 40.0 36.0 41.0 33.0 41.0 27 37.69963564201451 40.0 36.0 41.0 33.0 41.0 28 37.62197309053607 40.0 36.0 41.0 33.0 41.0 29 37.62809782438802 40.0 36.0 41.0 33.0 41.0 30 37.4707778411992 40.0 36.0 41.0 33.0 41.0 31 37.418677080643874 40.0 36.0 41.0 32.0 41.0 32 37.211414466181395 40.0 36.0 41.0 32.0 41.0 33 37.08546029864156 40.0 36.0 41.0 31.0 41.0 34 36.81038912321367 40.0 35.0 41.0 31.0 41.0 35 36.81037986085624 40.0 35.0 41.0 31.0 41.0 36 36.74496909267104 40.0 35.0 41.0 31.0 41.0 37 36.74245320483356 40.0 35.0 41.0 30.0 41.0 38 36.6014662311815 40.0 35.0 41.0 30.0 41.0 39 36.41026222891685 40.0 35.0 41.0 30.0 41.0 40 36.42141063388101 39.0 35.0 41.0 30.0 41.0 41 36.19686098706627 39.0 35.0 41.0 28.0 41.0 42 36.25681043775059 39.0 35.0 41.0 30.0 41.0 43 36.22846530841914 39.0 35.0 41.0 30.0 41.0 44 36.26852731990214 39.0 35.0 41.0 30.0 41.0 45 36.312713396031775 39.0 35.0 41.0 30.0 41.0 46 36.173186401469934 39.0 35.0 41.0 30.0 41.0 47 35.97406076801152 39.0 35.0 41.0 29.0 41.0 48 35.99643515018334 39.0 35.0 41.0 29.0 41.0 49 36.05374482899951 39.0 35.0 41.0 29.0 41.0 50 35.901953315402956 39.0 35.0 41.0 28.0 41.0 51 34.885556627158856 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 16.0 9 30.0 10 32.0 11 27.0 12 12.0 13 17.0 14 22.0 15 31.0 16 54.0 17 92.0 18 212.0 19 548.0 20 1304.0 21 2753.0 22 4192.0 23 5892.0 24 7135.0 25 8308.0 26 9172.0 27 9297.0 28 9613.0 29 10536.0 30 12623.0 31 16670.0 32 22324.0 33 30964.0 34 48500.0 35 60454.0 36 64231.0 37 98119.0 38 163178.0 39 277169.0 40 179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.059825566653664 18.235381973831526 20.970093005646564 12.73469945386825 2 30.440390362053975 32.31578618310986 21.492142626410917 15.751680828425249 3 27.57068047066669 32.13123371127611 25.64804662670731 14.650039191349883 4 25.33115822306304 21.938009357296593 35.68473714008505 17.046095279555313 5 27.503759938220075 33.14268314285681 21.942293197608922 17.411263721314192 6 23.02355764833376 37.75695805657217 25.362650238332034 13.856834056762041 7 72.5092073621848 4.698909704750779 18.375243571055595 4.41663936200882 8 72.05060488983005 11.4909964096787 11.480923595971337 4.977475104519915 9 66.56508948016176 6.125312749287667 12.050095460171285 15.259502310379283 10 39.53891984703217 25.34424130293582 20.07523349824189 15.041605351790125 11 28.713308039378916 22.395685593908148 28.61315879964479 20.277847567068154 12 23.180670386275036 19.636545094366056 32.23149873047814 24.951285788880774 13 24.77483787980007 21.111228177017544 36.07954512562651 18.03438881755587 14 19.631335018310523 28.884082754532475 30.07707439178151 21.40750783537549 15 16.832250602342683 23.961487117797503 37.33285786565182 21.873404414207993 16 20.64336334723073 25.245597196284404 28.705666594497465 25.405372861987402 17 20.62449129396291 26.553094727287252 30.67715937391095 22.145254604838886 18 19.963969429589294 24.704791301720135 30.750216218156307 24.581023050534263 19 19.723263915823697 25.996542825088486 28.48788541537621 25.79230784371161 20 22.249340346481635 26.695850811208842 32.26299074574713 18.79181809656239 21 21.184863918602403 29.619282375702056 30.517036369804252 18.67881733589129 22 19.79921524676657 21.791548330402183 33.391956337247066 25.017280085584183 23 20.804875704952234 26.599406514447544 31.76675994632464 20.828957834275585 24 21.43193730310254 25.51084795724496 29.12710385765609 23.93011088199641 25 19.748619619293954 31.80415671445657 27.228667922487958 21.218555743761513 26 19.332623991126663 24.14546069229175 31.364889413241237 25.15702590334035 27 23.157398713226993 25.321895865630985 28.099213741633488 23.421491679508538 28 17.306251743928236 26.590259936483385 32.00572876807173 24.097759551516653 29 19.746304029935942 22.595173617101093 32.92640709681827 24.732115256144706 30 19.089371329067244 27.16730480450058 29.44665518906208 24.296668677370093 31 20.67740251079354 26.79298978477755 26.488952902070253 26.04065480235866 32 22.700880271294448 26.537580278588557 26.112669631392908 24.648869818724087 33 20.532099278578137 23.879631033991693 25.103188450766517 30.485081236663653 34 20.03100574150381 26.733363358808678 28.393062031165517 24.842568868521994 35 19.629019428952507 26.609710887090703 26.230648909183746 27.530620774773045 36 18.808027222068493 28.296270396000512 27.565470394611157 25.330231987319834 37 17.571502504888787 25.9193179199987 28.585487506816516 27.923692068295992 38 18.214541669609392 27.59603617413695 24.89478540854522 29.294636747708434 39 19.96767437256212 26.275802901665024 26.81880860611941 26.93771411965345 40 19.602621710271144 25.327221721154412 28.84807534001535 26.22208122855909 41 18.036125509574383 28.12051716372722 26.165580848223534 27.677776478474858 42 18.846234446475734 26.09310290131769 30.772908993864846 24.28775365834174 43 21.39616144752122 23.76558825810948 26.768097199178893 28.070153095190403 44 20.610366198879024 23.057712591364474 29.23281051184945 27.099110697907054 45 19.419342812584304 22.723225708599287 28.121443399470426 29.735988079345987 46 24.502640350765475 24.908678944693303 26.93563008923124 23.653050615309983 47 17.571270945952985 24.709885598307768 33.476475348814596 24.242368106924655 48 19.596138060068704 26.32385138084382 27.679976288364973 26.4000342707225 49 19.55549946683555 22.735266773260964 33.1559977816654 24.553235978238092 50 20.297761635547076 22.512159738616273 30.736091123072416 26.453987502764235 51 19.201677412930945 22.65294757158355 28.353002335271864 29.792372680213635 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 272.0 1 569.5 2 867.0 3 5482.0 4 10097.0 5 6424.5 6 2752.0 7 2640.0 8 2528.0 9 2535.0 10 2542.0 11 2448.5 12 2355.0 13 2270.5 14 2186.0 15 2137.5 16 2089.0 17 1984.5 18 1880.0 19 1921.0 20 1962.0 21 2074.5 22 2187.0 23 2563.5 24 2940.0 25 3577.0 26 5265.0 27 6316.0 28 7487.0 29 8658.0 30 10117.5 31 11577.0 32 13487.0 33 15397.0 34 18039.5 35 20682.0 36 22467.0 37 24252.0 38 27311.0 39 30370.0 40 33160.5 41 35951.0 42 40327.5 43 44704.0 44 51785.5 45 58867.0 46 94336.5 47 129806.0 48 107374.5 49 84943.0 50 84316.0 51 83689.0 52 72934.5 53 62180.0 54 55955.0 55 49730.0 56 46180.0 57 42630.0 58 38151.0 59 33672.0 60 29240.5 61 24809.0 62 22225.5 63 19642.0 64 16648.0 65 13654.0 66 11353.5 67 9053.0 68 7475.5 69 5898.0 70 4770.0 71 3642.0 72 2974.5 73 2307.0 74 1735.5 75 864.0 76 564.0 77 467.5 78 371.0 79 277.0 80 183.0 81 133.5 82 84.0 83 54.5 84 25.0 85 18.5 86 12.0 87 7.5 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 863711.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.71876709157494 #Duplication Level Percentage of deduplicated Percentage of total 1 72.65872707329751 23.773039682815323 2 10.05574257877827 6.580229987357589 3 3.8527648227186964 3.7817314467943812 4 2.068104164689143 2.7066327394232084 5 1.3013813575904043 2.128979676815902 6 0.9715268510285419 1.9072296457208453 7 0.7856871875162748 1.7994701266625697 8 0.6929667440175956 1.8138413999774994 9 0.6491915471105567 1.9116672324956556 >10 6.871571153580179 39.96479739505391 >50 0.05137791059004712 1.1410964394275966 >100 0.030539313789805744 1.8644058709528293 >500 0.0035928604458593657 0.7289521315118697 >1k 0.005389290668789048 3.7696029674554308 >5k 3.5928604458593656E-4 0.7106137131090553 >10k+ 0.0010778581337578096 5.417709544426309 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 17952 2.0784730077537508 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGC 14112 1.6338798510149806 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCG 14023 1.6235754783718166 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6045 0.6998868834598609 No Hit GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 4768 0.5520365029506398 RNA PCR Primer, Index 14 (95% over 23bp) GAACTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCT 4101 0.4748115978608585 RNA PCR Primer, Index 14 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCT 3214 0.3721152098329186 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTC 2337 0.27057661648398595 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCACCAACT 2229 0.25807243395070806 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCACCAACTCGTA 2072 0.23989505749029477 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTT 1931 0.22357015251629306 No Hit GAATATGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 1816 0.2102555137077101 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCG 1637 0.18953098895348097 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGC 1633 0.18906787108187809 No Hit CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 1401 0.16220703452891072 RNA PCR Primer, Index 16 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1345 0.15572338432647032 RNA PCR Primer, Index 16 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 1304 0.15097642614254073 RNA PCR Primer, Index 16 (95% over 24bp) CGTTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTT 1235 0.14298764285739096 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 1044 0.12087376448835316 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4733840370216424E-4 0.0 0.0 0.15746007634498113 0.0 2 3.4733840370216424E-4 0.0 0.0 1.0013766178733396 0.0 3 3.4733840370216424E-4 0.0 0.0 1.3298429683076862 0.0 4 3.4733840370216424E-4 0.0 0.0 2.1430779508423536 0.0 5 3.4733840370216424E-4 0.0 0.0 5.241683850269361 0.0 6 3.4733840370216424E-4 0.0 0.0 6.361965981676741 0.0 7 3.4733840370216424E-4 0.0 0.0 7.463144500880503 0.0 8 3.4733840370216424E-4 0.0 0.0 8.676976442351666 0.0 9 3.4733840370216424E-4 0.0 0.0 9.088340891802929 0.0 10 3.4733840370216424E-4 0.0 0.0 11.659108197070548 0.0 11 4.631178716028857E-4 0.0 0.0 12.751719035649655 0.0 12 4.631178716028857E-4 0.0 0.0 15.50958596104484 0.0 13 5.788973395036071E-4 0.0 0.0 15.989607634961231 0.0 14 5.788973395036071E-4 0.0 0.0 16.265625886436553 0.0 15 5.788973395036071E-4 0.0 0.0 16.818472845662495 0.0 16 5.788973395036071E-4 0.0 0.0 17.431062010325213 0.0 17 5.788973395036071E-4 0.0 0.0 18.100267334791383 0.0 18 5.788973395036071E-4 0.0 0.0 18.760210301825495 0.0 19 5.788973395036071E-4 0.0 0.0 19.5636040295886 0.0 20 5.788973395036071E-4 0.0 0.0 20.037836730109955 0.0 21 5.788973395036071E-4 0.0 0.0 20.562549278636027 0.0 22 5.788973395036071E-4 0.0 0.0 21.228281219065174 0.0 23 5.788973395036071E-4 0.0 0.0 21.803126277192256 0.0 24 5.788973395036071E-4 0.0 0.0 22.268328179217352 0.0 25 5.788973395036071E-4 0.0 0.0 22.682355556430334 0.0 26 5.788973395036071E-4 0.0 0.0 23.080868484944617 0.0 27 5.788973395036071E-4 0.0 0.0 23.557416774823988 0.0 28 5.788973395036071E-4 0.0 0.0 23.966234075981433 0.0 29 5.788973395036071E-4 0.0 0.0 24.395197004553605 0.0 30 5.788973395036071E-4 0.0 0.0 24.93496088390677 0.0 31 6.946768074043285E-4 0.0 0.0 25.393331797325725 0.0 32 6.946768074043285E-4 0.0 0.0 25.82078959281519 0.0 33 6.946768074043285E-4 0.0 0.0 26.253457464360185 0.0 34 6.946768074043285E-4 0.0 0.0 26.702218681943382 0.0 35 8.1045627530505E-4 0.0 0.0 27.176335602996836 0.0 36 8.1045627530505E-4 0.0 0.0 27.60205670646779 0.0 37 9.262357432057714E-4 0.0 0.0 28.030556517168357 0.0 38 9.262357432057714E-4 0.0 0.0 28.466929331686178 0.0 39 9.262357432057714E-4 0.0 0.0 29.026723058986164 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCGC 20 7.0323114E-4 45.0 34 CGATGAA 1865 0.0 43.19035 19 TACGGCT 1805 0.0 42.75623 7 CCGATGA 1845 0.0 42.439026 18 TAATACG 555 0.0 42.162167 4 ACGGCTG 1845 0.0 41.82927 8 TACGAAT 70 0.0 41.785713 12 AATACGG 555 0.0 41.75676 5 CGTTTTT 2430 0.0 41.666664 1 CGTAAGG 130 0.0 41.53846 2 CCACCGA 2390 0.0 40.57531 15 CTCGAAT 295 0.0 40.42373 43 GATGAAT 2065 0.0 40.423725 20 ACCACCG 2535 0.0 40.029587 14 TTACGGG 180 0.0 40.0 3 ACCGATG 1945 0.0 39.91003 17 GATACCT 1710 0.0 39.605263 5 ATGAATG 2075 0.0 39.46988 21 CGTTATT 280 0.0 39.375 1 ATTGCGG 80 0.0 39.375 2 >>END_MODULE