##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935826.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 240725 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.958782843493612 33.0 31.0 34.0 30.0 34.0 2 32.07702980579499 33.0 31.0 34.0 30.0 34.0 3 32.022631633606814 33.0 31.0 34.0 30.0 34.0 4 35.680041541177694 37.0 35.0 37.0 33.0 37.0 5 32.282691868314465 37.0 35.0 37.0 10.0 37.0 6 33.93256205213418 37.0 35.0 37.0 19.0 37.0 7 35.49466818984318 37.0 35.0 37.0 32.0 37.0 8 35.69138228268771 37.0 35.0 37.0 33.0 37.0 9 37.61253297330979 39.0 37.0 39.0 35.0 39.0 10 37.18491224426212 39.0 37.0 39.0 34.0 39.0 11 37.184442828954204 39.0 37.0 39.0 34.0 39.0 12 37.07891992938 39.0 37.0 39.0 34.0 39.0 13 36.98712638903313 39.0 37.0 39.0 33.0 39.0 14 38.12824176965417 40.0 37.0 41.0 33.0 41.0 15 38.2671305431509 40.0 37.0 41.0 34.0 41.0 16 38.26087028767265 40.0 37.0 41.0 34.0 41.0 17 38.23904455291307 40.0 37.0 41.0 34.0 41.0 18 38.19649392460276 40.0 37.0 41.0 34.0 41.0 19 38.07656869872261 40.0 37.0 41.0 34.0 41.0 20 38.08572022016824 40.0 37.0 41.0 34.0 41.0 21 38.07722089521238 40.0 37.0 41.0 34.0 41.0 22 38.141730190050886 40.0 37.0 41.0 34.0 41.0 23 38.14038425589366 40.0 37.0 41.0 34.0 41.0 24 38.09794578876311 40.0 36.0 41.0 34.0 41.0 25 37.87521030221207 40.0 36.0 41.0 34.0 41.0 26 37.91464534219545 40.0 36.0 41.0 34.0 41.0 27 37.87725412815453 40.0 36.0 41.0 34.0 41.0 28 37.8451178730917 40.0 36.0 41.0 33.0 41.0 29 37.82610447606189 40.0 36.0 41.0 33.0 41.0 30 37.66235746183404 40.0 36.0 41.0 33.0 41.0 31 37.649143213210095 40.0 36.0 41.0 33.0 41.0 32 37.55078201267006 40.0 36.0 41.0 33.0 41.0 33 37.458523211133034 40.0 36.0 41.0 33.0 41.0 34 37.40826669436078 40.0 36.0 41.0 33.0 41.0 35 37.38612524665074 40.0 36.0 41.0 33.0 41.0 36 37.3318973932911 40.0 35.0 41.0 33.0 41.0 37 37.27114342091598 40.0 35.0 41.0 33.0 41.0 38 37.10248623948489 40.0 35.0 41.0 32.0 41.0 39 37.03668916813792 40.0 35.0 41.0 32.0 41.0 40 36.98730917021498 39.0 35.0 41.0 32.0 41.0 41 36.89235019212795 39.0 35.0 41.0 31.0 41.0 42 36.90024717000727 39.0 35.0 41.0 31.0 41.0 43 36.82293488420397 39.0 35.0 41.0 31.0 41.0 44 36.768694568491014 39.0 35.0 41.0 31.0 41.0 45 36.72451137189739 39.0 35.0 41.0 31.0 41.0 46 36.59029598089106 39.0 35.0 41.0 31.0 41.0 47 36.45394121923356 39.0 35.0 41.0 31.0 41.0 48 36.415727489874335 39.0 35.0 41.0 31.0 41.0 49 36.32008308235538 39.0 35.0 40.0 31.0 41.0 50 36.18325059715443 38.0 35.0 40.0 31.0 41.0 51 35.071579603281755 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 6.0 9 7.0 10 15.0 11 7.0 12 4.0 13 6.0 14 8.0 15 5.0 16 19.0 17 21.0 18 49.0 19 95.0 20 226.0 21 402.0 22 623.0 23 817.0 24 1009.0 25 1421.0 26 1777.0 27 2001.0 28 2324.0 29 2654.0 30 3400.0 31 4438.0 32 5979.0 33 8868.0 34 14936.0 35 20543.0 36 18254.0 37 28157.0 38 47437.0 39 75166.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.01921279468273 21.02357461834043 24.839547201163153 11.117665385813687 2 34.73424031571295 26.302212067712123 22.54522795721259 16.418319659362343 3 30.5871845466819 26.32381348011216 25.79748675874961 17.29151521445633 4 28.56745248727802 25.050160972063555 27.67764046110707 18.704746079551356 5 24.359746598816077 35.82012670059196 22.171357357981098 17.648769342610862 6 24.802990964793853 35.75739952227646 24.926783674317164 14.512825838612525 7 77.66746287257243 5.579810987641499 12.130023886177172 4.62270225360889 8 77.38124415827188 7.381867275937274 9.389552393810364 5.8473361719804755 9 71.77401599335342 6.869664554990133 11.389760099698828 9.966559351957628 10 40.59279260567037 22.521964897704848 20.774327552186104 16.110914944438676 11 32.20895212379271 24.3236057742237 23.851282583861252 19.616159518122338 12 26.558105722297228 21.583134281856893 30.520303250597152 21.338456745248727 13 24.504309897185585 25.105826150171357 32.09263682625402 18.297227126389032 14 20.58531519368574 29.93332640980372 29.664139578357045 19.817218818153496 15 18.911621144459446 25.14362862187143 36.046526119015475 19.89822411465365 16 21.441063454148924 24.50264825007789 31.72624363900717 22.330044656766017 17 21.215079447502337 24.8873195555094 29.293592273340952 24.604008723647315 18 22.11693841520407 25.450617925018175 30.884203967182472 21.548239692595285 19 22.341676186519887 27.00508879426732 28.120469415307923 22.53276560390487 20 23.576279987537646 26.796136670474606 29.49091286737979 20.136670474607953 21 22.364939246027625 28.64804237200125 29.512929691556756 19.474088690414373 22 21.392875688025757 24.315712950462146 28.8212690829785 25.470142278533597 23 19.821372935922735 27.256828331083188 29.341780039464123 23.58001869352996 24 21.93249558624987 25.131581680340638 29.94661958666528 22.989303146744213 25 20.04486447190778 28.42538165957005 27.994184235123065 23.535569633399106 26 20.051926472115483 26.845986083705476 29.554886281026064 23.547201163152977 27 21.68491016720324 27.35818880465261 27.700903520614812 23.25599750752934 28 19.598296811714615 26.132308650950254 30.609201370858862 23.66019316647627 29 22.290580537958252 25.038529442309688 29.08007062000208 23.59081939972998 30 21.22712638903313 28.55208225153183 27.22359538892928 22.997195970505764 31 24.79634437636307 26.541489251220273 25.72354346245716 22.9386229099595 32 23.581264928860733 28.67130543150898 25.282791567140926 22.464638072489354 33 22.49828642642019 28.252154948592796 24.80672967078617 24.442828954200852 34 22.786997611382283 25.93249558624987 28.060234707653965 23.220272094713884 35 20.574099075708794 26.88171149652093 26.425589365458514 26.118600062311764 36 23.93685740990757 28.155364004569527 25.8564752310728 22.0513033544501 37 21.29899262644096 26.94236161595181 28.833731436286218 22.924914321321012 38 20.490185896770175 30.19337418215806 25.20054003531 24.11589988576176 39 21.227541800810055 29.217156506386953 27.860837054730503 21.69446463807249 40 21.58479592896459 26.09616782635788 28.61023990030117 23.708796344376363 41 20.039464118807768 26.313012773912142 27.10686467961367 26.540658427666425 42 21.784193581888047 25.60847440024925 27.47741198462976 25.129920033232946 43 23.05909232526742 26.176342299304185 26.348322774950674 24.416242600477723 44 22.331706303873712 25.43317063038737 27.03333679509814 25.201786270640774 45 21.679925225880154 25.613874753349258 26.580953370028038 26.12524665074255 46 24.14165541593104 25.93872676290373 27.23564233046007 22.683975490705162 47 20.00540035310001 25.34593415723336 30.905805379582514 23.74286011008412 48 21.181846505348425 24.787620729047667 28.756880257555302 25.273652508048606 49 21.389552393810366 23.60120469415308 31.358604216429537 23.65063869560702 50 21.745144874857203 24.09762176757711 29.9034167618652 24.25381659570049 51 20.49184754387787 24.03198670682314 26.778689375843808 28.69747637345519 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 124.0 1 210.5 2 297.0 3 680.5 4 1064.0 5 750.5 6 437.0 7 425.5 8 414.0 9 446.0 10 478.0 11 479.5 12 481.0 13 533.5 14 586.0 15 535.0 16 484.0 17 480.5 18 477.0 19 517.5 20 558.0 21 587.5 22 617.0 23 757.0 24 897.0 25 1110.0 26 1568.5 27 1814.0 28 2057.5 29 2301.0 30 2768.5 31 3236.0 32 3754.0 33 4272.0 34 4644.0 35 5016.0 36 5409.0 37 5802.0 38 6704.5 39 7607.0 40 9287.5 41 10968.0 42 12514.0 43 14060.0 44 16355.5 45 18651.0 46 23426.0 47 28201.0 48 27552.5 49 26904.0 50 26908.5 51 26913.0 52 23758.0 53 20603.0 54 17585.0 55 14567.0 56 12939.0 57 11311.0 58 9923.5 59 8536.0 60 7868.0 61 7200.0 62 6105.0 63 5010.0 64 4309.0 65 3608.0 66 2947.0 67 2286.0 68 1872.5 69 1459.0 70 1189.0 71 919.0 72 749.5 73 580.0 74 436.0 75 238.0 76 184.0 77 153.5 78 123.0 79 80.0 80 37.0 81 25.0 82 13.0 83 11.5 84 10.0 85 5.5 86 1.0 87 0.5 88 0.0 89 1.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 240725.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.310728009139055 #Duplication Level Percentage of deduplicated Percentage of total 1 73.20946433356005 29.511268044449064 2 10.518559739483502 8.480216014124 3 3.960304210721573 4.789282376155364 4 2.1908942888353016 3.5326617509606395 5 1.369566561553206 2.7604112576591544 6 1.0449514623137328 2.5273652508048605 7 0.8862507471299904 2.5007788970817324 8 0.7450689420639337 2.4027417177276975 9 0.663657536222923 2.407726659050784 >10 5.331931820523918 34.92325267421331 >50 0.048434633854778544 1.3347180392564129 >100 0.02473257898967415 1.8506594661958666 >500 0.0020610482491395126 0.5213417800394641 >1k 0.004122096498279025 2.457576072281649 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGC 1725 0.7165853151936857 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCG 1585 0.6584276664243431 No Hit GAATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTC 1550 0.6438882542320075 No Hit GCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 1056 0.43867483643161287 No Hit CCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 718 0.29826565583134285 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 537 0.2230761242081213 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCT 344 0.14290165126181328 No Hit TCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCTGC 323 0.13417800394641188 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCGAATCAT 293 0.1217156506386956 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTC 284 0.11797694464638073 No Hit GAACTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTTCT 271 0.11257659154637034 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCGAATCATCGTA 262 0.10883788555405545 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCC 252 0.10468376778481671 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.154117769238758E-4 0.0 0.0 0.10676082666943608 0.0 2 4.154117769238758E-4 0.0 0.0 1.120365562363693 0.0 3 4.154117769238758E-4 0.0 0.0 1.5457472219337418 0.0 4 4.154117769238758E-4 0.0 0.0 2.1996053588119224 0.0 5 4.154117769238758E-4 0.0 0.0 4.344376363069893 0.0 6 4.154117769238758E-4 0.0 0.0 5.284868626025548 0.0 7 4.154117769238758E-4 0.0 0.0 6.250285595596635 0.0 8 4.154117769238758E-4 0.0 0.0 7.654377401599335 0.0 9 4.154117769238758E-4 0.0 0.0 8.131685533284868 0.0 10 4.154117769238758E-4 0.0 0.0 9.883892408349777 0.0 11 4.154117769238758E-4 0.0 0.0 11.668085990237824 0.0 12 8.308235538477516E-4 0.0 0.0 13.673278637449371 0.0 13 8.308235538477516E-4 0.0 0.0 14.260255478242808 0.0 14 8.308235538477516E-4 0.0 0.0 14.489978190881711 0.0 15 8.308235538477516E-4 0.0 0.0 15.031675147990445 0.0 16 8.308235538477516E-4 0.0 0.0 16.031986706823137 0.0 17 8.308235538477516E-4 0.0 0.0 17.108734032609824 0.0 18 8.308235538477516E-4 0.0 0.0 18.217883476996573 0.0 19 0.0012462353307716274 0.0 0.0 19.046629971959707 0.0 20 0.0012462353307716274 0.0 0.0 19.723751168345622 0.0 21 0.0012462353307716274 0.0 0.0 20.51884930937792 0.0 22 0.0012462353307716274 0.0 0.0 21.39993768823346 0.0 23 0.0012462353307716274 0.0 0.0 22.30968947969675 0.0 24 0.0016616471076955032 0.0 0.0 22.97019420500571 0.0 25 0.0016616471076955032 0.0 0.0 23.597465988160764 0.0 26 0.0016616471076955032 0.0 0.0 24.17655000519265 0.0 27 0.0016616471076955032 0.0 0.0 24.702876726555196 0.0 28 0.0016616471076955032 0.0 0.0 25.294007685117872 0.0 29 0.0016616471076955032 0.0 0.0 25.879738290580537 0.0 30 0.0016616471076955032 0.0 0.0 26.52196489770485 0.0 31 0.0016616471076955032 0.0 0.0 27.124727386021394 0.0 32 0.0016616471076955032 0.0 0.0 27.718766227022535 0.0 33 0.0016616471076955032 0.0 0.0 28.264617301900508 0.0 34 0.0016616471076955032 0.0 0.0 28.819192024093883 0.0 35 0.0016616471076955032 0.0 0.0 29.40284557067193 0.0 36 0.002077058884619379 0.0 0.0 29.96697476373455 0.0 37 0.002077058884619379 0.0 0.0 30.5227957212587 0.0 38 0.002077058884619379 0.0 0.0 31.11808079759061 0.0 39 0.002077058884619379 0.0 0.0 31.699241873507113 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATG 20 7.0221646E-4 45.0 6 TAATACG 40 6.7757355E-9 45.0 4 GACCGAA 20 7.0221646E-4 45.0 31 AGTGCGG 25 3.8815895E-5 45.0 2 TGACCGA 20 7.0221646E-4 45.0 30 CCTCCGC 25 3.8815895E-5 45.0 45 TTAAGCG 25 3.8815895E-5 45.0 1 CAAGCGA 35 1.2065902E-7 45.0 15 CCGACAA 20 7.0221646E-4 45.0 12 TTCGCAG 20 7.0221646E-4 45.0 1 TAACGGG 60 0.0 44.999996 3 GACGGGA 100 0.0 42.75 4 ACGGGAC 60 3.6379788E-12 41.249996 5 TAGTAGG 55 6.002665E-11 40.909092 2 AGTAAGG 105 0.0 40.714287 2 ACGGGAT 50 1.0732037E-9 40.5 5 TATTAGG 50 1.0732037E-9 40.5 2 CGTTTTT 380 0.0 40.263157 1 CTTGAGG 45 1.9173967E-8 40.0 2 GTACAGG 40 3.443056E-7 39.375 2 >>END_MODULE