##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935831.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 669686 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99755109110837 33.0 31.0 34.0 30.0 34.0 2 32.16248809143389 33.0 31.0 34.0 30.0 34.0 3 31.95798030718874 33.0 31.0 34.0 30.0 34.0 4 35.69242002968556 37.0 35.0 37.0 33.0 37.0 5 32.24036787389911 37.0 35.0 37.0 10.0 37.0 6 33.931853137141886 37.0 35.0 37.0 19.0 37.0 7 35.49905179442306 37.0 35.0 37.0 32.0 37.0 8 35.748780771884135 37.0 35.0 37.0 35.0 37.0 9 37.674047240049816 39.0 37.0 39.0 35.0 39.0 10 37.39915572372724 39.0 37.0 39.0 34.0 39.0 11 37.34973256123019 39.0 37.0 39.0 34.0 39.0 12 37.233946954244225 39.0 37.0 39.0 34.0 39.0 13 37.18417437425898 39.0 37.0 39.0 34.0 39.0 14 38.30006450784398 40.0 38.0 41.0 33.0 41.0 15 38.46091750462157 40.0 38.0 41.0 34.0 41.0 16 38.42491854391461 40.0 38.0 41.0 34.0 41.0 17 38.43226228411524 40.0 38.0 41.0 34.0 41.0 18 38.18468655459424 40.0 37.0 41.0 34.0 41.0 19 37.89569589329925 39.0 37.0 41.0 34.0 41.0 20 37.78073156673426 39.0 35.0 41.0 34.0 41.0 21 37.66618385332828 39.0 35.0 41.0 33.0 41.0 22 37.72042569204075 39.0 35.0 41.0 34.0 41.0 23 37.74928100632236 39.0 35.0 41.0 34.0 41.0 24 37.69632036506661 39.0 35.0 41.0 34.0 41.0 25 37.41139728171113 39.0 35.0 41.0 33.0 41.0 26 37.4476590521528 39.0 35.0 41.0 33.0 41.0 27 37.41315034210063 39.0 35.0 41.0 33.0 41.0 28 37.26687880588813 39.0 35.0 41.0 33.0 41.0 29 37.171580412312636 39.0 35.0 41.0 33.0 41.0 30 36.903744441424784 39.0 35.0 41.0 32.0 41.0 31 36.70666700513375 39.0 35.0 41.0 31.0 41.0 32 36.40603656041787 39.0 35.0 41.0 31.0 41.0 33 36.037501157258774 39.0 35.0 41.0 29.0 41.0 34 35.643746472227285 39.0 35.0 41.0 26.0 41.0 35 35.42317444294789 39.0 35.0 41.0 24.0 41.0 36 35.25805078798123 39.0 35.0 41.0 23.0 41.0 37 35.160198958915075 39.0 35.0 41.0 23.0 41.0 38 35.01431566435613 38.0 35.0 41.0 23.0 41.0 39 34.88267635877113 38.0 35.0 41.0 22.0 41.0 40 34.79353159540441 38.0 35.0 41.0 21.0 41.0 41 34.61339493434237 38.0 34.0 40.0 21.0 41.0 42 34.60131165949415 38.0 34.0 40.0 21.0 41.0 43 34.53558832049647 38.0 34.0 40.0 20.0 41.0 44 34.482479848764946 38.0 34.0 40.0 20.0 41.0 45 34.4659064098697 38.0 34.0 40.0 20.0 41.0 46 34.35234572620601 38.0 34.0 40.0 20.0 41.0 47 34.29857276395206 37.0 34.0 40.0 20.0 41.0 48 34.24681268534806 37.0 34.0 40.0 20.0 41.0 49 34.19342348503627 37.0 34.0 40.0 20.0 41.0 50 34.09418891838862 37.0 34.0 40.0 20.0 41.0 51 33.118274833280076 35.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 8.0 8 11.0 9 31.0 10 29.0 11 19.0 12 15.0 13 18.0 14 26.0 15 41.0 16 66.0 17 174.0 18 299.0 19 492.0 20 963.0 21 1397.0 22 2253.0 23 3534.0 24 5843.0 25 9655.0 26 13652.0 27 15756.0 28 14947.0 29 13478.0 30 13367.0 31 14502.0 32 18168.0 33 25973.0 34 43340.0 35 50335.0 36 53129.0 37 74571.0 38 116245.0 39 177239.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.10099061351141 17.965135899511115 20.57143198454201 23.36244150243547 2 42.73301218780144 20.81587490256628 21.2271124079046 15.224000501727675 3 28.85621022389597 21.16290321135577 34.84229922680181 15.13858733794644 4 25.86884002353342 22.04032934838118 34.93069886484113 17.160131763244266 5 20.819906642814693 32.76445976173908 30.07902210886893 16.33661148657729 6 22.879976586041817 29.59073356767201 33.064749748389545 14.464540097896625 7 69.9468108934635 4.968298575750427 19.918140740585887 5.166749790200184 8 71.20725235408834 4.569753586008965 19.384607114378976 4.838386945523723 9 65.12484955635925 5.732238690968603 21.58115893120059 7.561752821471555 10 37.617779078553234 19.659661393548618 27.5240933810771 15.198466146821046 11 27.509758304638293 20.632505383119852 33.08296724136387 18.774769070877994 12 24.481772054365777 17.9821588027822 37.58447989057559 19.951589252276438 13 23.234321756763617 17.607356283392512 40.188088148774206 18.970233811069665 14 18.56481993053461 21.03732196880329 40.54571844117989 19.852139659482205 15 17.93273265381089 21.017909886125736 41.11792690902901 19.931430551034364 16 22.209513115101704 21.837697069970105 37.07035834704623 18.882431467881965 17 22.260731148627862 22.06795423526847 35.19739101608813 20.473923600015528 18 22.530111126707144 22.017632144019736 35.74511039502095 19.707146334252172 19 21.41720149443172 23.986166651236548 33.96845685888611 20.62817499544563 20 21.41585758101558 24.805057892803493 33.71893693462309 20.060147591557833 21 22.04062799580699 24.08934933685339 35.64133041455249 18.228692252787127 22 21.127662815110366 21.07420492589064 36.65434248289497 21.143789776104025 23 20.47914992996718 22.33180923597029 35.95296900338368 21.236071830678853 24 20.98237084245452 22.190996974701577 35.36493222196671 21.461699960877187 25 22.32688155344445 23.01556251735888 33.23617337080363 21.421382558393038 26 20.117039926174357 22.137688409194755 33.970248743440955 23.77502292118993 27 20.98237084245452 21.269818989795215 34.88993349121827 22.857876676531987 28 20.167511341135995 22.218024566737245 34.54245721129007 23.07200688083669 29 21.27773314657914 21.88936307463498 33.903501043772756 22.929402735013127 30 22.678389573621068 20.387913141382676 35.02447415654501 21.909223128451245 31 22.815020770928466 20.86858617322148 35.009541785254584 21.306851270595473 32 24.043805604417592 21.144835042094353 33.546766693644486 21.26459265984357 33 24.94676609634963 20.532458495474 32.88884641458833 21.63192899358804 34 22.82248695657368 21.701215196375614 34.364612669221096 21.11168517782961 35 22.4233446719806 22.944036458877743 33.11178671795438 21.52083215118727 36 23.518783429846227 24.2545013633255 31.01976150016575 21.206953706662528 37 22.729010312295614 25.010527321759753 31.29421848448377 20.966243881460862 38 22.67062474055005 24.196115791579935 31.198352660799237 21.934906807070774 39 23.096794617178798 23.630029595959897 30.195345281221346 23.077830505639955 40 24.18058612543789 22.49307884590689 31.718447152844764 21.607887875810455 41 21.02194162637415 24.249125709660944 31.337522361226007 23.391410302738898 42 21.057928641184077 24.77937421418396 31.68350540402517 22.47919174060679 43 21.142445862687886 23.717085320583077 32.36113641318469 22.77933240354435 44 22.618062793607752 22.633293812323984 31.24538963036408 23.503253763704183 45 22.184874702472502 22.025695624516565 30.887908661671293 24.901521011339643 46 22.520255761655463 22.54429687943305 31.00647168971727 23.92897566919422 47 21.381662450760505 22.738268382495676 32.71772143960005 23.162347727143768 48 20.66371403911684 22.858175323957795 33.216462640700264 23.261647996225097 49 21.849642967002445 21.96686208163229 33.10118473433818 23.082310217027086 50 20.73986913269801 21.715699596527326 34.201700498442555 23.342730772332107 51 20.359093664792155 21.581606902339306 33.216462640700264 24.842836792168267 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 235.0 1 569.0 2 903.0 3 14090.5 4 27278.0 5 17552.0 6 7826.0 7 7579.5 8 7333.0 9 7267.5 10 7202.0 11 6965.5 12 6729.0 13 6414.0 14 6099.0 15 5703.5 16 5308.0 17 4923.0 18 4538.0 19 4249.5 20 3961.0 21 3845.5 22 3730.0 23 3709.0 24 3688.0 25 3734.0 26 4069.5 27 4359.0 28 4907.0 29 5455.0 30 6322.5 31 7190.0 32 8197.0 33 9204.0 34 10448.0 35 11692.0 36 12868.0 37 14044.0 38 15181.5 39 16319.0 40 18040.0 41 19761.0 42 22110.5 43 24460.0 44 27963.0 45 31466.0 46 41809.5 47 52153.0 48 55357.5 49 58562.0 50 59474.0 51 60386.0 52 54286.5 53 48187.0 54 43843.0 55 39499.0 56 38036.0 57 36573.0 58 34818.0 59 33063.0 60 30497.0 61 27931.0 62 25411.0 63 22891.0 64 20591.5 65 18292.0 66 15818.5 67 13345.0 68 11540.0 69 9735.0 70 8133.0 71 6531.0 72 5534.5 73 4538.0 74 3658.0 75 2152.5 76 1527.0 77 1106.0 78 685.0 79 477.5 80 270.0 81 178.5 82 87.0 83 67.0 84 47.0 85 36.0 86 25.0 87 17.5 88 10.0 89 9.0 90 8.0 91 5.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 669686.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.63654936259083 #Duplication Level Percentage of deduplicated Percentage of total 1 72.34853073729059 30.8469170209141 2 9.28331955509432 7.916174249189674 3 4.263922033403462 5.453967667663361 4 2.734528875819536 4.663635015892386 5 2.1540598727964126 4.592084004823018 6 1.754308716557124 4.487860211442669 7 1.4273039855489753 4.259872178469705 8 1.2484956103558518 4.258523577593219 9 1.0580998286501682 4.060235301731261 >10 3.6615948362929056 21.059900876545047 >50 0.03858128331843368 1.1584230084332099 >100 0.020175531139168677 1.4928503631839418 >500 0.004247480239824677 1.2337294499624138 >1k 0.002477696806564395 2.1183926959171133 >5k 0.0 0.0 >10k+ 3.5395668665205645E-4 2.3974343782388874 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15886 2.372156503197021 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTT 2989 0.4463285778708231 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC 2289 0.3418019788378434 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC 2070 0.3091000857118112 No Hit CGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 2028 0.3028284897698324 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1847 0.27580089773416194 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCT 1712 0.25564219649208736 No Hit CGTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT 1102 0.1645547316204908 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 852 0.12722380339442665 No Hit GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 826 0.12334138685891596 No Hit CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 791 0.11811505690726698 No Hit GAACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT 712 0.1063184835878307 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTC 706 0.10542254131040518 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCC 699 0.10437727532007539 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4797113871276986E-4 0.0 0.0 0.10228674333941579 0.0 2 4.4797113871276986E-4 0.0 0.0 0.3900335381059183 0.0 3 4.4797113871276986E-4 0.0 0.0 0.8708558936576246 0.0 4 4.4797113871276986E-4 0.0 0.0 1.3681038576287992 0.0 5 4.4797113871276986E-4 0.0 0.0 2.7448684906060454 0.0 6 4.4797113871276986E-4 0.0 0.0 4.6206729721093165 0.0 7 4.4797113871276986E-4 0.0 0.0 5.894852214321339 0.0 8 4.4797113871276986E-4 0.0 0.0 7.397646060989778 0.0 9 4.4797113871276986E-4 0.0 0.0 8.47860041870369 0.0 10 4.4797113871276986E-4 0.0 0.0 9.767562708493234 0.0 11 4.4797113871276986E-4 0.0 0.0 10.935722114543234 0.0 12 5.972948516170265E-4 0.0 0.0 11.901846537033775 0.0 13 5.972948516170265E-4 0.0 0.0 12.441651759182662 0.0 14 5.972948516170265E-4 0.0 0.0 12.861699363582336 0.0 15 5.972948516170265E-4 0.0 0.0 13.147803597506892 0.0 16 5.972948516170265E-4 0.0 0.0 13.481094124709193 0.0 17 5.972948516170265E-4 0.0 0.0 13.82797310978578 0.0 18 7.466185645212831E-4 0.0 0.0 14.242495736807996 0.0 19 7.466185645212831E-4 0.0 0.0 14.539351278061659 0.0 20 7.466185645212831E-4 0.0 0.0 14.84322503382182 0.0 21 7.466185645212831E-4 0.0 0.0 15.152474443246536 0.0 22 7.466185645212831E-4 0.0 0.0 15.49950275203603 0.0 23 7.466185645212831E-4 0.0 0.0 15.831748013248 0.0 24 7.466185645212831E-4 0.0 0.0 16.12681166994681 0.0 25 7.466185645212831E-4 0.0 0.0 16.404404452235823 0.0 26 7.466185645212831E-4 0.0 0.0 16.693793807844273 0.0 27 7.466185645212831E-4 0.0 0.0 17.016183704004565 0.0 28 7.466185645212831E-4 0.0 0.0 17.301839966790407 0.0 29 7.466185645212831E-4 0.0 0.0 17.61810759072162 1.4932371290425663E-4 30 7.466185645212831E-4 0.0 0.0 18.071753030524754 1.4932371290425663E-4 31 8.959422774255397E-4 0.0 0.0 18.40355032059801 1.4932371290425663E-4 32 8.959422774255397E-4 0.0 0.0 18.787760233900663 1.4932371290425663E-4 33 8.959422774255397E-4 0.0 0.0 19.162712077003253 1.4932371290425663E-4 34 8.959422774255397E-4 0.0 0.0 19.53452812213485 1.4932371290425663E-4 35 8.959422774255397E-4 0.0 0.0 19.902013779592227 1.4932371290425663E-4 36 8.959422774255397E-4 0.0 0.0 20.22305976233638 1.4932371290425663E-4 37 8.959422774255397E-4 0.0 0.0 20.58621503211953 1.4932371290425663E-4 38 0.0010452659903297963 0.0 0.0 21.02955713573227 1.4932371290425663E-4 39 0.0010452659903297963 0.0 0.0 21.728989406975806 1.4932371290425663E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 30 2.164139E-6 45.000004 1 ACCGCGT 20 7.0311746E-4 45.0 23 CGCATCG 20 7.0311746E-4 45.0 21 TTAACGG 25 3.8890557E-5 45.0 2 ACGTCCC 20 7.0311746E-4 45.0 43 TACGTAG 20 7.0311746E-4 45.0 1 TCACGAC 65 0.0 44.999996 25 CGTTATT 795 0.0 44.71698 1 CGTTTTT 7195 0.0 43.092422 1 TACGGGA 180 0.0 42.5 4 TTACGGG 155 0.0 42.096775 3 CTCACGA 70 0.0 41.785713 24 CTTACGG 55 6.002665E-11 40.90909 2 CACAACG 150 0.0 40.500004 12 CGTTTCT 345 0.0 40.434784 1 GTTATTT 910 0.0 40.054943 2 CGTTAGG 90 0.0 40.0 2 CGGTCTA 75 0.0 39.000004 31 TAACGGG 145 0.0 38.793102 3 CATAGCG 35 6.244385E-6 38.571426 1 >>END_MODULE