##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935821.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 519587 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.011070330858935 33.0 31.0 34.0 30.0 34.0 2 32.17784509620141 33.0 31.0 34.0 30.0 34.0 3 31.97510137859492 33.0 31.0 34.0 30.0 34.0 4 35.71007165306291 37.0 35.0 37.0 33.0 37.0 5 32.047651307673206 37.0 35.0 37.0 0.0 37.0 6 33.846060428763614 37.0 35.0 37.0 17.0 37.0 7 35.48831860689355 37.0 35.0 37.0 32.0 37.0 8 35.74227415235562 37.0 35.0 37.0 35.0 37.0 9 37.70501186519293 39.0 37.0 39.0 35.0 39.0 10 37.403728345782326 39.0 37.0 39.0 34.0 39.0 11 37.38586993131083 39.0 37.0 39.0 34.0 39.0 12 37.40348777009432 39.0 37.0 39.0 35.0 39.0 13 37.405497058240485 39.0 37.0 39.0 35.0 39.0 14 38.68575618712554 40.0 38.0 41.0 35.0 41.0 15 38.77738857977586 40.0 38.0 41.0 35.0 41.0 16 38.698524020038995 40.0 38.0 41.0 35.0 41.0 17 38.66969727880028 40.0 38.0 41.0 34.0 41.0 18 38.42789754170139 40.0 38.0 41.0 34.0 41.0 19 38.15670330474011 40.0 37.0 41.0 34.0 41.0 20 38.03620952795201 40.0 36.0 41.0 34.0 41.0 21 37.956971594747365 40.0 35.0 41.0 34.0 41.0 22 38.008672272400965 40.0 35.0 41.0 34.0 41.0 23 38.01455001761014 40.0 35.0 41.0 34.0 41.0 24 37.98051529387764 40.0 35.0 41.0 34.0 41.0 25 37.72134021828876 40.0 35.0 41.0 33.0 41.0 26 37.75958982807499 40.0 35.0 41.0 34.0 41.0 27 37.72446577762723 40.0 35.0 41.0 34.0 41.0 28 37.599683979776245 40.0 35.0 41.0 33.0 41.0 29 37.51330383554631 40.0 35.0 41.0 33.0 41.0 30 37.250031274839436 40.0 35.0 41.0 33.0 41.0 31 37.06957063975812 40.0 35.0 41.0 32.0 41.0 32 36.70637256128425 39.0 35.0 41.0 31.0 41.0 33 36.30326393847421 39.0 35.0 41.0 30.0 41.0 34 35.900184184746735 39.0 35.0 41.0 25.0 41.0 35 35.626260857180796 39.0 35.0 41.0 24.0 41.0 36 35.429512285719234 39.0 35.0 41.0 23.0 41.0 37 35.3753327161765 39.0 35.0 41.0 23.0 41.0 38 35.232838773872324 39.0 35.0 41.0 22.0 41.0 39 35.14100044843308 39.0 35.0 41.0 21.0 41.0 40 35.05956269113739 39.0 35.0 41.0 21.0 41.0 41 34.92018083593315 39.0 35.0 41.0 20.0 41.0 42 34.87168077723269 39.0 35.0 41.0 20.0 41.0 43 34.830657810915206 39.0 35.0 41.0 19.0 41.0 44 34.79297403514715 39.0 35.0 41.0 18.0 41.0 45 34.80171174413525 39.0 35.0 41.0 20.0 41.0 46 34.667432018122085 39.0 34.0 41.0 20.0 41.0 47 34.55765252017468 38.0 34.0 41.0 20.0 41.0 48 34.50635216046591 38.0 34.0 40.0 20.0 41.0 49 34.47071039113758 38.0 34.0 40.0 20.0 41.0 50 34.36737062320651 38.0 34.0 40.0 19.0 41.0 51 33.39245015752896 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 5.0 9 16.0 10 14.0 11 14.0 12 4.0 13 11.0 14 16.0 15 19.0 16 49.0 17 88.0 18 179.0 19 366.0 20 749.0 21 1222.0 22 1857.0 23 2952.0 24 4622.0 25 7782.0 26 10920.0 27 12081.0 28 11024.0 29 9732.0 30 9330.0 31 10314.0 32 12351.0 33 16615.0 34 26259.0 35 34326.0 36 38796.0 37 56978.0 38 96634.0 39 154156.0 40 103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.674202780285114 16.941532409394384 20.44816363765837 22.93610117266213 2 41.681951242044164 22.41645768658569 20.807102564151915 15.094488507218232 3 28.246665139812965 22.78752162775435 34.77954606254583 14.186267169886852 4 24.602232157463526 22.02268340046999 36.69414361791192 16.68094082415457 5 20.951255516400526 33.54029257852872 29.590424702696566 15.918027202374194 6 22.099090238978267 30.670898232634762 33.18019888873278 14.049812639654185 7 69.99232082403908 4.751081147141865 20.707600459595792 4.548997569223248 8 70.91382193934798 5.276690910280665 19.235277249045875 4.574209901325476 9 64.95216393019841 6.201078933845535 20.854832780650785 7.9919243553052715 10 31.69690542681014 26.832465015483454 27.394449822647605 14.076179735058805 11 24.38840848597059 22.70880526264129 35.379638058688926 17.5231481926992 12 21.2035712979732 20.618106303660408 38.475173551301324 19.703148847065073 13 21.229553472277022 20.86407088706992 40.501205765348246 17.40516987530481 14 18.103609212701627 25.231963078368015 38.12585765232772 18.538570056602648 15 17.80625766233566 24.276203985088156 39.75330406649897 18.16423428607721 16 20.370217114746904 24.854355478485797 36.74360597936438 18.03182142740292 17 20.234147505615034 25.020448933479862 35.76090240902871 18.984501151876394 18 20.561330441292796 23.848556642102285 35.90447797962612 19.685634936978794 19 19.4362060636621 25.859576933218115 34.515682647949234 20.18853435517055 20 21.056723898019 25.470229239761583 34.972968915696505 18.50007794652291 21 20.338268663380724 25.934636547873602 36.424506386803365 17.302588401942312 22 20.037260362557184 22.208985213255914 37.04442181963752 20.70933260454938 23 19.198902205020527 24.588952379486013 36.55210773171769 19.66003768377577 24 19.606726111315336 23.953447642069566 36.56192321978802 19.877903026827077 25 20.20412365975284 26.56109563942131 33.77143769955753 19.463343001268317 26 19.876555802974284 24.823176869321212 34.61518475250536 20.68508257519915 27 21.579061831801027 24.022156058561897 33.86208661879531 20.536695490841765 28 19.39809887468316 25.172300307744422 34.60979585709419 20.819804960478226 29 21.38448421534796 24.162652260352935 33.75719561882803 20.695667905471076 30 21.561740382265146 25.41172123244038 33.53952273632712 19.487015648967354 31 21.63583769416864 24.894002351867925 31.79775475521905 21.67240519874439 32 21.97841747387829 26.18752971109747 32.049493155140524 19.784559659883715 33 22.39490210494104 26.094378804704505 30.836414305977634 20.674304784376822 34 23.180141150567664 25.84244794423263 31.198432601277553 19.778978303922155 35 22.380660024211537 26.481801892657053 31.651484736916053 19.48605334621536 36 22.207253068302325 28.43469909755248 30.276354104317466 19.081693729827727 37 21.206650666779577 28.329808097585197 30.85700758487029 19.606533650764934 38 20.898713786141684 27.29821954744826 30.830255568364873 20.972811098045177 39 22.37257668109479 26.497776118340145 30.20572108232115 20.923926118243912 40 22.911273761660702 25.202324153606614 32.37629116971748 19.510110915015193 41 20.92161659163913 26.93735601545073 31.460178949819763 20.680848443090376 42 21.39776399332547 26.818222934753948 31.881860015743275 19.902153056177312 43 21.74496282624469 26.344385059672394 30.93610887108415 20.974543242998767 44 21.534988365759727 26.086872843238957 30.37181453731521 22.006324253686103 45 21.69819491249781 24.51235308042734 30.157028563070288 23.632423444004566 46 22.77866844243601 25.28335004532446 29.751899104481062 22.18608240775847 47 20.838473633866897 25.60167979568388 32.323172057807454 21.23667451264177 48 20.682580588043965 25.053359687598036 31.81218929649895 22.45187042785905 49 20.971463874192388 24.46077365292049 32.63495814945331 21.932804323433803 50 19.76646836814624 24.317005621772676 33.98487644994967 21.93164956013141 51 20.110395371708684 23.472873647724057 32.309122437628346 24.10760854293891 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 155.0 1 343.5 2 532.0 3 9867.0 4 19202.0 5 12628.0 6 6054.0 7 5794.0 8 5534.0 9 5558.0 10 5582.0 11 5442.5 12 5303.0 13 5094.5 14 4886.0 15 4629.5 16 4373.0 17 4101.5 18 3830.0 19 3651.5 20 3473.0 21 3376.5 22 3280.0 23 3254.5 24 3229.0 25 3537.0 26 4321.5 27 4798.0 28 5633.5 29 6469.0 30 7408.5 31 8348.0 32 9156.5 33 9965.0 34 11693.5 35 13422.0 36 14302.0 37 15182.0 38 16675.0 39 18168.0 40 19417.0 41 20666.0 42 22672.0 43 24678.0 44 27847.5 45 31017.0 46 41209.0 47 51401.0 48 49516.0 49 47631.0 50 46453.5 51 45276.0 52 40450.5 53 35625.0 54 31593.5 55 27562.0 56 25036.0 57 22510.0 58 20373.5 59 18237.0 60 16886.0 61 15535.0 62 13509.5 63 11484.0 64 9795.0 65 8106.0 66 6633.5 67 5161.0 68 4302.5 69 3444.0 70 2817.5 71 2191.0 72 1835.0 73 1479.0 74 1206.5 75 747.0 76 560.0 77 394.0 78 228.0 79 170.0 80 112.0 81 105.5 82 99.0 83 56.0 84 13.0 85 8.5 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 519587.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.332144829903754 #Duplication Level Percentage of deduplicated Percentage of total 1 73.4805388457446 34.04510967980408 2 9.696553153120451 8.985242100824733 3 4.579128158050275 6.364824870404274 4 2.9175200526856684 5.4069984650072325 5 2.1276598048407673 4.92895211133236 6 1.5868781480838454 4.4114080910658116 7 1.2437368382586262 4.0337496724339665 8 1.0232049428263077 3.79258236813615 9 0.7479275010353754 3.11877767702151 >10 2.543850807412296 16.11496211335093 >50 0.03196930829011666 1.0309977668712862 >100 0.013460761377101092 1.1364362903293104 >500 0.003365190344275273 1.1676195876115416 >1k 0.0037858391373096823 3.324529281501866 >5k 0.0 0.0 >10k+ 4.206487930344091E-4 2.1378099243049573 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10969 2.1110997773231435 No Hit GAATCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTC 4295 0.8266180639623394 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTT 2553 0.4913517851678352 No Hit CGTTCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTC 2049 0.3943516677668995 No Hit CGCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTG 1708 0.32872262008094894 TruSeq Adapter, Index 21 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCT 1418 0.27290906046533114 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCT 1398 0.26905984945735745 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGC 1273 0.2450022806575222 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1249 0.24038322744795387 No Hit GCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 1115 0.21459351369453047 TruSeq Adapter, Index 15 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCG 1000 0.19246055039868204 No Hit CGTCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCT 932 0.17937323297157165 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTT 915 0.17610140361479404 No Hit CCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 863 0.1660934549940626 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTC 617 0.11874815959598681 No Hit CTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGCT 599 0.11528386968881053 TruSeq Adapter, Index 21 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCC 549 0.10566084216887643 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.773816511960461E-4 0.0 0.0 0.12182752840236573 0.0 2 5.773816511960461E-4 0.0 0.0 0.5648717154201317 0.0 3 5.773816511960461E-4 0.0 0.0 1.0523742895799932 0.0 4 5.773816511960461E-4 0.0 0.0 1.7342620196425238 0.0 5 5.773816511960461E-4 0.0 0.0 3.6076730172232945 0.0 6 5.773816511960461E-4 0.0 0.0 5.404292255194991 0.0 7 5.773816511960461E-4 0.0 0.0 6.5627123080446585 0.0 8 5.773816511960461E-4 0.0 0.0 7.906471870928256 0.0 9 5.773816511960461E-4 0.0 0.0 8.683820033988534 0.0 10 5.773816511960461E-4 0.0 0.0 9.849938508854148 0.0 11 5.773816511960461E-4 0.0 0.0 10.754888016828751 0.0 12 5.773816511960461E-4 0.0 0.0 11.797831739439209 0.0 13 5.773816511960461E-4 0.0 0.0 12.323056581477212 0.0 14 5.773816511960461E-4 0.0 0.0 12.659862544674905 0.0 15 5.773816511960461E-4 0.0 0.0 12.981079203290305 0.0 16 5.773816511960461E-4 0.0 0.0 13.358109421521323 0.0 17 5.773816511960461E-4 0.0 0.0 13.779982947995235 0.0 18 5.773816511960461E-4 0.0 0.0 14.250356533169613 0.0 19 5.773816511960461E-4 0.0 0.0 14.631043501858207 0.0 20 5.773816511960461E-4 0.0 0.0 14.957071674233575 0.0 21 5.773816511960461E-4 0.0 0.0 15.344494762186121 0.0 22 5.773816511960461E-4 0.0 0.0 15.75366589233372 0.0 23 5.773816511960461E-4 0.0 0.0 16.14378342799185 0.0 24 5.773816511960461E-4 0.0 0.0 16.49791084072542 0.0 25 5.773816511960461E-4 0.0 0.0 16.826248539705574 0.0 26 5.773816511960461E-4 0.0 0.0 17.13957431575463 0.0 27 5.773816511960461E-4 0.0 0.0 17.499283084449765 0.0 28 5.773816511960461E-4 0.0 0.0 17.824926335724335 0.0 29 5.773816511960461E-4 0.0 0.0 18.173857313597146 0.0 30 5.773816511960461E-4 0.0 0.0 18.59245901071428 0.0 31 5.773816511960461E-4 0.0 0.0 18.981614243620413 0.0 32 5.773816511960461E-4 0.0 0.0 19.393287360923196 0.0 33 5.773816511960461E-4 0.0 0.0 19.77532155346458 0.0 34 5.773816511960461E-4 0.0 0.0 20.16216725976593 0.0 35 5.773816511960461E-4 0.0 0.0 20.544008991756915 0.0 36 5.773816511960461E-4 0.0 0.0 20.877543125597832 0.0 37 5.773816511960461E-4 0.0 0.0 21.253611041076855 0.0 38 5.773816511960461E-4 0.0 0.0 21.664129395077243 0.0 39 5.773816511960461E-4 0.0 0.0 22.153171653640296 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATTC 30 2.1631968E-6 45.000004 9 GCAAACG 20 7.029715E-4 45.0 1 CATACGA 20 7.029715E-4 45.0 18 ACATACG 20 7.029715E-4 45.0 17 GCGTTAG 50 2.1827873E-11 44.999996 1 TGCGAAG 50 2.1827873E-11 44.999996 1 CGTTTTT 5695 0.0 44.407375 1 CGTTATT 775 0.0 43.83871 1 TTACGGG 115 0.0 43.043476 3 AACACGT 105 0.0 42.857143 41 TCGCAAG 65 0.0 41.53846 1 ACGACCA 120 0.0 41.250004 28 ACACGAC 115 0.0 41.086956 26 GTTATTT 855 0.0 39.73684 2 CACGACC 125 0.0 39.6 27 CGTTTCT 315 0.0 39.285713 1 CAAACGG 35 6.241682E-6 38.571426 2 TTGGACG 35 6.241682E-6 38.571426 1 TAAACGG 35 6.241682E-6 38.571426 2 ACGGGCG 140 0.0 38.571426 5 >>END_MODULE