##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935817.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 443278 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08026565721737 33.0 31.0 34.0 30.0 34.0 2 32.17542264673636 33.0 31.0 34.0 30.0 34.0 3 32.143844269284735 33.0 31.0 34.0 30.0 34.0 4 35.76617156727832 37.0 35.0 37.0 35.0 37.0 5 31.93810430474781 37.0 35.0 37.0 0.0 37.0 6 33.792365062105496 37.0 35.0 37.0 17.0 37.0 7 35.50325078167651 37.0 35.0 37.0 32.0 37.0 8 35.75435279892077 37.0 35.0 37.0 35.0 37.0 9 37.705701613885644 39.0 37.0 39.0 35.0 39.0 10 37.26865984777047 39.0 37.0 39.0 34.0 39.0 11 37.29086036302275 39.0 37.0 39.0 34.0 39.0 12 37.24455082363664 39.0 37.0 39.0 34.0 39.0 13 37.18651500864018 39.0 37.0 39.0 34.0 39.0 14 38.39910846015367 40.0 38.0 41.0 34.0 41.0 15 38.53525327221292 40.0 38.0 41.0 34.0 41.0 16 38.48995438528418 40.0 38.0 41.0 34.0 41.0 17 38.47947563380091 40.0 38.0 41.0 34.0 41.0 18 38.4293287733657 40.0 38.0 41.0 34.0 41.0 19 38.30182864929006 40.0 37.0 41.0 34.0 41.0 20 38.38336438984114 40.0 37.0 41.0 34.0 41.0 21 38.32697314100858 40.0 37.0 41.0 34.0 41.0 22 38.404145930995895 40.0 37.0 41.0 34.0 41.0 23 38.394565035936814 40.0 37.0 41.0 34.0 41.0 24 38.3639950550219 40.0 37.0 41.0 34.0 41.0 25 38.11286596672968 40.0 37.0 41.0 34.0 41.0 26 38.153515401170374 40.0 37.0 41.0 34.0 41.0 27 38.15012700833337 40.0 37.0 41.0 34.0 41.0 28 38.08754100135806 40.0 37.0 41.0 34.0 41.0 29 38.05517530759478 40.0 37.0 41.0 34.0 41.0 30 37.931341054597794 40.0 36.0 41.0 34.0 41.0 31 37.934122604776235 40.0 37.0 41.0 34.0 41.0 32 37.88134308492639 40.0 37.0 41.0 34.0 41.0 33 37.844639255726655 40.0 37.0 41.0 34.0 41.0 34 37.75496189749999 40.0 36.0 41.0 33.0 41.0 35 37.76670396455498 40.0 37.0 41.0 33.0 41.0 36 37.68965525020416 40.0 36.0 41.0 33.0 41.0 37 37.64995781428359 40.0 36.0 41.0 33.0 41.0 38 37.533119171264985 40.0 36.0 41.0 33.0 41.0 39 37.4694232513231 40.0 36.0 41.0 33.0 41.0 40 37.39024043602435 40.0 36.0 41.0 33.0 41.0 41 37.307707578539876 40.0 35.0 41.0 33.0 41.0 42 37.31004020050623 40.0 35.0 41.0 33.0 41.0 43 37.258361569940305 40.0 35.0 41.0 33.0 41.0 44 37.21865511033708 40.0 35.0 41.0 33.0 41.0 45 37.206364854560796 39.0 35.0 41.0 33.0 41.0 46 37.07124648640357 39.0 35.0 41.0 32.0 41.0 47 36.9921020217561 39.0 35.0 41.0 32.0 41.0 48 36.97314326449767 39.0 35.0 41.0 32.0 41.0 49 36.93010255415338 39.0 35.0 41.0 32.0 41.0 50 36.83518243630408 39.0 35.0 41.0 32.0 41.0 51 35.81133058712591 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 5.0 9 15.0 10 18.0 11 17.0 12 18.0 13 7.0 14 12.0 15 15.0 16 18.0 17 45.0 18 74.0 19 178.0 20 296.0 21 482.0 22 771.0 23 1109.0 24 1485.0 25 2088.0 26 2646.0 27 3006.0 28 3567.0 29 4240.0 30 5438.0 31 7398.0 32 9979.0 33 14671.0 34 25237.0 35 33730.0 36 32952.0 37 51938.0 38 88425.0 39 153268.0 40 127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.27655331417304 20.14153646244569 23.741083473576403 10.840826749804863 2 32.243422863304744 25.262701961297424 24.81332256507203 17.6805526103258 3 32.639111347732126 25.315490504829924 25.219613876619185 16.825784270818765 4 29.09370643253218 25.214876443225243 26.624826858089058 19.06659026615352 5 23.63528079444502 37.33932205072212 20.982318093837275 18.04307906099558 6 25.5683792112399 36.030662473662126 23.62625711178989 14.774701203308084 7 80.14677019838567 5.706351319036812 9.496523626257112 4.650354856320413 8 80.78429337797049 6.440427903031506 7.72517472105541 5.050103997942601 9 74.99041233717892 6.936279264930811 10.09659852282315 7.9767098750671135 10 39.118566678247056 25.477014424356724 19.010643433691722 16.393775463704493 11 30.873853428322633 26.10731865781744 22.829917117474814 20.188910796385112 12 27.889270390138922 22.45746461588439 28.239163685091523 21.41410130888517 13 25.083356268526746 23.584522579509922 30.632921101430703 20.699200050532625 14 21.004877300475098 28.118923113711936 28.323309525850593 22.552890059962373 15 20.167028365946425 26.3696822310153 33.197000527885436 20.26628887515284 16 22.18743091242967 24.92092998073444 30.472525142235796 22.419113964600093 17 21.851975509725275 25.47949593708688 28.30751808120412 24.36101047198372 18 22.68057516953244 25.473179359228293 29.266509955377888 22.57973551586138 19 23.681527168052554 27.45184737343157 26.750707231128096 22.11591822738778 20 25.464606860705924 25.97173782592414 28.223597832511427 20.340057480858516 21 24.366650273643174 27.130604270909004 27.88250262814757 20.62024282730025 22 22.078695536435376 25.017257793077935 27.881825851948438 25.022220818538255 23 21.76534815623604 27.13692084876759 28.18299126056335 22.91473973443302 24 22.882480068940936 25.072753441406974 28.60101335956217 23.44375313008992 25 21.384323156123244 28.35895307233835 26.415703012556452 23.841020758981948 26 20.227035855603027 28.204873691002035 27.673153190548593 23.89493726284634 27 22.684861418793623 27.19625156222506 28.070646411507 22.048240607474316 28 19.764120935394942 27.44553079557298 29.733485532780783 23.05686273625129 29 21.089925509499682 26.587604167136654 28.174418762040975 24.148051561322692 30 22.358204106677977 26.13799917884488 29.331931654627567 22.171865059849573 31 21.604275420842 27.16624781739676 27.85272447538565 23.376752286375595 32 22.280600435843873 27.358452257950994 26.9142614792523 23.446685826952837 33 23.29125289321825 25.234954137132902 27.26031970907647 24.21347326057237 34 20.793497534278714 25.55055743799602 29.424424401842636 24.23152062588263 35 20.647539467332013 24.83001637798402 28.0054503043237 26.516993850360272 36 21.891002937208704 26.738976443676428 28.11080179932232 23.259218819792547 37 20.48037574614576 25.973542562455165 30.45560573725743 23.090475954141645 38 21.525994973808764 25.56273940958044 27.061121914464515 25.850143702146283 39 22.99911116725847 23.997581653048424 27.93957742094126 25.063729758751847 40 22.804650806040453 23.864256741818902 29.819210518004503 23.511881934136138 41 19.77607731491299 25.543112899805543 28.546420079498645 26.13438970578283 42 20.469547326959606 25.32519096368419 28.35128294208149 25.85397876727471 43 21.69270751086226 24.5579523459319 28.41715582546393 25.332184317741913 44 21.485162809794307 24.921381164867192 27.945893998799846 25.64756202653865 45 21.553066021774146 23.70972617634983 27.62059023908247 27.11661756279355 46 22.51047875148327 25.52822382342458 27.799259155654017 24.162038269438142 47 19.905115976881323 25.18667743492797 30.643298336484104 24.264908251706604 48 20.388108590997074 24.14353971999513 29.104083667585577 26.36426802142222 49 21.092181430163464 23.06453286650815 30.810236465603978 25.03304923772441 50 20.674836107363774 23.4915786481621 29.784920523915016 26.048664720559106 51 20.42848957087877 23.076940430158952 27.87483249789072 28.619737501071562 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 168.0 1 408.0 2 648.0 3 1101.5 4 1555.0 5 1067.5 6 580.0 7 580.0 8 580.0 9 613.5 10 647.0 11 626.5 12 606.0 13 665.5 14 725.0 15 711.5 16 698.0 17 655.5 18 613.0 19 702.0 20 791.0 21 943.0 22 1095.0 23 1357.0 24 1619.0 25 1819.5 26 2711.5 27 3403.0 28 3848.0 29 4293.0 30 5664.5 31 7036.0 32 7709.5 33 8383.0 34 9367.5 35 10352.0 36 11239.5 37 12127.0 38 13787.5 39 15448.0 40 17684.0 41 19920.0 42 22430.0 43 24940.0 44 28029.5 45 31119.0 46 37849.5 47 44580.0 48 45909.0 49 47238.0 50 46008.5 51 44779.0 52 39486.5 53 34194.0 54 30050.5 55 25907.0 56 24033.0 57 22159.0 58 20874.5 59 19590.0 60 18536.5 61 17483.0 62 16082.5 63 14682.0 64 11688.0 65 8694.0 66 6921.5 67 5149.0 68 4518.5 69 3888.0 70 3030.0 71 2172.0 72 1805.0 73 1438.0 74 1208.0 75 780.5 76 583.0 77 389.0 78 195.0 79 147.5 80 100.0 81 76.5 82 53.0 83 37.5 84 22.0 85 22.0 86 22.0 87 11.5 88 1.0 89 0.5 90 0.0 91 1.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 443278.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.13175730598929 #Duplication Level Percentage of deduplicated Percentage of total 1 71.51650197987158 25.12500390930151 2 10.440952941951545 7.336180495997932 3 4.13869909856595 4.361993168800068 4 2.199105287466177 3.090337329983182 5 1.4140192418646187 2.4838490415593375 6 1.0530875627598049 2.219809000609994 7 0.8476271966988542 2.084504307226614 8 0.7490499296332536 2.105235227035506 9 0.6024025839550196 1.904711524200773 >10 6.937481406436528 43.95684466618812 >50 0.0667339448209236 1.6129117106254853 >100 0.02980350933749986 1.8234597394610166 >500 0.0019437071307065125 0.5230695894746493 >1k 0.0025916095076086837 1.3720902895357645 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 1620 0.3654591475326996 TruSeq Adapter, Index 22 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTC 1536 0.34650941395692997 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGC 1510 0.3406440202310965 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCG 1362 0.3072563944071215 No Hit CCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 912 0.20573996453692717 TruSeq Adapter, Index 22 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 722 0.16287747192506735 No Hit CTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGCT 664 0.14979313207513117 TruSeq Adapter, Index 20 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.767761991346288E-4 0.0 0.0 0.15543293373458641 0.0 2 6.767761991346288E-4 0.0 0.0 0.9204156308230952 0.0 3 6.767761991346288E-4 0.0 0.0 1.2152644615794153 0.0 4 6.767761991346288E-4 0.0 0.0 1.6517851100212508 0.0 5 6.767761991346288E-4 0.0 0.0 3.097604663439196 0.0 6 6.767761991346288E-4 0.0 0.0 3.886500119563795 0.0 7 6.767761991346288E-4 0.0 0.0 4.6600553151746755 0.0 8 6.767761991346288E-4 0.0 0.0 5.85027905738611 0.0 9 6.767761991346288E-4 0.0 0.0 6.246193133879868 0.0 10 6.767761991346288E-4 0.0 0.0 7.542219555222682 0.0 11 6.767761991346288E-4 0.0 0.0 8.972022071927775 0.0 12 6.767761991346288E-4 0.0 0.0 10.41039708715524 0.0 13 6.767761991346288E-4 0.0 0.0 10.88030536142105 0.0 14 6.767761991346288E-4 0.0 0.0 11.075216906771823 0.0 15 6.767761991346288E-4 0.0 0.0 11.47496604839401 0.0 16 6.767761991346288E-4 0.0 0.0 12.195958292538768 0.0 17 6.767761991346288E-4 0.0 0.0 13.064487748094875 0.0 18 6.767761991346288E-4 0.0 0.0 13.956253186487938 0.0 19 6.767761991346288E-4 0.0 0.0 14.56963801497029 0.0 20 6.767761991346288E-4 0.0 0.0 15.142641863570942 0.0 21 6.767761991346288E-4 0.0 0.0 15.821448391302974 0.0 22 6.767761991346288E-4 0.0 0.0 16.59071733765267 0.0 23 6.767761991346288E-4 0.0 0.0 17.346901944152428 0.0 24 6.767761991346288E-4 0.0 0.0 17.944495327988307 0.0 25 6.767761991346288E-4 0.0 0.0 18.489074576225303 0.0 26 6.767761991346288E-4 0.0 0.0 18.966201796615216 0.0 27 6.767761991346288E-4 0.0 0.0 19.449420002797343 0.0 28 6.767761991346288E-4 0.0 0.0 19.922937750125204 0.0 29 6.767761991346288E-4 0.0 0.0 20.454207066445885 0.0 30 6.767761991346288E-4 0.0 0.0 21.0400696628301 0.0 31 6.767761991346288E-4 0.0 0.0 21.57404608394732 0.0 32 6.767761991346288E-4 0.0 0.0 22.101029151006816 0.0 33 6.767761991346288E-4 0.0 0.0 22.60973926068968 0.0 34 6.767761991346288E-4 0.0 0.0 23.119351738638056 0.0 35 6.767761991346288E-4 0.0 0.0 23.656260856618193 0.0 36 9.023682655128385E-4 0.0 0.0 24.15324017884939 0.0 37 9.023682655128385E-4 0.0 0.0 24.65856640753658 0.0 38 0.001127960331891048 0.0 0.0 25.189384539724507 0.0 39 0.001127960331891048 0.0 0.0 25.690875703283268 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 20 7.028591E-4 45.000004 1 AGGTACG 20 7.028591E-4 45.000004 1 GTATTCG 20 7.028591E-4 45.000004 22 GATCGGA 20 7.028591E-4 45.000004 15 GATCGCA 20 7.028591E-4 45.000004 10 ATCCGAT 20 7.028591E-4 45.000004 29 CTAACGG 20 7.028591E-4 45.000004 2 TGCGACG 20 7.028591E-4 45.000004 1 TGCGAAT 20 7.028591E-4 45.000004 27 TATTCGG 20 7.028591E-4 45.000004 23 TTGCGTG 20 7.028591E-4 45.000004 1 CTACCTT 45 3.8380676E-10 45.000004 17 CGAGACA 20 7.028591E-4 45.000004 22 ATCGGAA 20 7.028591E-4 45.000004 16 TTACCGG 35 1.2096643E-7 45.000004 2 TGTCGTA 20 7.028591E-4 45.000004 37 TCAACGG 40 6.7993824E-9 45.000004 2 ATCGAAC 20 7.028591E-4 45.000004 39 TGCAACG 20 7.028591E-4 45.000004 1 CCCGATG 20 7.028591E-4 45.000004 31 >>END_MODULE