##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935827.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 406110 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09451380167935 33.0 31.0 34.0 30.0 34.0 2 32.198436384230874 33.0 31.0 34.0 30.0 34.0 3 32.12648543498067 33.0 31.0 34.0 30.0 34.0 4 35.767001551303835 37.0 35.0 37.0 35.0 37.0 5 32.14507645711753 37.0 35.0 37.0 0.0 37.0 6 33.90743148408067 37.0 35.0 37.0 17.0 37.0 7 35.53575632217872 37.0 35.0 37.0 32.0 37.0 8 35.769047794932405 37.0 35.0 37.0 35.0 37.0 9 37.72180689960848 39.0 37.0 39.0 35.0 39.0 10 37.32400827362045 39.0 37.0 39.0 34.0 39.0 11 37.319691709142845 39.0 37.0 39.0 34.0 39.0 12 37.32091797788777 39.0 37.0 39.0 34.0 39.0 13 37.306316022752455 39.0 37.0 39.0 34.0 39.0 14 38.55411341754697 40.0 38.0 41.0 34.0 41.0 15 38.67552879761641 40.0 38.0 41.0 35.0 41.0 16 38.58792937873975 40.0 38.0 41.0 34.0 41.0 17 38.568279530176554 40.0 38.0 41.0 34.0 41.0 18 38.48023195685898 40.0 38.0 41.0 34.0 41.0 19 38.31753465809756 40.0 37.0 41.0 34.0 41.0 20 38.394041023368054 40.0 37.0 41.0 34.0 41.0 21 38.325549727906235 40.0 37.0 41.0 34.0 41.0 22 38.38036738814607 40.0 37.0 41.0 34.0 41.0 23 38.37324370244515 40.0 37.0 41.0 34.0 41.0 24 38.35442121592672 40.0 37.0 41.0 34.0 41.0 25 38.10317894166605 40.0 37.0 41.0 34.0 41.0 26 38.16652138583142 40.0 37.0 41.0 34.0 41.0 27 38.139799561695106 40.0 37.0 41.0 34.0 41.0 28 38.08166752850213 40.0 37.0 41.0 34.0 41.0 29 38.07018295535692 40.0 37.0 41.0 34.0 41.0 30 37.90098249242816 40.0 37.0 41.0 33.0 41.0 31 37.88404619438083 40.0 37.0 41.0 33.0 41.0 32 37.781554258698385 40.0 37.0 41.0 33.0 41.0 33 37.667875698702325 40.0 37.0 41.0 33.0 41.0 34 37.565548742951414 40.0 37.0 41.0 33.0 41.0 35 37.521508950776884 40.0 37.0 41.0 33.0 41.0 36 37.41873384058506 40.0 36.0 41.0 33.0 41.0 37 37.3737780404324 40.0 36.0 41.0 33.0 41.0 38 37.24286769594445 40.0 36.0 41.0 32.0 41.0 39 37.16134052350348 40.0 36.0 41.0 32.0 41.0 40 37.10798059639014 40.0 36.0 41.0 32.0 41.0 41 37.006559799069215 40.0 35.0 41.0 31.0 41.0 42 36.9946467705794 40.0 35.0 41.0 32.0 41.0 43 36.9256383738396 40.0 35.0 41.0 31.0 41.0 44 36.88345275910468 40.0 35.0 41.0 31.0 41.0 45 36.842397380020195 39.0 35.0 41.0 31.0 41.0 46 36.70029548644456 39.0 35.0 41.0 31.0 41.0 47 36.62088842924331 39.0 35.0 41.0 31.0 41.0 48 36.59594444854842 39.0 35.0 41.0 31.0 41.0 49 36.5568762158036 39.0 35.0 41.0 31.0 41.0 50 36.44811750510945 39.0 35.0 41.0 31.0 41.0 51 35.430528674497054 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 11.0 9 14.0 10 11.0 11 15.0 12 10.0 13 3.0 14 13.0 15 12.0 16 35.0 17 52.0 18 97.0 19 169.0 20 342.0 21 517.0 22 811.0 23 1326.0 24 1848.0 25 2577.0 26 3358.0 27 3761.0 28 4130.0 29 4565.0 30 5465.0 31 6621.0 32 8886.0 33 12800.0 34 21038.0 35 28168.0 36 29655.0 37 46770.0 38 80778.0 39 142146.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.12619733569723 19.521804437221444 22.692127748639532 12.659870478441801 2 34.9087685602423 24.096919553815468 23.281623205535446 17.712688680406785 3 32.17256408362266 24.648740489030065 26.763192238556055 16.415503188791213 4 28.059885252764026 25.023762034916647 27.49008889217207 19.426263820147252 5 23.435029918002513 36.27662455984832 22.849966757774986 17.438378764374185 6 25.102312181428676 34.82258501391249 25.208687301470047 14.86641550318879 7 78.47799857181552 6.034818152717244 10.892369062569255 4.594814212897983 8 79.19750806431755 6.462042303809312 9.791682056585655 4.548767575287484 9 73.22203343921598 7.826697200265937 11.719731107335452 7.231538253182636 10 35.56942700253626 29.837236216788554 19.493486986284502 15.099849794390682 11 28.35783408436138 26.065844229395978 26.525079411981977 19.05124227426067 12 24.46726256432986 24.763733963704414 29.724951367856 21.044052104109724 13 24.48942404767181 25.214104552953632 31.310236142916942 18.986235256457608 14 21.231193518997316 27.80773682007338 29.829356578266975 21.131713082662333 15 20.582108295781932 26.55191943069612 32.3404988796139 20.525473393908054 16 23.006082095983846 27.07665410849277 29.181502548570588 20.735761246952798 17 22.759104676072987 26.4226441112014 29.19898549654035 21.61926571618527 18 24.44091502302332 24.597522838639776 30.00541725148359 20.956144886853316 19 22.640417620841642 27.883085863436012 27.974194183841817 21.502302331880525 20 24.85361109059122 26.318485139494225 29.18347245820098 19.644431311713575 21 23.28359311516584 28.16995395336239 29.08867055723819 19.45778237423358 22 22.91251138854005 24.317795671123587 29.562187584644555 23.207505355691808 23 20.970426731673683 28.05052818201965 29.675703627096105 21.30334145921056 24 21.351850483859053 25.975228386397774 30.691192041565092 21.981729088178078 25 20.988894634458642 28.40880549604787 28.939449902735713 21.662849966757776 26 21.163970352860062 26.523848218462977 29.452365122749995 22.859816305926966 27 22.058555563763512 26.50045554160203 29.24897195341164 22.19201694122282 28 19.796114353254044 27.388146068799095 30.5956514244909 22.22008815345596 29 21.27083795030903 25.535199822708133 29.77986259880328 23.414099628179557 30 21.709635320479673 25.23429612666519 31.265913176233042 21.790155376622096 31 22.477407598926398 25.685897909433404 29.011844081652754 22.82485040998744 32 22.84848932555219 26.041466597719833 29.158848587821034 21.951195488906947 33 21.712836423629067 25.663982664795252 29.308315481027307 23.314865430548373 34 20.459235182586 26.2369801285366 29.830095294378374 23.47368939449903 35 22.081455763216862 25.769865307429026 29.337125409371843 22.81155351998227 36 20.83918150254857 28.364482529363965 28.625249316687594 22.171086651399868 37 21.41759621777351 27.101031740168917 29.542488488340595 21.938883553716973 38 21.509935731698306 27.421388293812022 29.524759301667036 21.543916672822636 39 22.368816330550835 26.268744921326736 28.18226588855236 23.180172859570067 40 23.456945162640665 24.494102583044004 29.597645957991674 22.451306296323654 41 21.001945285760016 26.57703577848366 28.051759375538648 24.369259560217674 42 22.249144320504296 26.324641107089214 28.87321169141366 22.553002880992835 43 22.194725566964614 26.081111029031547 28.961611386077664 22.762552017926176 44 21.769225086799143 25.452709856935314 28.915318509763367 23.86274654650218 45 22.09573760803723 24.538671788431706 28.642486025953563 24.723104577577505 46 22.448843909285664 25.9158848587821 27.964344635689837 23.6709265962424 47 20.720740686021028 25.926719361749278 30.80298441309005 22.549555539139643 48 21.11398389598877 25.678018270911824 29.898549654034625 23.309448179064784 49 22.099677427298023 24.74378862869666 30.71089113786905 22.445642806136267 50 20.796828445495063 24.878481199674965 30.481396665927953 23.84329368890202 51 20.974612789638275 23.800940631848512 28.90423776809239 26.32020881042082 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 133.0 1 304.0 2 475.0 3 2078.5 4 3682.0 5 2459.0 6 1236.0 7 1185.5 8 1135.0 9 1151.0 10 1167.0 11 1166.0 12 1165.0 13 1179.0 14 1193.0 15 1181.0 16 1169.0 17 1162.0 18 1155.0 19 1210.5 20 1266.0 21 1299.5 22 1333.0 23 1538.0 24 1743.0 25 2059.0 26 2984.0 27 3593.0 28 4114.0 29 4635.0 30 5667.0 31 6699.0 32 7769.0 33 8839.0 34 9899.5 35 10960.0 36 12343.5 37 13727.0 38 14883.5 39 16040.0 40 17534.0 41 19028.0 42 21021.5 43 23015.0 44 26079.0 45 29143.0 46 33813.0 47 38483.0 48 39162.5 49 39842.0 50 39554.5 51 39267.0 52 35669.0 53 32071.0 54 28741.0 55 25411.0 56 22615.0 57 19819.0 58 17647.0 59 15475.0 60 14095.5 61 12716.0 62 11054.0 63 9392.0 64 8126.0 65 6860.0 66 5465.0 67 4070.0 68 3459.5 69 2849.0 70 2390.5 71 1932.0 72 1558.0 73 1184.0 74 1045.0 75 718.5 76 531.0 77 374.0 78 217.0 79 156.0 80 95.0 81 77.0 82 59.0 83 39.0 84 19.0 85 10.5 86 2.0 87 1.5 88 1.0 89 2.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 406110.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.40992280073165 #Duplication Level Percentage of deduplicated Percentage of total 1 71.72735244588887 28.9849677503924 2 9.578915627733023 7.741664820628269 3 4.003336408978804 4.853235456965751 4 2.476094966567838 4.002352257851462 5 1.8562820199041195 3.750610656035584 6 1.5089177947241605 3.6585150958472146 7 1.2885791362666121 3.644996839341709 8 1.1279417500581126 3.6464031234856384 9 0.9961284801398727 3.6228127483856163 >10 5.373231244145311 31.431952515225486 >50 0.036827257627171026 0.9995653583061412 >100 0.0214825669491831 1.6379974258694185 >500 0.0024551505084780684 0.6510816539835288 >1k 0.0024551505084780684 1.3738442976818155 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1970 0.48509024648494253 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC 1439 0.35433749476742754 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGC 1070 0.2634754130654256 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCG 1060 0.261013026027431 No Hit GCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 957 0.23565043953608628 No Hit CCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 573 0.1410947772770924 No Hit CGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTG 557 0.137154958016301 No Hit CTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGCT 538 0.1324764226441112 Illumina Single End Adapter 2 (95% over 21bp) TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 414 0.10194282337297776 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTT 407 0.10021915244638152 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.462387037994632E-4 0.0 0.0 0.13937110635049618 0.0 2 2.462387037994632E-4 0.0 0.0 0.6384969589520081 0.0 3 2.462387037994632E-4 0.0 0.0 0.9462953387013371 0.0 4 2.462387037994632E-4 0.0 0.0 1.3740119672010047 0.0 5 2.462387037994632E-4 0.0 0.0 2.611853931200906 0.0 6 2.462387037994632E-4 0.0 0.0 3.4842776587624043 0.0 7 2.462387037994632E-4 0.0 0.0 4.183841816256679 0.0 8 2.462387037994632E-4 0.0 0.0 5.17421388293812 0.0 9 2.462387037994632E-4 0.0 0.0 5.546526803082909 0.0 10 2.462387037994632E-4 0.0 0.0 6.646475092955111 0.0 11 2.462387037994632E-4 0.0 0.0 7.758735318017286 0.0 12 2.462387037994632E-4 0.0 0.0 8.893649503829012 0.0 13 2.462387037994632E-4 0.0 0.0 9.317180074364089 0.0 14 2.462387037994632E-4 0.0 0.0 9.489054689616113 0.0 15 2.462387037994632E-4 0.0 0.0 9.805717662702223 0.0 16 2.462387037994632E-4 0.0 0.0 10.377237694220778 0.0 17 4.924774075989264E-4 0.0 0.0 11.066459826155475 0.0 18 4.924774075989264E-4 0.0 0.0 11.745093693826796 0.0 19 4.924774075989264E-4 0.0 0.0 12.241757159390312 0.0 20 4.924774075989264E-4 0.0 0.0 12.68375563271035 0.0 21 4.924774075989264E-4 0.0 0.0 13.208490310507006 0.0 22 4.924774075989264E-4 0.0 0.0 13.828519366674055 0.0 23 7.387161113983896E-4 0.0 0.0 14.414321243012976 0.0 24 7.387161113983896E-4 0.0 0.0 14.87084779985718 0.0 25 7.387161113983896E-4 0.0 0.0 15.30348920243284 0.0 26 7.387161113983896E-4 0.0 0.0 15.69747112851198 0.0 27 7.387161113983896E-4 0.0 0.0 16.126665189234444 0.0 28 9.849548151978527E-4 0.0 0.0 16.553396862918913 0.0 29 9.849548151978527E-4 0.0 0.0 16.997119007165548 0.0 30 9.849548151978527E-4 0.0 0.0 17.538597916820567 0.0 31 9.849548151978527E-4 0.0 0.0 17.993647041441974 0.0 32 9.849548151978527E-4 0.0 0.0 18.456083327177367 0.0 33 9.849548151978527E-4 0.0 0.0 18.911132451798775 0.0 34 9.849548151978527E-4 0.0 0.0 19.342050183447835 0.0 35 0.001231193518997316 0.0 0.0 19.785526088990668 0.0 36 0.001231193518997316 0.0 0.0 20.203393169338355 0.0 37 0.001231193518997316 0.0 0.0 20.61929034005565 0.0 38 0.001231193518997316 0.0 0.0 21.058826426337692 0.0 39 0.001231193518997316 0.0 0.0 21.5138755509591 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCACGC 20 7.027892E-4 45.000004 2 TGCGACT 20 7.027892E-4 45.000004 34 TCCGTCG 20 7.027892E-4 45.000004 1 CGTAAGG 45 3.8380676E-10 45.0 2 CGTTATT 145 0.0 41.896553 1 ACGGGCG 65 0.0 41.53846 5 TACGGGA 120 0.0 41.250004 4 CGTTTTT 995 0.0 41.15578 1 TAATACG 55 6.002665E-11 40.909092 4 CGTTAGG 55 6.002665E-11 40.909092 2 CGGGTCA 50 1.0786607E-9 40.5 6 CGCACGG 45 1.9230356E-8 40.0 2 ATGGGCG 125 0.0 39.600002 5 CGGGTCT 80 0.0 39.375004 6 TACGAGG 40 3.4508594E-7 39.375004 2 ACATACG 40 3.4508594E-7 39.375004 17 TAAACGG 35 6.2383133E-6 38.57143 2 ACGGGTA 35 6.2383133E-6 38.57143 5 TGCGAAG 35 6.2383133E-6 38.57143 1 TTAACGG 35 6.2383133E-6 38.57143 2 >>END_MODULE