##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935828.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 127971 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.911831586843896 33.0 31.0 34.0 30.0 34.0 2 32.02104383024279 33.0 31.0 34.0 30.0 34.0 3 31.987317439107297 33.0 31.0 34.0 30.0 34.0 4 35.65262442272077 37.0 35.0 37.0 33.0 37.0 5 32.20086582116261 37.0 35.0 37.0 10.0 37.0 6 33.885106782005295 37.0 35.0 37.0 19.0 37.0 7 35.45565792249807 37.0 35.0 37.0 32.0 37.0 8 35.61710856365895 37.0 35.0 37.0 33.0 37.0 9 37.573137664002 39.0 37.0 39.0 35.0 39.0 10 37.285619398144895 39.0 37.0 39.0 34.0 39.0 11 37.24003875878129 39.0 37.0 39.0 34.0 39.0 12 37.030819482539016 39.0 35.0 39.0 34.0 39.0 13 36.78595150463777 39.0 35.0 39.0 33.0 39.0 14 37.930382664822496 40.0 36.0 41.0 33.0 41.0 15 38.06024802494315 40.0 36.0 41.0 33.0 41.0 16 38.102195028561155 40.0 36.0 41.0 34.0 41.0 17 38.08891858311649 40.0 36.0 41.0 34.0 41.0 18 38.073813598393386 40.0 36.0 41.0 34.0 41.0 19 37.94774597369717 40.0 36.0 41.0 34.0 41.0 20 37.95643544240492 40.0 36.0 41.0 34.0 41.0 21 37.96721913558541 40.0 36.0 41.0 34.0 41.0 22 38.0552312633331 40.0 36.0 41.0 34.0 41.0 23 38.04610419548179 40.0 36.0 41.0 34.0 41.0 24 38.01808222175337 40.0 36.0 41.0 34.0 41.0 25 37.79861062271921 40.0 35.0 41.0 34.0 41.0 26 37.77530065405443 40.0 35.0 41.0 34.0 41.0 27 37.75488977971572 40.0 35.0 41.0 33.0 41.0 28 37.705597361902306 40.0 36.0 41.0 33.0 41.0 29 37.71101265130381 40.0 36.0 41.0 33.0 41.0 30 37.608465980573726 40.0 36.0 41.0 33.0 41.0 31 37.58216314633784 40.0 35.0 41.0 33.0 41.0 32 37.42698736432473 40.0 35.0 41.0 33.0 41.0 33 37.324917364090304 39.0 35.0 41.0 33.0 41.0 34 37.27167092544405 40.0 35.0 41.0 33.0 41.0 35 37.27597658844582 40.0 35.0 41.0 33.0 41.0 36 37.119527080354146 39.0 35.0 41.0 32.0 41.0 37 37.02738120355393 39.0 35.0 41.0 32.0 41.0 38 36.907807237577266 39.0 35.0 41.0 32.0 41.0 39 36.8814731462597 39.0 35.0 41.0 32.0 41.0 40 36.81402036398872 39.0 35.0 41.0 31.0 41.0 41 36.716435754975734 39.0 35.0 41.0 31.0 41.0 42 36.72155410210126 39.0 35.0 41.0 31.0 41.0 43 36.6069421978417 39.0 35.0 41.0 31.0 41.0 44 36.601956693313326 39.0 35.0 41.0 31.0 41.0 45 36.6383633792031 39.0 35.0 41.0 31.0 41.0 46 36.51927389799251 39.0 35.0 41.0 31.0 41.0 47 36.340788147314626 39.0 35.0 40.0 31.0 41.0 48 36.35121238405576 39.0 35.0 40.0 31.0 41.0 49 36.36839596471076 39.0 35.0 40.0 31.0 41.0 50 36.23113830477217 38.0 35.0 40.0 31.0 41.0 51 35.05783341538317 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 2.0 10 2.0 11 3.0 12 0.0 13 3.0 14 1.0 15 3.0 16 7.0 17 10.0 18 23.0 19 54.0 20 101.0 21 198.0 22 325.0 23 438.0 24 578.0 25 721.0 26 919.0 27 1049.0 28 1239.0 29 1450.0 30 1866.0 31 2548.0 32 3331.0 33 5181.0 34 8774.0 35 12757.0 36 9370.0 37 14337.0 38 24027.0 39 38628.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.57852169632182 19.677895773261127 22.16986661040392 11.573715920013129 2 30.56161161513155 28.245461862453215 24.320353830164645 16.872572692250586 3 29.980229895835777 28.47832712098835 26.02230192778051 15.519141055395364 4 26.067624696220236 24.218768314696298 31.46181556758953 18.25179142149393 5 24.66027459346258 34.35622133139539 23.063819146525386 17.91968492861664 6 22.57386439115112 36.23946050277016 25.41200740792836 15.774667698150363 7 74.48328136843504 4.952684592603012 14.885403724281282 5.678630314680669 8 72.47892100554031 8.977815286275796 11.142368192793679 7.400895515390206 9 67.72237460049543 6.125606582741402 13.358495284087802 12.793523532675371 10 39.81917778246634 23.904634643786483 20.740636550468466 15.535551023278712 11 31.503231200818938 22.301146353470706 25.479210133545884 20.716412312164476 12 28.157942033742017 19.007431371170032 30.72961842917536 22.10500816591259 13 23.716310726649006 27.05925561259973 33.00747825679255 16.21695540395871 14 17.878269295387238 32.529244907049254 28.368927335099357 21.22355846246415 15 15.209695946737934 23.976525931656393 40.830344374897436 19.983433746708236 16 16.05754428737761 25.231497761211525 33.358338998679386 25.352618952731476 17 16.961655375045908 23.864000437599145 29.97163419837307 29.20270998898188 18 18.78472466418173 24.854068499894506 32.70584741855577 23.655359417367997 19 19.516921802595903 26.019176219612255 29.09721733830321 25.366684639488636 20 21.96825843355135 25.883989341335145 31.885349024388336 20.262403200725167 21 19.709934281985763 29.03079603972775 30.602245821318892 20.657023856967594 22 16.84287846465215 25.136945089121753 29.898961483461093 28.121214962765002 23 16.77098717678224 28.109493557134037 29.845043017558666 25.27447624852506 24 21.25637839823085 24.260965374967768 30.0450883403271 24.43756788647428 25 16.881168389713295 30.130263887912108 27.98055809519344 25.00800962718116 26 16.892108368302196 29.15113580420564 29.488712286377382 24.468043541114785 27 22.54026302834236 28.118870681638807 27.238202405232435 22.1026638847864 28 17.049956630799166 27.178813950035558 33.148916551406174 22.6223128677591 29 18.07362605590329 26.68104492424065 30.96482796883669 24.28050105101937 30 22.182369443076947 26.95923295121551 30.263887912105087 20.594509693602454 31 25.690195434903217 26.516163818365097 23.00911925358089 24.78452149315079 32 24.999413929718454 31.262551671863157 24.001531597002447 19.736502801415945 33 22.77390971391956 24.539153401942627 28.52364988942807 24.16328699470974 34 21.164951434309337 25.966820607793956 26.977205773182988 25.891022184713723 35 23.012244961749147 24.661837447546713 27.214759593970513 25.111157996733635 36 25.573762805635653 24.693094529229278 30.30764782646068 19.425494838674386 37 23.342007173500246 25.61752271999125 30.638191465253843 20.40227864125466 38 22.389447609223964 26.08325323706152 27.59140742824546 23.93589172546905 39 20.605449672191355 25.208836376991663 31.00936931023435 23.176344640582634 40 23.412335607286025 22.417578982738277 30.84605105844293 23.32403435153277 41 20.49292417813411 23.350602870962952 27.801611302560737 28.3548616483422 42 25.08771518547171 21.77680880824562 29.94897281415321 23.186503192129468 43 24.82828140750639 23.041939189347588 29.464488048073388 22.665291355072632 44 21.770557391909104 24.034351532769143 29.577013542130636 24.618077533191112 45 21.03445311828461 23.473286916567034 27.64454446710583 27.847715498042525 46 26.235631510264046 24.203139773855014 27.79926702143454 21.7619616944464 47 19.40361488149659 23.219323127896164 34.08272186667291 23.29434012393433 48 21.547069257878736 21.57676348547718 30.15370669917403 26.72246055747005 49 21.468926553672315 19.36688781051957 35.3103437497558 23.85384188605231 50 22.042494002547453 20.45228997194677 32.377648060888795 25.127567964616983 51 20.37492869478241 20.870353439451126 27.35932359675239 31.39539426901407 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 102.0 1 149.5 2 197.0 3 390.5 4 584.0 5 382.0 6 180.0 7 186.5 8 193.0 9 208.5 10 224.0 11 261.5 12 299.0 13 266.5 14 234.0 15 260.5 16 287.0 17 271.5 18 256.0 19 234.5 20 213.0 21 245.0 22 277.0 23 330.5 24 384.0 25 475.0 26 692.5 27 819.0 28 855.5 29 892.0 30 1193.5 31 1495.0 32 1965.0 33 2435.0 34 2535.5 35 2636.0 36 2674.5 37 2713.0 38 3369.5 39 4026.0 40 4737.5 41 5449.0 42 6587.5 43 7726.0 44 9359.5 45 10993.0 46 15131.5 47 19270.0 48 17761.5 49 16253.0 50 16152.0 51 16051.0 52 12788.5 53 9526.0 54 8201.5 55 6877.0 56 5826.5 57 4776.0 58 4187.0 59 3598.0 60 3298.0 61 2998.0 62 2489.5 63 1981.0 64 1605.0 65 1229.0 66 1034.0 67 839.0 68 680.0 69 521.0 70 463.0 71 405.0 72 309.5 73 214.0 74 186.5 75 105.5 76 52.0 77 31.0 78 10.0 79 11.5 80 13.0 81 7.0 82 1.0 83 9.5 84 18.0 85 9.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 127971.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.463073665127254 #Duplication Level Percentage of deduplicated Percentage of total 1 73.8629999420637 29.887240077830135 2 11.168189104111546 9.037985168514743 3 4.167551804716015 5.0589586703237455 4 1.9949402290415406 3.2288565378093472 5 1.2919796836677546 2.613873455704808 6 0.9482242521388153 2.302084065921185 7 0.7242038585581584 2.0512459854185714 8 0.5832255074255036 1.88792773362715 9 0.5252891987408509 1.912933398973205 >10 4.623317433035283 31.829867704401778 >50 0.06179872926362952 1.7503965742238474 >100 0.036692995500280025 2.788913113127193 >500 0.003862420578976845 1.1080635456470607 >1k 0.00772484115795369 4.541653968477233 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGC 1521 1.1885505309796751 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTC 1519 1.1869876768955467 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCG 1440 1.1252549405724734 No Hit GCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 1332 1.040860820029538 No Hit CCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 823 0.6431144556188512 No Hit CTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGCT 595 0.46494909002820956 Illumina Single End Adapter 2 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCT 329 0.25708949683912763 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 308 0.24067952895577902 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGGATCGTT 300 0.23442811261926527 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTC 264 0.20629673910495344 No Hit TCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 254 0.19848246868431127 No Hit GAACTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCT 254 0.19848246868431127 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGGATCGTTCGTA 243 0.1898867712216049 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCC 182 0.1422197216556876 No Hit CGCTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTG 182 0.1422197216556876 No Hit ACTGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTCTGC 169 0.1320611701088528 No Hit GAATATGTCTCTTATACACATCTGACGCAGGATCGTTCGTATGCCGTCTTC 136 0.10627407772073359 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 129 0.10080408842628409 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4860476201639434 0.0 2 0.0 0.0 0.0 2.6052777582421016 0.0 3 0.0 0.0 0.0 3.3140320853943472 0.0 4 0.0 0.0 0.0 4.3228543966992525 0.0 5 0.0 0.0 0.0 7.704089207711122 0.0 6 0.0 0.0 0.0 8.972345296981347 0.0 7 0.0 0.0 0.0 10.575052160255058 0.0 8 0.0 0.0 0.0 12.798212094927758 0.0 9 0.0 0.0 0.0 13.546819201225277 0.0 10 0.0 0.0 0.0 16.399809331801737 0.0 11 0.0 0.0 0.0 18.83708027600003 0.0 12 0.0 0.0 0.0 22.104226738870526 0.0 13 0.0 0.0 0.0 23.009900680622955 0.0 14 0.0 0.0 0.0 23.369357119972495 0.0 15 0.0 0.0 0.0 24.12812277781685 0.0 16 0.0 0.0 0.0 25.412788834970424 0.0 17 0.0 0.0 0.0 26.817013229559823 0.0 18 0.0 0.0 0.0 28.39158871931922 0.0 19 0.0 0.0 0.0 29.520750795102014 0.0 20 0.0 0.0 0.0 30.378757687288527 0.0 21 0.0 0.0 0.0 31.34850864649022 0.0 22 0.0 0.0 0.0 32.31982245977604 0.0 23 0.0 0.0 0.0 33.33645904150159 0.0 24 0.0 0.0 0.0 33.984262059372824 0.0 25 0.0 0.0 0.0 34.70864492736636 0.0 26 0.0 0.0 0.0 35.35801079932172 0.0 27 0.0 0.0 0.0 35.9722124543842 0.0 28 0.0 0.0 0.0 36.635644013096716 0.0 29 0.0 0.0 0.0 37.23109141914965 0.0 30 0.0 0.0 0.0 37.957818568269374 0.0 31 0.0 0.0 0.0 38.60015159684616 0.0 32 0.0 0.0 0.0 39.158090504880015 0.0 33 0.0 0.0 0.0 39.70352658024083 0.0 34 0.0 0.0 0.0 40.23880410405482 0.0 35 0.0 0.0 0.0 40.93427417149198 0.0 36 0.0 0.0 0.0 41.4687702682639 0.0 37 0.0 0.0 0.0 42.015769197708856 0.0 38 0.0 0.0 0.0 42.56120527306968 0.0 39 0.0 0.0 0.0 43.09413851575748 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTTAG 30 2.1503547E-6 45.000004 1 CGGAAGG 20 7.009779E-4 45.000004 2 ATTAGCG 20 7.009779E-4 45.000004 1 ATAGGGC 20 7.009779E-4 45.000004 4 CGCGGGC 30 2.1503547E-6 45.000004 4 GGATGCG 20 7.009779E-4 45.000004 1 GACACCT 20 7.009779E-4 45.000004 13 ATACTTA 20 7.009779E-4 45.000004 45 TGCATCA 20 7.009779E-4 45.000004 18 AACGGGA 20 7.009779E-4 45.000004 4 TGCGACG 20 7.009779E-4 45.000004 1 ATTGGGC 20 7.009779E-4 45.000004 4 AGTTAGG 30 2.1503547E-6 45.000004 2 ACCAATC 20 7.009779E-4 45.000004 40 GTCTTGA 20 7.009779E-4 45.000004 15 TGATGCG 20 7.009779E-4 45.000004 1 GGGATTA 30 2.1503547E-6 45.000004 7 TCAACCA 20 7.009779E-4 45.000004 37 ATGGGCG 25 3.8713355E-5 45.0 5 TTAGGGT 25 3.8713355E-5 45.0 4 >>END_MODULE