##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935836.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 547482 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05429767554002 33.0 31.0 34.0 30.0 34.0 2 32.180773066511776 33.0 31.0 34.0 30.0 34.0 3 32.03570711000544 33.0 31.0 34.0 30.0 34.0 4 35.72584304141506 37.0 35.0 37.0 33.0 37.0 5 32.08559002853062 37.0 35.0 37.0 0.0 37.0 6 33.88707025984416 37.0 35.0 37.0 17.0 37.0 7 35.52762830558813 37.0 35.0 37.0 32.0 37.0 8 35.80294694620097 37.0 35.0 37.0 35.0 37.0 9 37.76210359427342 39.0 38.0 39.0 35.0 39.0 10 37.36318454305347 39.0 37.0 39.0 34.0 39.0 11 37.359262952937264 39.0 37.0 39.0 34.0 39.0 12 37.43583168031095 39.0 37.0 39.0 35.0 39.0 13 37.47630607033656 39.0 37.0 39.0 35.0 39.0 14 38.768416130575986 40.0 38.0 41.0 35.0 41.0 15 38.869438629945826 40.0 38.0 41.0 35.0 41.0 16 38.78966614427506 40.0 38.0 41.0 35.0 41.0 17 38.7603884693926 40.0 38.0 41.0 35.0 41.0 18 38.56824881913926 40.0 38.0 41.0 35.0 41.0 19 38.361631980594794 40.0 37.0 41.0 34.0 41.0 20 38.33223010071564 40.0 37.0 41.0 34.0 41.0 21 38.254552661092056 40.0 37.0 41.0 34.0 41.0 22 38.32099137505891 40.0 37.0 41.0 34.0 41.0 23 38.33657179596772 40.0 37.0 41.0 35.0 41.0 24 38.315487997778924 40.0 37.0 41.0 34.0 41.0 25 38.04687642698755 40.0 36.0 41.0 34.0 41.0 26 38.11927150116351 40.0 37.0 41.0 34.0 41.0 27 38.090625810528934 40.0 37.0 41.0 34.0 41.0 28 37.950657738519254 40.0 36.0 41.0 34.0 41.0 29 37.84437844531875 40.0 36.0 41.0 33.0 41.0 30 37.662029071275406 40.0 36.0 41.0 33.0 41.0 31 37.57557326085607 40.0 36.0 41.0 33.0 41.0 32 37.37087977321629 40.0 36.0 41.0 33.0 41.0 33 37.09744795262675 40.0 36.0 41.0 31.0 41.0 34 36.84087696033842 40.0 36.0 41.0 31.0 41.0 35 36.64613996441892 40.0 36.0 41.0 30.0 41.0 36 36.50139730621281 40.0 35.0 41.0 30.0 41.0 37 36.45271442714098 40.0 35.0 41.0 30.0 41.0 38 36.32019500184481 40.0 35.0 41.0 29.0 41.0 39 36.252749862095925 40.0 35.0 41.0 28.0 41.0 40 36.18532481433179 40.0 35.0 41.0 28.0 41.0 41 36.015781340756405 39.0 35.0 41.0 27.0 41.0 42 35.99364545318385 39.0 35.0 41.0 27.0 41.0 43 35.952730866037605 39.0 35.0 41.0 26.0 41.0 44 35.94467398014912 39.0 35.0 41.0 26.0 41.0 45 35.94791792241571 39.0 35.0 41.0 26.0 41.0 46 35.811876920154454 39.0 35.0 41.0 26.0 41.0 47 35.72246028179922 39.0 35.0 41.0 26.0 41.0 48 35.65996690302147 39.0 35.0 41.0 26.0 41.0 49 35.60542995020841 39.0 35.0 41.0 25.0 41.0 50 35.50720206326418 39.0 35.0 41.0 24.0 41.0 51 34.54447817462492 38.0 34.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 18.0 10 19.0 11 13.0 12 16.0 13 13.0 14 9.0 15 17.0 16 24.0 17 61.0 18 149.0 19 253.0 20 581.0 21 974.0 22 1503.0 23 2352.0 24 3800.0 25 6141.0 26 8487.0 27 9059.0 28 8412.0 29 8023.0 30 8253.0 31 9710.0 32 12042.0 33 15908.0 34 24768.0 35 33433.0 36 39126.0 37 60730.0 38 106436.0 39 187013.0 40 134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.00222838376422 20.249432858066566 22.584304141506024 17.164034616663194 2 37.08889059366335 24.459616937177845 23.42341848681783 15.028073982340972 3 29.208266207838797 23.687719413606292 31.707526457490843 15.396487921064072 4 25.28978121655141 23.855578813550036 33.01606262854304 17.838577341355517 5 21.669753526143325 35.150562027610036 26.902071666283096 16.277612779963544 6 23.085690488454418 32.85989311064108 29.755133502106005 14.299282898798499 7 76.49438703007587 4.401971206359296 15.036658739465409 4.0669830240994225 8 78.01096657059044 4.485444270313909 13.630037151906363 3.8735520071892773 9 71.61897560102433 6.584326060034851 15.392652178519112 6.4040461604217125 10 30.826036289777566 33.835998261130044 22.42338560902459 12.914579840067802 11 22.271234488074494 24.87351182321976 34.79931760313581 18.055936085569936 12 20.32578240015197 22.064104390646634 38.0701100675456 19.5400031416558 13 21.32691120438663 23.080758819468038 38.720177101712935 16.872152874432402 14 18.594583931526515 27.48199940819972 35.50710342988445 18.41631323038931 15 17.66176787547353 26.734577575153157 38.054036479738144 17.549618069635166 16 20.980415794491876 27.099703734552005 34.087148070621495 17.83273240033462 17 21.432668105983392 24.965204335485 33.26228076904811 20.33984678948349 18 21.476687818046987 24.5776116840371 34.323137564340016 19.6225629335759 19 20.364505134415378 26.848188616246745 32.80637536941854 19.980930879919338 20 21.421526187162318 26.243602529398224 33.231777483095335 19.10309380034412 21 21.300608969792613 26.877413321351206 34.51163691226378 17.3103407965924 22 20.385327736802306 24.072389594543747 34.276743344986684 21.265539323667262 23 18.478233074329385 26.362145239478192 34.31345688077416 20.846164805418262 24 18.898520864612898 25.761212240767733 34.53483402194045 20.80543287267892 25 19.51589275994462 28.389243847286306 32.001600052604466 20.093263340164608 26 18.78308327945028 27.6264790440599 32.458053415454756 21.132384261035067 27 20.09709908270957 26.672292422399273 32.42389704136392 20.80671145352724 28 19.378901954767464 26.563065087071358 33.53260929126437 20.52542366689681 29 19.489042562129896 26.279585447558095 33.048575112971754 21.18279687734026 30 20.82187176930018 27.2456446056674 32.05365655857179 19.878827066460634 31 21.98958139263026 27.297335802820914 30.446845741047195 20.26623706350163 32 21.252936169590964 27.564741854526726 30.614887795397838 20.567434180484472 33 21.55322001453929 26.181317376644348 30.87480501642063 21.39065759239573 34 22.970618212105602 25.997201734486246 30.698726168166257 20.33345388524189 35 20.93365626632474 26.75320832465725 31.420393729839518 20.892741679178496 36 21.714138547020724 27.074862735213213 31.827347748419125 19.383650969346938 37 20.988269933988697 27.14080097610515 31.89803500389054 19.972894086015614 38 21.52965759604882 26.56069057978162 30.863297788785747 21.046354035383814 39 22.94048023496663 25.200828520389713 30.35113483183009 21.50755641281357 40 22.99728575551342 24.941276608180726 31.897121731856025 20.164315904449825 41 20.614924326279223 26.458769420729816 31.95009150985786 20.976214743133106 42 21.29604260962004 26.790469823665436 31.935113848491824 19.9783737182227 43 21.325632623538308 26.49676153736561 31.028234718219043 21.149371120877035 44 21.472852075502026 25.92815836867696 29.77705203093435 22.821937524886664 45 21.212934854479233 24.945842968353297 29.70526884902152 24.13595332814595 46 22.650425036804865 26.272096616875075 29.058124285364634 22.01935406095543 47 20.855845488984112 25.50640934313822 31.949360892230246 21.68838427564742 48 20.841963754059496 25.207404079038216 31.375460745741414 22.575171421160878 49 21.312846815055106 24.185452672416627 32.699339886973455 21.80236062555481 50 20.42551170632094 24.252121530936176 32.869573794206936 22.452792968535952 51 20.8996825466408 23.801878417920587 30.8727958179447 24.42564321749391 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 99.0 1 281.0 2 463.0 3 6171.5 4 11880.0 5 7876.5 6 3873.0 7 3777.5 8 3682.0 9 3700.0 10 3718.0 11 3713.5 12 3709.0 13 3627.5 14 3546.0 15 3445.5 16 3345.0 17 3218.5 18 3092.0 19 2949.0 20 2806.0 21 2851.5 22 2897.0 23 3120.0 24 3343.0 25 3647.0 26 5030.0 27 6109.0 28 7162.5 29 8216.0 30 9192.5 31 10169.0 32 11807.0 33 13445.0 34 14945.5 35 16446.0 36 18002.0 37 19558.0 38 21738.5 39 23919.0 40 25553.5 41 27188.0 42 29684.0 43 32180.0 44 36014.5 45 39849.0 46 48440.5 47 57032.0 48 56416.0 49 55800.0 50 53514.5 51 51229.0 52 44333.0 53 37437.0 54 32891.0 55 28345.0 56 24810.5 57 21276.0 58 18878.5 59 16481.0 60 14171.0 61 11861.0 62 10121.0 63 8381.0 64 6702.0 65 5023.0 66 4006.5 67 2990.0 68 2321.5 69 1653.0 70 1328.5 71 1004.0 72 777.0 73 550.0 74 480.0 75 335.0 76 260.0 77 206.5 78 153.0 79 104.5 80 56.0 81 49.0 82 42.0 83 24.0 84 6.0 85 6.5 86 7.0 87 4.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 547482.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.4147466608611 #Duplication Level Percentage of deduplicated Percentage of total 1 73.92596146313001 32.09476888582369 2 9.538306261770693 8.282062998569593 3 4.032857864040415 5.252565074597281 4 2.4548157809229334 4.263008209114123 5 1.807872795401117 3.9244169703701126 6 1.3669728953108524 3.5608069165310683 7 1.0818646091533455 3.2878214549420806 8 0.9024625205587151 3.134414536078302 9 0.7884255541865846 3.0806366126363627 >10 4.045488498344225 26.766372306832476 >50 0.03664783812533662 1.1128145925027884 >100 0.011931854268871061 0.9984805243595943 >500 0.0029829635672177653 1.0602727228283926 >1k 0.0029829635672177653 1.9355388634148742 >5k 4.2613765245968073E-4 1.2460193313992713 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6735 1.2301774304908655 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTTC 3475 0.6347240639874918 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTT 1399 0.25553351525712265 No Hit GCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTTCTGC 1169 0.21352300166946128 TruSeq Adapter, Index 21 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGC 1165 0.21279238404184977 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCG 1147 0.20950460471759802 No Hit CGCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTTCTG 1102 0.20128515640696865 No Hit CGTTCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTTC 1005 0.18356767893738973 No Hit GAACTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTTCT 997 0.18210644368216672 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTT 961 0.1755308850336632 No Hit CCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTTCTGC 823 0.1503245768810664 TruSeq Adapter, Index 21 (95% over 23bp) CGTTTTCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCT 800 0.1461235255223003 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 767 0.14009593009450538 No Hit CTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTTCTGCT 760 0.13881734924618527 TruSeq Adapter, Index 14 (95% over 22bp) CGTCTGTCTCTTATACACATCTGACGCAAGCGGTTTCGTATGCCGTCTTCT 623 0.11379369550049134 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8265440690287536E-4 0.0 0.0 0.1466714887430089 0.0 2 1.8265440690287536E-4 0.0 0.0 0.6191984394007474 0.0 3 1.8265440690287536E-4 0.0 0.0 1.0067910908486488 0.0 4 1.8265440690287536E-4 0.0 0.0 1.5814218549650947 0.0 5 1.8265440690287536E-4 0.0 0.0 3.165218217219927 0.0 6 1.8265440690287536E-4 0.0 0.0 4.61567686243566 0.0 7 1.8265440690287536E-4 0.0 0.0 5.583197255800191 0.0 8 1.8265440690287536E-4 0.0 0.0 6.8407728473264875 0.0 9 1.8265440690287536E-4 0.0 0.0 7.474583639279465 0.0 10 1.8265440690287536E-4 0.0 0.0 8.653252527023719 0.0 11 1.8265440690287536E-4 0.0 0.0 9.744247299454594 0.0 12 3.653088138057507E-4 0.0 0.0 10.94008570144772 0.0 13 3.653088138057507E-4 0.0 0.0 11.528050237268074 0.0 14 3.653088138057507E-4 0.0 0.0 11.850069956637844 0.0 15 3.653088138057507E-4 0.0 0.0 12.175012146518059 0.0 16 3.653088138057507E-4 0.0 0.0 12.696307823818865 0.0 17 3.653088138057507E-4 0.0 0.0 13.333954358316802 0.0 18 3.653088138057507E-4 0.0 0.0 14.073339397459643 0.0 19 3.653088138057507E-4 0.0 0.0 14.560113391855806 0.0 20 3.653088138057507E-4 0.0 0.0 15.005059527071209 0.0 21 3.653088138057507E-4 0.0 0.0 15.499687660964197 0.0 22 3.653088138057507E-4 0.0 0.0 16.075779660335865 0.0 23 3.653088138057507E-4 0.0 0.0 16.653880858183467 0.0 24 3.653088138057507E-4 0.0 0.0 17.08731976576399 0.0 25 3.653088138057507E-4 0.0 0.0 17.50157996061971 0.0 26 3.653088138057507E-4 0.0 0.0 17.919858552427293 0.0 27 3.653088138057507E-4 0.0 0.0 18.318045159475563 0.0 28 3.653088138057507E-4 0.0 0.0 18.748926905359447 0.0 29 3.653088138057507E-4 0.0 0.0 19.183279084974483 0.0 30 3.653088138057507E-4 0.0 0.0 19.690693027350672 0.0 31 3.653088138057507E-4 0.0 0.0 20.173631279201874 0.0 32 3.653088138057507E-4 0.0 0.0 20.66880737631557 0.0 33 3.653088138057507E-4 0.0 0.0 21.176403973098658 0.0 34 3.653088138057507E-4 0.0 0.0 21.67833828326776 0.0 35 3.653088138057507E-4 0.0 0.0 22.15963264545684 0.0 36 3.653088138057507E-4 0.0 0.0 22.576997965229907 0.0 37 3.653088138057507E-4 0.0 0.0 23.025231879769564 0.0 38 3.653088138057507E-4 0.0 0.0 23.474561720750636 0.0 39 5.47963220708626E-4 0.0 0.0 23.98307158956824 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAG 35 1.2103737E-7 45.000004 1 CGCACGG 35 1.2103737E-7 45.000004 2 TAGCACG 25 3.8881197E-5 45.0 1 ACTAGCG 20 7.0300454E-4 45.0 1 TCTACGG 20 7.0300454E-4 45.0 2 TATAGCG 20 7.0300454E-4 45.0 1 CGCCGGT 110 0.0 45.0 28 AATCGCG 20 7.0300454E-4 45.0 1 CGTTTTT 3685 0.0 44.32836 1 CGTTATT 535 0.0 44.15888 1 CGCCCAA 50 1.0786607E-9 40.5 37 TATTGCG 40 3.453806E-7 39.375 1 AAGGGCG 230 0.0 39.130432 5 ATAGCGG 75 0.0 39.000004 2 CGAACGG 35 6.242295E-6 38.57143 2 GGCCGGT 140 0.0 38.57143 9 CTTGCGG 70 0.0 38.57143 2 ACGCCGG 130 0.0 38.076927 27 CACGCCG 130 0.0 38.076927 26 ATGGGCG 160 0.0 37.96875 5 >>END_MODULE