##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935823.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 337826 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.829992362932398 33.0 31.0 34.0 30.0 34.0 2 31.933974886480023 33.0 31.0 34.0 30.0 34.0 3 31.883792248080372 33.0 31.0 34.0 30.0 34.0 4 35.58422383120305 37.0 35.0 37.0 33.0 37.0 5 31.76352027375039 37.0 35.0 37.0 0.0 37.0 6 33.62999591505687 37.0 35.0 37.0 17.0 37.0 7 35.3382007305536 37.0 35.0 37.0 32.0 37.0 8 35.56300876782723 37.0 35.0 37.0 33.0 37.0 9 37.50778507278895 39.0 37.0 39.0 35.0 39.0 10 37.01158288586432 39.0 37.0 39.0 33.0 39.0 11 37.03919473338346 39.0 37.0 39.0 33.0 39.0 12 37.040668865037034 39.0 37.0 39.0 33.0 39.0 13 36.95719690017938 39.0 37.0 39.0 33.0 39.0 14 38.14657249590026 40.0 37.0 41.0 33.0 41.0 15 38.22082077756004 40.0 37.0 41.0 33.0 41.0 16 38.272296981286225 40.0 37.0 41.0 34.0 41.0 17 38.16947777850136 40.0 37.0 41.0 33.0 41.0 18 38.116438640009946 40.0 37.0 41.0 34.0 41.0 19 37.9736698773925 40.0 37.0 41.0 34.0 41.0 20 37.87194887308851 40.0 36.0 41.0 33.0 41.0 21 37.9795131221398 40.0 37.0 41.0 33.0 41.0 22 38.0689704167234 40.0 37.0 41.0 34.0 41.0 23 37.99783024397175 40.0 37.0 41.0 34.0 41.0 24 37.9955124827574 40.0 36.0 41.0 33.0 41.0 25 37.852924286467 40.0 36.0 41.0 33.0 41.0 26 37.82614422809375 40.0 36.0 41.0 33.0 41.0 27 37.74775772143056 40.0 36.0 41.0 33.0 41.0 28 37.70016517378769 40.0 36.0 41.0 33.0 41.0 29 37.67998022650713 40.0 36.0 41.0 33.0 41.0 30 37.551482123933624 40.0 36.0 41.0 33.0 41.0 31 37.53549164362719 40.0 36.0 41.0 33.0 41.0 32 37.31959055845317 40.0 36.0 41.0 32.0 41.0 33 37.244625931692646 40.0 36.0 41.0 32.0 41.0 34 37.09240555789075 40.0 36.0 41.0 31.0 41.0 35 36.99517503093308 40.0 36.0 41.0 31.0 41.0 36 36.92352276023752 40.0 36.0 41.0 31.0 41.0 37 36.798473178500174 40.0 36.0 41.0 31.0 41.0 38 36.7285792094155 40.0 35.0 41.0 30.0 41.0 39 36.67568215590274 40.0 35.0 41.0 30.0 41.0 40 36.65105705303914 40.0 35.0 41.0 30.0 41.0 41 36.6355757105729 40.0 35.0 41.0 30.0 41.0 42 36.6003919177328 40.0 35.0 41.0 30.0 41.0 43 36.554599113152925 40.0 35.0 41.0 30.0 41.0 44 36.59301829936121 40.0 35.0 41.0 30.0 41.0 45 36.64363903311172 39.0 35.0 41.0 30.0 41.0 46 36.54398418120571 39.0 35.0 41.0 30.0 41.0 47 36.35769893377064 39.0 35.0 41.0 30.0 41.0 48 36.40549276846661 39.0 35.0 41.0 30.0 41.0 49 36.422430481964085 39.0 35.0 41.0 30.0 41.0 50 36.27970020069503 39.0 35.0 41.0 30.0 41.0 51 35.36462261637648 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 16.0 11 3.0 12 5.0 13 2.0 14 5.0 15 9.0 16 18.0 17 30.0 18 81.0 19 206.0 20 507.0 21 949.0 22 1484.0 23 2053.0 24 2457.0 25 2983.0 26 3233.0 27 3450.0 28 3459.0 29 3841.0 30 4708.0 31 6220.0 32 8286.0 33 12064.0 34 18714.0 35 25295.0 36 25117.0 37 38606.0 38 64886.0 39 109066.0 40 66.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.84097730784487 19.854895715545872 23.291576136827835 10.012550839781426 2 31.49875971654047 29.513714160544186 23.456157903772947 15.531368219142399 3 27.46709844712959 30.057189203909708 26.783314487339638 15.692397861621071 4 25.23133210587699 23.24983867434715 34.420974110932846 17.097855108843014 5 26.13001959588664 34.67110287544475 22.919195088595902 16.2796824400727 6 21.88759894146691 38.59383232788477 25.56937595093332 13.949192779715 7 75.1626576995258 4.4043383280150135 16.197687566972345 4.235316405486849 8 75.19581086121258 9.801199434028169 10.024391254669563 4.978598450089692 9 70.58574532451617 5.406037427551461 11.248986164475202 12.759231083457165 10 37.57259654378289 25.382297395700746 21.325771255024776 15.719334805491583 11 29.027665129386133 24.704137632982658 26.872413609372874 19.395783628258336 12 23.23000597940952 20.760391444116202 32.419351974093175 23.590250602381108 13 23.907277711010995 24.18049528455477 35.687306483219174 16.224920521215065 14 20.613866309875498 30.50475688668131 29.48411312332384 19.39726368011935 15 17.473788281541385 25.685708027209277 37.34289249495302 19.49761119629632 16 19.763428510535007 25.592760770337392 30.01781982440665 24.62599089472095 17 20.336800601493078 26.874189671606093 30.648025906827776 22.140983820073053 18 20.24740546908764 25.516686104681106 31.807498534748657 22.4284098914826 19 19.75070006453026 28.305399821209736 29.135412904868186 22.808487209391817 20 21.913055833476406 27.451113887030605 32.1893519148911 18.446478364601894 21 19.89574514690995 31.338914115550608 30.33691900564196 18.428421731897483 22 18.03235985388928 24.34537306187209 31.718103402343218 25.904163681895415 23 18.98936138722301 28.411371534458567 30.2199949086216 22.379272169696826 24 19.80398193152688 26.83955645805829 30.076133867730725 23.280327742684104 25 17.66234688863498 32.33469300764299 28.24649375714125 21.756466346580783 26 17.117095783036238 27.252490927282093 31.800098275443574 23.8303150142381 27 21.723313184894 28.415219669297215 28.186995672328358 21.67447147348043 28 17.342063665910853 27.27824382966379 32.29413958665111 23.085552917774237 29 19.630519853415667 24.686673021022656 29.948257386938838 25.734549738622842 30 19.71725089247127 30.931307833026466 28.489518272720275 20.86192300178198 31 22.413609372872425 26.832452209125407 25.069118421909504 25.68481999609266 32 22.67913067673891 31.812530711076114 24.57330104846874 20.935037563716232 33 23.583442363820428 26.278616802732767 26.00687928105001 24.131061552396798 34 20.265166091419843 25.747278184627586 26.39702095161414 27.590534772338422 35 19.009490092532843 30.002131274679865 26.14689218710224 24.841486445685057 36 21.74225784871502 27.80780638553575 27.311989012094983 23.137946753654248 37 18.434637949713757 31.508232048450978 28.844138698619997 21.212991303215265 38 22.479027665129387 28.242645622302604 25.857394043087268 23.420932669480738 39 20.760095433744 27.887433175658476 27.818166748562867 23.534304642034655 40 21.263017056117647 26.42839805106771 27.80810239590795 24.50048249690669 41 17.42021040417256 26.98963371676544 28.129865670493093 27.46029020856891 42 19.21995346716949 27.9495953538212 30.030548270411394 22.799902908597915 43 21.261240993884424 25.64604263733401 28.82667408666 24.266042282121568 44 20.73375051061789 25.698732483586223 28.21541266805989 25.35210433773599 45 20.311047699111377 24.491010164996183 27.153031442221735 28.044910693670705 46 24.2690023858436 28.254486037190745 25.498037451232292 21.978474125733367 47 18.186877268179476 26.30200162213684 32.43711259642538 23.074008513258303 48 20.01829344100217 26.36978799737143 27.943675146377128 25.668243415249272 49 19.83003084428078 23.344561993452253 33.26978977343366 23.555617388833305 50 21.042489328826083 23.283583856778343 30.21969889824939 25.454227916146184 51 19.672849336640756 23.38422738332751 26.992001799743065 29.950921480288667 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 172.0 2 263.0 3 1366.5 4 2470.0 5 1716.5 6 963.0 7 970.0 8 977.0 9 970.5 10 964.0 11 958.5 12 953.0 13 943.5 14 934.0 15 864.5 16 795.0 17 806.5 18 818.0 19 819.0 20 820.0 21 904.0 22 988.0 23 1130.5 24 1273.0 25 1536.5 26 2203.5 27 2607.0 28 2950.0 29 3293.0 30 3958.0 31 4623.0 32 5573.0 33 6523.0 34 7732.0 35 8941.0 36 9849.0 37 10757.0 38 11792.0 39 12827.0 40 14474.0 41 16121.0 42 18325.5 43 20530.0 44 23961.5 45 27393.0 46 39127.0 47 50861.0 48 45304.0 49 39747.0 50 39257.0 51 38767.0 52 32728.5 53 26690.0 54 22714.0 55 18738.0 56 15628.0 57 12518.0 58 10366.5 59 8215.0 60 6980.0 61 5745.0 62 4785.0 63 3825.0 64 3097.5 65 2370.0 66 1865.0 67 1360.0 68 989.5 69 619.0 70 449.0 71 279.0 72 225.0 73 171.0 74 142.5 75 74.0 76 34.0 77 28.5 78 23.0 79 23.5 80 24.0 81 15.0 82 6.0 83 4.5 84 3.0 85 2.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 337826.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.10791065231376 #Duplication Level Percentage of deduplicated Percentage of total 1 76.09623056201349 34.32541969169172 2 10.340887010566304 9.329116146765935 3 3.8088608405259974 5.1542926344463025 4 2.1056749211700674 3.799303848278289 5 1.4391325564139397 3.2458131385777946 6 0.9922559503418551 2.685515565134825 7 0.7913018794017415 2.49857821325432 8 0.6025302144529824 2.174310326309166 9 0.5000824475759443 2.0301906927641467 >10 3.2408318117507466 24.219614524349986 >50 0.05171387783370738 1.5916225522894536 >100 0.020552951446729858 1.6544261479265794 >500 0.005966985903889313 1.8117342017605242 >1k 0.003977990602592876 5.480062316450948 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGC 4856 1.4374263674199144 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTC 4778 1.414337558388046 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCG 4412 1.3059977621615861 No Hit GCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC 1991 0.589356651057053 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1236 0.36586882004345433 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCT 1051 0.3111069011858176 No Hit GAACTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCT 911 0.26966544907733564 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGAGCATT 847 0.25072078525631536 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTC 729 0.21579156133630922 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGAGCATTCGTA 720 0.21312746798647825 No Hit CCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC 635 0.18796658634918567 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGC 605 0.17908627518308243 No Hit CTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGCT 567 0.1678378810393516 No Hit GAATGCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTT 524 0.15510943503460362 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCG 520 0.15392539354578985 No Hit GAATATGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTC 469 0.1388288645634143 No Hit TCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC 374 0.11070787920408731 No Hit CGCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTG 359 0.10626772362103568 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.96010372203442E-4 0.0 0.0 0.17523814034443766 0.0 2 2.96010372203442E-4 0.0 0.0 1.1908497273744472 0.0 3 2.96010372203442E-4 0.0 0.0 1.6002320721318075 0.0 4 2.96010372203442E-4 0.0 0.0 2.366010905022112 0.0 5 2.96010372203442E-4 0.0 0.0 5.108250993114798 0.0 6 2.96010372203442E-4 0.0 0.0 6.204969422128551 0.0 7 2.96010372203442E-4 0.0 0.0 7.3602979048385855 0.0 8 2.96010372203442E-4 0.0 0.0 8.927968836028015 0.0 9 2.96010372203442E-4 0.0 0.0 9.408689680486404 0.0 10 2.96010372203442E-4 0.0 0.0 12.12251277284756 0.0 11 2.96010372203442E-4 0.0 0.0 13.908935369095333 0.0 12 2.96010372203442E-4 0.0 0.0 16.871111163735176 0.0 13 2.96010372203442E-4 0.0 0.0 17.52411004481597 0.0 14 2.96010372203442E-4 0.0 0.0 17.789335338310256 0.0 15 2.96010372203442E-4 0.0 0.0 18.423389555570026 0.0 16 2.96010372203442E-4 0.0 0.0 19.417096375056982 0.0 17 2.96010372203442E-4 0.0 0.0 20.658267865706016 0.0 18 2.96010372203442E-4 0.0 0.0 21.865102153179446 0.0 19 2.96010372203442E-4 0.0 0.0 22.945244001349806 0.0 20 2.96010372203442E-4 0.0 0.0 23.686157962975024 0.0 21 5.92020744406884E-4 0.0 0.0 24.566196799535856 0.0 22 5.92020744406884E-4 0.0 0.0 25.625617921651976 0.0 23 5.92020744406884E-4 0.0 0.0 26.661950234736224 0.0 24 5.92020744406884E-4 0.0 0.0 27.457034094474672 0.0 25 5.92020744406884E-4 0.0 0.0 28.13400981570394 0.0 26 5.92020744406884E-4 0.0 0.0 28.77280019891897 0.0 27 8.880311166103261E-4 0.0 0.0 29.450367940892647 0.0 28 8.880311166103261E-4 0.0 0.0 30.12201547542226 0.0 29 8.880311166103261E-4 0.0 0.0 30.8395446176434 0.0 30 8.880311166103261E-4 0.0 0.0 31.623972103982524 0.0 31 8.880311166103261E-4 0.0 0.0 32.360149899652484 0.0 32 8.880311166103261E-4 0.0 0.0 33.04245380758142 0.0 33 8.880311166103261E-4 0.0 0.0 33.73334201630425 0.0 34 8.880311166103261E-4 0.0 0.0 34.38663690775725 0.0 35 8.880311166103261E-4 0.0 0.0 35.04822008963194 0.0 36 0.001184041488813768 0.0 0.0 35.69914689810731 0.0 37 0.001184041488813768 0.0 0.0 36.35451386216573 0.0 38 0.001184041488813768 0.0 0.0 37.007808753618725 0.0 39 0.001184041488813768 0.0 0.0 37.65725551023308 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 20 7.0262083E-4 45.0 1 CGGCGCC 40 6.7902874E-9 45.0 31 CCCTCGA 40 6.7902874E-9 45.0 41 CACGGGT 20 7.0262083E-4 45.0 4 GCGCCCA 20 7.0262083E-4 45.0 33 CTGCGCG 20 7.0262083E-4 45.0 1 TTAAGCG 20 7.0262083E-4 45.0 1 AGTTACG 20 7.0262083E-4 45.0 1 GACGATA 20 7.0262083E-4 45.0 23 TTCGCGG 20 7.0262083E-4 45.0 2 CGATCTA 20 7.0262083E-4 45.0 10 CGCCCAC 20 7.0262083E-4 45.0 34 CTTACGG 20 7.0262083E-4 45.0 2 TCACGGG 30 2.1609358E-6 44.999996 3 CGGGTGC 25 3.8849394E-5 44.999996 6 CGGCGCT 25 3.8849394E-5 44.999996 9 ACGCCGG 30 2.1609358E-6 44.999996 27 TACGGGA 120 0.0 44.999996 4 TCGATGG 25 3.8849394E-5 44.999996 2 CGTTAGG 25 3.8849394E-5 44.999996 2 >>END_MODULE