##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935832.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 507024 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95713417905267 33.0 31.0 34.0 30.0 34.0 2 32.08062537473571 33.0 31.0 34.0 30.0 34.0 3 31.96338043169554 33.0 31.0 34.0 30.0 34.0 4 35.671260137587176 37.0 35.0 37.0 33.0 37.0 5 32.020472403673196 37.0 35.0 37.0 0.0 37.0 6 33.82619165956641 37.0 35.0 37.0 17.0 37.0 7 35.46386561582884 37.0 35.0 37.0 32.0 37.0 8 35.70934511975764 37.0 35.0 37.0 33.0 37.0 9 37.665422149641834 39.0 37.0 39.0 35.0 39.0 10 37.188852993152196 39.0 37.0 39.0 34.0 39.0 11 37.24113454195462 39.0 37.0 39.0 34.0 39.0 12 37.26241164126353 39.0 37.0 39.0 34.0 39.0 13 37.25964648616239 39.0 37.0 39.0 34.0 39.0 14 38.51779205718073 40.0 38.0 41.0 34.0 41.0 15 38.59326580201332 40.0 38.0 41.0 34.0 41.0 16 38.56500481239547 40.0 38.0 41.0 34.0 41.0 17 38.52984474107735 40.0 38.0 41.0 34.0 41.0 18 38.38177482722711 40.0 38.0 41.0 34.0 41.0 19 38.17211216826028 40.0 37.0 41.0 34.0 41.0 20 38.110458282053706 40.0 37.0 41.0 34.0 41.0 21 38.11137539840323 40.0 37.0 41.0 34.0 41.0 22 38.180492442172365 40.0 37.0 41.0 34.0 41.0 23 38.169613272744485 40.0 37.0 41.0 34.0 41.0 24 38.14647038404494 40.0 36.0 41.0 34.0 41.0 25 37.93721993436208 40.0 36.0 41.0 34.0 41.0 26 37.95890727066175 40.0 36.0 41.0 34.0 41.0 27 37.91692306478589 40.0 36.0 41.0 34.0 41.0 28 37.83608073779545 40.0 36.0 41.0 33.0 41.0 29 37.792595616775536 40.0 36.0 41.0 33.0 41.0 30 37.596232131023385 40.0 36.0 41.0 33.0 41.0 31 37.51755538199375 40.0 36.0 41.0 33.0 41.0 32 37.30594015273439 40.0 36.0 41.0 33.0 41.0 33 37.04865252926883 40.0 36.0 41.0 31.0 41.0 34 36.78710672473098 40.0 36.0 41.0 31.0 41.0 35 36.69502627094575 40.0 36.0 41.0 30.0 41.0 36 36.547540155890054 40.0 36.0 41.0 30.0 41.0 37 36.46769383697813 40.0 35.0 41.0 30.0 41.0 38 36.3678602985263 40.0 35.0 41.0 29.0 41.0 39 36.29705299946354 40.0 35.0 41.0 29.0 41.0 40 36.233681245858186 40.0 35.0 41.0 29.0 41.0 41 36.10627307583073 39.0 35.0 41.0 27.0 41.0 42 36.106501861844805 40.0 35.0 41.0 28.0 41.0 43 36.02460830256556 39.0 35.0 41.0 27.0 41.0 44 36.01313152829057 39.0 35.0 41.0 27.0 41.0 45 36.051530105083785 39.0 35.0 41.0 27.0 41.0 46 35.92499171636845 39.0 35.0 41.0 27.0 41.0 47 35.7902051973871 39.0 35.0 41.0 26.0 41.0 48 35.74987180094039 39.0 35.0 41.0 26.0 41.0 49 35.73842461106378 39.0 35.0 41.0 26.0 41.0 50 35.618789248635174 39.0 35.0 41.0 26.0 41.0 51 34.549165325507275 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 17.0 10 12.0 11 16.0 12 6.0 13 8.0 14 9.0 15 8.0 16 30.0 17 58.0 18 127.0 19 292.0 20 569.0 21 1042.0 22 1698.0 23 2432.0 24 3823.0 25 5717.0 26 7661.0 27 7932.0 28 7144.0 29 6902.0 30 7410.0 31 9159.0 32 11772.0 33 16350.0 34 25450.0 35 34058.0 36 36180.0 37 55852.0 38 95239.0 39 169918.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.10782132601218 19.373244659029947 22.57723500268232 14.941699012275553 2 36.374215027296536 25.70489759853577 22.647251412161946 15.273635962005743 3 28.77634983748304 25.57018997128341 30.26010603048376 15.393354160749787 4 25.858144782101043 23.02652339928682 33.69958818517467 17.41574363343747 5 22.975243775442582 34.74332575972735 26.28337120136325 15.998059263466818 6 22.13958313610401 34.92162106724731 29.11144245637287 13.827353340275806 7 73.73082930985515 4.781036006185111 16.905708605509798 4.582426078449935 8 74.57714033260753 6.79297232478147 13.714932626463442 4.914954716147559 9 69.2428760768721 6.028314241534917 15.233203950897789 9.495605730695193 10 35.274464325160146 23.54247530688883 25.266851273312508 15.916209094638518 11 26.956120420335132 24.155661270472404 29.21380447473887 19.674413834453595 12 22.088895200227206 21.702917416138092 34.86541071034112 21.342776673293574 13 22.627922938559124 23.33577897693206 37.23176812143015 16.80452996307867 14 19.87953232983054 28.16217772728707 33.38106282937297 18.57722711350942 15 18.340946385180978 25.53961942629935 37.97828110700874 18.141153081510936 16 20.346768594780524 25.336275994824703 32.68109596389914 21.63585944649563 17 20.707106566947523 25.80134273722743 31.860819211713842 21.630731484111205 18 21.280846666035533 24.92110827100887 33.34654769793935 20.45149736501625 19 20.047374483259176 27.490217425605103 31.1139117674903 21.34849632364543 20 20.924256050995613 26.88886522137019 33.36725677679952 18.819621950834676 21 20.528219571460127 28.69233014610748 32.593526144718986 18.185924137713403 22 19.11467701726151 24.43986872416296 33.15503802581337 23.290416232762155 23 18.666177537946922 27.010555713339013 32.380912935087885 21.942353813626177 24 20.160978573006403 25.454219129666445 32.491361355675465 21.893440941651676 25 18.812127236580515 29.06391018965572 30.634447284546688 21.489515289217078 26 18.193813310612516 26.448057685632236 33.74002019628262 21.618108807472623 27 21.091309287134337 26.49874562150904 30.992615734166428 21.417329357190194 28 18.888849443024395 26.062277130865603 33.69603805737007 21.352835368739942 29 19.41486004607277 24.071838808419326 34.2455189497933 22.2677821957146 30 19.8505396194263 27.60579380857711 32.614037994256684 19.929628577739912 31 22.097376061093755 25.945122913313767 29.726009025213795 22.23149200037868 32 21.363091293508788 26.635622771308654 30.100744737921676 21.90054119726088 33 21.130755151629906 26.02164789043517 30.48514468743097 22.36245227050396 34 22.727720975732904 24.731965350752628 30.984529331944838 21.55578434156963 35 22.152008583420113 26.516299031209567 29.5258212628988 21.805871122471522 36 22.75059957714033 28.06021016756603 29.673348796112215 19.51584145918142 37 21.204913376881567 27.841680078260595 29.95873962573764 20.9946669191202 38 21.84216131780744 26.73482912051501 28.600421281832812 22.82258827984474 39 22.864795354854998 25.492481618227146 29.339834011802203 22.302889015115653 40 22.917652813279055 24.219760800277697 31.384313168607402 21.47827321783584 41 21.525805484552997 27.2517671747294 28.688188330335446 22.53423901038215 42 22.343321026223613 26.192842942345923 30.394024740446213 21.06981129098425 43 21.295047177253938 26.838374514815865 29.68261857426867 22.183959733661524 44 20.85068951371138 25.147921991858375 30.164055350437057 23.837333143993185 45 20.941217772728706 24.060202278393135 29.542191296664456 25.4563886522137 46 23.66041844173057 25.273359840954274 29.119923317239422 21.946298400075737 47 20.300025245353275 25.14141342421661 33.05681782321941 21.501743507210705 48 21.147322414718044 25.153049954242796 30.042759317113195 23.65686831392597 49 21.34297390261605 23.133421692069803 32.6521032534949 22.871501151819242 50 20.802171100381837 23.235980939758274 32.214648616239074 23.747199343620814 51 20.828797058916344 22.789650982990945 29.784191675344758 26.597360282747957 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 166.0 1 249.5 2 333.0 3 4213.0 4 8093.0 5 5596.0 6 3099.0 7 3088.0 8 3077.0 9 3023.0 10 2969.0 11 2975.0 12 2981.0 13 2929.5 14 2878.0 15 2773.0 16 2668.0 17 2506.5 18 2345.0 19 2339.0 20 2333.0 21 2298.5 22 2264.0 23 2312.5 24 2361.0 25 2777.5 26 3483.5 27 3773.0 28 4304.0 29 4835.0 30 6203.0 31 7571.0 32 8561.0 33 9551.0 34 11000.5 35 12450.0 36 14315.0 37 16180.0 38 17730.5 39 19281.0 40 21202.0 41 23123.0 42 26120.5 43 29118.0 44 33417.0 45 37716.0 46 50499.0 47 63282.0 48 60879.0 49 58476.0 50 56365.5 51 54255.0 52 46247.0 53 38239.0 54 32931.0 55 27623.0 56 23528.5 57 19434.0 58 17034.0 59 14634.0 60 12552.0 61 10470.0 62 9176.5 63 7883.0 64 6295.5 65 4708.0 66 3600.5 67 2493.0 68 2040.0 69 1587.0 70 1152.5 71 718.0 72 560.0 73 402.0 74 315.0 75 177.5 76 127.0 77 80.0 78 33.0 79 42.5 80 52.0 81 30.0 82 8.0 83 6.0 84 4.0 85 5.0 86 6.0 87 3.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 507024.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.25207804771357 #Duplication Level Percentage of deduplicated Percentage of total 1 76.76651947035498 35.50611049994182 2 9.661257627916498 8.93706483690924 3 3.7749688095811313 5.238004560252926 4 2.0297929562249175 3.7552856892805653 5 1.3726627243090601 3.174425172896489 6 1.0052569067486172 2.7897132545364096 7 0.7970453335432192 2.5805502082224803 8 0.6638468490777385 2.4563437020217833 9 0.552097903920653 2.29821078079054 >10 3.311181819822074 24.626090239595026 >50 0.039995872768625575 1.265286501898234 >100 0.017202525920305557 1.4916496583892322 >500 0.004300631480076389 1.3880159109534689 >1k 0.0038705683320687505 4.493248984311824 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTC 4552 0.8977878759190887 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4073 0.8033150304522073 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGC 3777 0.7449351509987693 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCG 3526 0.6954305910568336 No Hit GCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGC 2010 0.3964309381804412 No Hit CGCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTG 1310 0.25837041244595915 No Hit CCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGC 1292 0.2548202846413582 No Hit GAACTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCT 1032 0.20354066079712202 No Hit CTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGCT 1017 0.20058222095995457 Illumina Single End Adapter 2 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTT 955 0.188354002966329 No Hit CGTTCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTC 900 0.17750639023004827 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCT 821 0.1619252737542996 No Hit GAATGCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTT 763 0.1504859730505854 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCT 647 0.12760737164315694 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGCTGGAT 641 0.12642399570828994 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTC 621 0.12247940925873332 No Hit CGTCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCT 595 0.11735144687430969 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 524 0.10334816497838367 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGCTGGATCGTA 511 0.10078418378617186 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.9445864495566286E-4 0.0 0.0 0.2064991006342895 0.0 2 3.9445864495566286E-4 0.0 0.0 1.0259869355296791 0.0 3 3.9445864495566286E-4 0.0 0.0 1.5377970273596515 0.0 4 3.9445864495566286E-4 0.0 0.0 2.2421029379279878 0.0 5 3.9445864495566286E-4 0.0 0.0 4.459552210546247 0.0 6 3.9445864495566286E-4 0.0 0.0 5.871516930165042 0.0 7 3.9445864495566286E-4 0.0 0.0 6.980537410457887 0.0 8 3.9445864495566286E-4 0.0 0.0 8.476127362807283 0.0 9 3.9445864495566286E-4 0.0 0.0 9.076296191107325 0.0 10 3.9445864495566286E-4 0.0 0.0 11.015652119031841 0.0 11 3.9445864495566286E-4 0.0 0.0 12.582639086118212 0.0 12 3.9445864495566286E-4 0.0 0.0 14.581361040108556 0.0 13 3.9445864495566286E-4 0.0 0.0 15.200858342011424 0.0 14 3.9445864495566286E-4 0.0 0.0 15.48762977689419 0.0 15 3.9445864495566286E-4 0.0 0.0 15.96058569219603 0.0 16 3.9445864495566286E-4 0.0 0.0 16.76823976774275 0.0 17 3.9445864495566286E-4 0.0 0.0 17.767009056770487 0.0 18 3.9445864495566286E-4 0.0 0.0 18.813902300482816 0.0 19 3.9445864495566286E-4 0.0 0.0 19.607947552778565 0.0 20 3.9445864495566286E-4 0.0 0.0 20.231192211808516 0.0 21 3.9445864495566286E-4 0.0 0.0 20.986186058253654 0.0 22 3.9445864495566286E-4 0.0 0.0 21.835258291520717 0.0 23 3.9445864495566286E-4 0.0 0.0 22.71983180283379 0.0 24 3.9445864495566286E-4 0.0 0.0 23.373252548202846 0.0 25 3.9445864495566286E-4 0.0 0.0 23.99294707942819 0.0 26 3.9445864495566286E-4 1.9722932247783143E-4 0.0 24.56708163716116 0.0 27 3.9445864495566286E-4 1.9722932247783143E-4 0.0 25.163305879011645 0.0 28 3.9445864495566286E-4 1.9722932247783143E-4 0.0 25.744343463031335 0.0 29 3.9445864495566286E-4 1.9722932247783143E-4 0.0 26.347076272523587 0.0 30 3.9445864495566286E-4 1.9722932247783143E-4 0.0 27.00897787875919 0.0 31 3.9445864495566286E-4 1.9722932247783143E-4 0.0 27.649775947489665 0.0 32 3.9445864495566286E-4 1.9722932247783143E-4 0.0 28.273809523809526 0.0 33 3.9445864495566286E-4 1.9722932247783143E-4 0.0 28.8852204234908 0.0 34 3.9445864495566286E-4 1.9722932247783143E-4 0.0 29.479669601438985 0.0 35 3.9445864495566286E-4 1.9722932247783143E-4 0.0 30.05419861781691 0.0 36 3.9445864495566286E-4 1.9722932247783143E-4 0.0 30.62892486351731 0.0 37 3.9445864495566286E-4 3.9445864495566286E-4 0.0 31.210554135504434 0.0 38 3.9445864495566286E-4 3.9445864495566286E-4 0.0 31.778969042885542 0.0 39 3.9445864495566286E-4 3.9445864495566286E-4 0.0 32.37203761557638 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAA 70 0.0 45.0 31 AGTCCGC 20 7.0295535E-4 45.0 40 TTGGACG 20 7.0295535E-4 45.0 1 GTCGAAG 20 7.0295535E-4 45.0 1 CCGATCG 55 1.8189894E-12 45.0 40 GCGCGAG 25 3.8877104E-5 45.0 1 TCGATTG 20 7.0295535E-4 45.0 1 TAACGCG 20 7.0295535E-4 45.0 1 CCCCGAT 50 2.1827873E-11 45.0 38 AGGTTCG 20 7.0295535E-4 45.0 1 CTACGAA 20 7.0295535E-4 45.0 11 TACGACG 20 7.0295535E-4 45.0 1 TTGCGCG 20 7.0295535E-4 45.0 1 AACGAGC 25 3.8877104E-5 45.0 15 TATAGCG 20 7.0295535E-4 45.0 1 CGCACGG 20 7.0295535E-4 45.0 2 GCTACGA 20 7.0295535E-4 45.0 10 TAATGCG 20 7.0295535E-4 45.0 1 TCGAAAG 25 3.8877104E-5 45.0 1 CGCCCGG 25 3.8877104E-5 45.0 2 >>END_MODULE