##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935824.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 276885 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.998757606948733 33.0 31.0 34.0 30.0 34.0 2 32.103255864348014 33.0 31.0 34.0 30.0 34.0 3 32.04833053433736 33.0 31.0 34.0 30.0 34.0 4 35.70131281940156 37.0 35.0 37.0 33.0 37.0 5 32.02778048648356 37.0 35.0 37.0 0.0 37.0 6 33.83117178612059 37.0 35.0 37.0 17.0 37.0 7 35.48942340682955 37.0 35.0 37.0 32.0 37.0 8 35.725571988370625 37.0 35.0 37.0 35.0 37.0 9 37.70381566354263 39.0 37.0 39.0 35.0 39.0 10 37.16798670928364 39.0 37.0 39.0 34.0 39.0 11 37.19029561009083 39.0 37.0 39.0 34.0 39.0 12 37.09012767033245 39.0 37.0 39.0 34.0 39.0 13 36.99865287032522 39.0 37.0 39.0 33.0 39.0 14 38.16526716868014 40.0 37.0 41.0 33.0 41.0 15 38.318778554273436 40.0 37.0 41.0 34.0 41.0 16 38.28981346046192 40.0 37.0 41.0 34.0 41.0 17 38.300048756704044 40.0 37.0 41.0 34.0 41.0 18 38.25813243765462 40.0 37.0 41.0 34.0 41.0 19 38.148538201780525 40.0 37.0 41.0 34.0 41.0 20 38.20489734005093 40.0 37.0 41.0 34.0 41.0 21 38.189143507232245 40.0 37.0 41.0 34.0 41.0 22 38.2472940029254 40.0 37.0 41.0 34.0 41.0 23 38.26976542607942 40.0 37.0 41.0 34.0 41.0 24 38.22159741408888 40.0 37.0 41.0 34.0 41.0 25 37.999346299005005 40.0 36.0 41.0 34.0 41.0 26 38.03296675515106 40.0 36.0 41.0 34.0 41.0 27 38.03814218899543 40.0 36.0 41.0 34.0 41.0 28 37.99465482059339 40.0 36.0 41.0 34.0 41.0 29 37.96676598587862 40.0 36.0 41.0 34.0 41.0 30 37.851721833974395 40.0 36.0 41.0 34.0 41.0 31 37.86458999223505 40.0 36.0 41.0 34.0 41.0 32 37.81460172996009 40.0 36.0 41.0 34.0 41.0 33 37.76773750835184 40.0 36.0 41.0 33.0 41.0 34 37.70513751196345 40.0 36.0 41.0 33.0 41.0 35 37.744374018094156 40.0 36.0 41.0 33.0 41.0 36 37.66916228759232 40.0 36.0 41.0 33.0 41.0 37 37.637268179930295 40.0 36.0 41.0 33.0 41.0 38 37.51983675533164 40.0 36.0 41.0 33.0 41.0 39 37.4610433934666 40.0 36.0 41.0 33.0 41.0 40 37.38967080195749 40.0 35.0 41.0 33.0 41.0 41 37.32871769868357 40.0 35.0 41.0 33.0 41.0 42 37.35337775610813 40.0 35.0 41.0 33.0 41.0 43 37.31212597287683 40.0 35.0 41.0 33.0 41.0 44 37.282283258392475 40.0 35.0 41.0 33.0 41.0 45 37.27054914495188 40.0 35.0 41.0 33.0 41.0 46 37.159221337378334 39.0 35.0 41.0 32.0 41.0 47 37.07659497625368 39.0 35.0 41.0 32.0 41.0 48 37.07500948047023 39.0 35.0 41.0 32.0 41.0 49 37.05297867345649 39.0 35.0 41.0 32.0 41.0 50 36.92496523827582 39.0 35.0 41.0 32.0 41.0 51 35.91227404879282 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 10.0 11 12.0 12 4.0 13 4.0 14 2.0 15 5.0 16 13.0 17 28.0 18 43.0 19 108.0 20 204.0 21 327.0 22 544.0 23 773.0 24 1054.0 25 1302.0 26 1630.0 27 1848.0 28 2156.0 29 2585.0 30 3399.0 31 4713.0 32 6348.0 33 9797.0 34 17091.0 35 23260.0 36 19681.0 37 30811.0 38 53081.0 39 95979.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.23105260306626 19.931379453563753 24.01213500189609 10.825432941473897 2 32.57092294634957 25.438358885457863 24.14395868320783 17.84675948498474 3 31.70233129277498 26.286364375101577 25.407299059176193 16.604005272947255 4 27.113061379272985 25.968542896870545 27.70572620401972 19.212669519836755 5 23.553460823085395 36.893295050291634 21.757408310309334 17.795835816313634 6 23.849973815844123 36.927966484280475 24.467919894541055 14.754139805334345 7 79.15091102804413 5.960597359914766 10.16739801722737 4.721093594813731 8 79.79197139606697 6.624410856492768 8.194015566029218 5.389602181411055 9 75.50029795763584 5.886920562688481 10.009209599653285 8.603571880022393 10 39.92993481048089 23.075645123426693 20.445311230294166 16.549108835798258 11 31.887606768152843 25.530454881990718 22.77263123679506 19.80930711306138 12 28.590208931505863 21.92065297867346 28.227964678476624 21.26117341134406 13 24.938512378785415 25.113314191812485 29.813460461924624 20.134712967477473 14 20.212001372410928 29.43785326037886 28.14164725427524 22.208498112934976 15 19.940047312060962 24.948624880365493 34.68299113350308 20.42833667407046 16 20.818390306444915 24.467558733770336 31.923361684453834 22.790689275330912 17 21.168716254040486 24.781407443523484 28.879137548079527 25.170738754356503 18 21.47678639146216 25.25019412391426 30.331365007132927 22.941654477490655 19 22.375715549776984 27.515755638622537 27.7180056702241 22.390523141376384 20 23.760767105477004 26.988822074146306 29.03335319717572 20.21705762320097 21 22.355490546616828 28.328367372735975 28.663524567961428 20.652617512685772 22 20.441699622586995 26.507394766780436 27.144482366325366 25.906423244307202 23 19.89598569803348 28.381458006031384 28.019574913772864 23.70298138216227 24 21.88706502699677 25.829134839373747 29.103418386694834 23.180381746934646 25 19.76705130288748 28.359427199017645 27.531646712534087 24.341874785560794 26 19.061704317677012 29.25510591039601 28.535312494356862 23.14787727757011 27 20.95490907777597 28.431298192390344 27.322895787059608 23.290896942774076 28 18.212615345721147 27.771818625060945 31.058020477815703 22.957545551402205 29 20.66020188887083 26.824493923470033 28.916698268234104 23.59860591942503 30 20.50562507900392 28.079166440941183 27.82201997219062 23.593188507864276 31 21.316069848493058 27.495891796233092 27.965039637394582 23.222998717879264 32 24.047889918197086 28.53711829821045 25.384545930621016 22.03044585297145 33 21.675785976127273 26.89166982682341 26.684363544431804 24.748180652617513 34 20.282066561930044 26.097838452787258 30.593928887444243 23.026166097838452 35 21.57935605034581 26.065333983422722 26.17043176770139 26.184878198530075 36 20.526211242934792 27.48614045542373 27.928923560322875 24.0587247413186 37 20.68151037434314 25.95156834064684 29.97309352258158 23.393827762428447 38 21.208805099590084 28.348592375896132 26.611047907976236 23.831554616537552 39 22.214637846037164 26.271917944272893 27.959261065063114 23.55418314462683 40 22.555934774364808 25.624717843147877 29.456994781226864 22.36235260126045 41 19.73454683352294 25.288838326380986 28.159705292811093 26.816909547284972 42 21.51109666468028 24.942485147263305 28.63210358090904 24.91431460714737 43 22.412192787619407 25.055889629268467 27.132564060891706 25.399353522220412 44 21.08637159831699 25.86958484569406 27.75376058652509 25.290282969463856 45 21.424418079708182 25.422106650775593 26.914061794607868 26.239413474908357 46 23.403940264008526 26.3354822399191 27.452191342976327 22.80838615309605 47 19.283095870126587 25.727648662802245 30.95220037199559 24.037055095075573 48 21.093594813731332 24.055113133611428 29.208877331744226 25.642414720913013 49 21.49195514383228 22.40713653682937 31.214764252306914 24.886144067031438 50 20.580385358542355 23.5260126045109 29.793235458764467 26.10036657818228 51 19.6258374415371 23.72790147534175 28.00043339292486 28.645827690196292 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 84.0 1 166.0 2 248.0 3 520.0 4 792.0 5 534.0 6 276.0 7 300.5 8 325.0 9 343.0 10 361.0 11 370.5 12 380.0 13 389.5 14 399.0 15 388.5 16 378.0 17 406.5 18 435.0 19 419.5 20 404.0 21 539.0 22 674.0 23 691.5 24 709.0 25 992.5 26 1465.5 27 1655.0 28 2146.5 29 2638.0 30 3008.5 31 3379.0 32 4031.5 33 4684.0 34 5627.5 35 6571.0 36 7414.5 37 8258.0 38 8920.0 39 9582.0 40 11114.5 41 12647.0 42 15063.0 43 17479.0 44 20038.5 45 22598.0 46 27439.0 47 32280.0 48 31975.5 49 31671.0 50 31444.5 51 31218.0 52 27247.5 53 23277.0 54 19827.0 55 16377.0 56 14527.0 57 12677.0 58 11463.5 59 10250.0 60 9058.5 61 7867.0 62 7011.0 63 6155.0 64 4970.0 65 3785.0 66 3008.0 67 2231.0 68 1718.5 69 1206.0 70 942.5 71 679.0 72 544.5 73 410.0 74 349.0 75 224.5 76 161.0 77 121.5 78 82.0 79 53.5 80 25.0 81 18.0 82 11.0 83 6.0 84 1.0 85 1.0 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 276885.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.69380960240331 #Duplication Level Percentage of deduplicated Percentage of total 1 71.1822293391491 26.119471704453446 2 11.477281450616788 8.422903606042553 3 4.347171764356599 4.785428790907341 4 2.1772325022903556 3.1956381959682583 5 1.406491541113578 2.5804766408506223 6 1.017631608754934 2.240446829822455 7 0.8636873139166196 2.218438449700731 8 0.6797539034238762 1.995420824698093 9 0.5937850273518049 1.9609411264564476 >10 6.1667673968265095 40.774076995100074 >50 0.05697937131125013 1.3997290195510947 >100 0.02499095232949567 1.693173258450695 >500 0.0019992761863596538 0.5410378154711385 >1k 0.0039985523727193075 2.072816742527053 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGC 1512 0.5460750853242321 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCG 1445 0.5218773136861874 No Hit GCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCTGC 1350 0.48756704046806437 Illumina Single End Adapter 1 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTC 1344 0.4854000758437618 No Hit CCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCTGC 918 0.3315455875182838 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCTGCT 557 0.20116654928941619 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 378 0.13651877133105803 No Hit TCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCTGC 375 0.13543528901890678 Illumina Single End Adapter 1 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCT 306 0.11051519583942793 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.223215414341695E-4 0.0 0.0 0.20947324701590914 0.0 2 7.223215414341695E-4 0.0 0.0 1.3016234176643733 0.0 3 7.223215414341695E-4 0.0 0.0 1.7194864293840404 0.0 4 7.223215414341695E-4 0.0 0.0 2.3247918811058743 0.0 5 7.223215414341695E-4 0.0 0.0 4.175379670260217 0.0 6 7.223215414341695E-4 0.0 0.0 5.072864185492172 0.0 7 7.223215414341695E-4 0.0 0.0 6.0061036170251185 0.0 8 7.223215414341695E-4 0.0 0.0 7.419686873611789 0.0 9 0.001083482312151254 0.0 0.0 7.8418838145800605 0.0 10 0.001083482312151254 0.0 0.0 9.50575148527367 0.0 11 0.001083482312151254 0.0 0.0 11.232461130072052 0.0 12 0.001083482312151254 0.0 0.0 13.089549813099302 0.0 13 0.001083482312151254 0.0 0.0 13.652599454647236 0.0 14 0.001083482312151254 0.0 0.0 13.90252270798346 0.0 15 0.001083482312151254 0.0 0.0 14.385755819202918 0.0 16 0.001083482312151254 0.0 0.0 15.381114903299204 0.0 17 0.001083482312151254 0.0 0.0 16.419452119110822 0.0 18 0.001083482312151254 0.0 0.0 17.522437112880798 0.0 19 0.0018058038535854236 0.0 0.0 18.278346605991658 0.0 20 0.0018058038535854236 0.0 0.0 18.928797154053125 0.0 21 0.0018058038535854236 0.0 0.0 19.75332719360023 0.0 22 0.0018058038535854236 0.0 0.0 20.651895191144337 0.0 23 0.0018058038535854236 0.0 0.0 21.537822561713348 0.0 24 0.0018058038535854236 0.0 0.0 22.262672228542534 0.0 25 0.0018058038535854236 0.0 0.0 22.904454918106794 0.0 26 0.0018058038535854236 0.0 0.0 23.497842064394966 0.0 27 0.0018058038535854236 0.0 0.0 24.06450331365007 0.0 28 0.0018058038535854236 0.0 0.0 24.63080340213446 0.0 29 0.0018058038535854236 0.0 0.0 25.189157953663074 0.0 30 0.0018058038535854236 0.0 0.0 25.829134839373747 0.0 31 0.0018058038535854236 0.0 0.0 26.41963269949618 0.0 32 0.0018058038535854236 0.0 0.0 26.97365332177619 0.0 33 0.0018058038535854236 0.0 0.0 27.55439984108926 0.0 34 0.0018058038535854236 0.0 0.0 28.078082958629032 0.0 35 0.0018058038535854236 0.0 0.0 28.693139751160228 0.0 36 0.0018058038535854236 0.0 0.0 29.250049659605974 0.0 37 0.0018058038535854236 0.0 0.0 29.79431894107662 0.0 38 0.0018058038535854236 0.0 0.0 30.331003846362208 0.0 39 0.0018058038535854236 0.0 0.0 30.85468696390198 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGG 35 1.2074634E-7 45.000004 2 AGTCCGG 20 7.023999E-4 45.000004 2 CGAACTT 20 7.023999E-4 45.000004 10 GCAAGCG 20 7.023999E-4 45.000004 1 TTGTGCG 20 7.023999E-4 45.000004 1 GCGAACT 20 7.023999E-4 45.000004 9 TCGGGCC 20 7.023999E-4 45.000004 5 GCCGGAC 20 7.023999E-4 45.000004 38 TTCGTAC 20 7.023999E-4 45.000004 33 ACTTACG 20 7.023999E-4 45.000004 1 CGCTCGA 20 7.023999E-4 45.000004 41 CGCTCAA 20 7.023999E-4 45.000004 14 TTTGGCG 20 7.023999E-4 45.000004 1 GTTCCCG 20 7.023999E-4 45.000004 17 TTAACGG 20 7.023999E-4 45.000004 2 TCCCGCT 20 7.023999E-4 45.000004 18 CTCGAGG 20 7.023999E-4 45.000004 2 GGCGACT 35 1.2074634E-7 45.000004 10 TTCGCAG 20 7.023999E-4 45.000004 1 GCGTCAT 40 6.7830115E-9 45.000004 37 >>END_MODULE