##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935815.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 529282 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.049070249885695 33.0 31.0 34.0 30.0 34.0 2 32.159347946841194 33.0 31.0 34.0 30.0 34.0 3 32.105465517436826 33.0 31.0 34.0 30.0 34.0 4 35.74659633238992 37.0 35.0 37.0 33.0 37.0 5 32.02711597976126 37.0 35.0 37.0 0.0 37.0 6 33.827810127682405 37.0 35.0 37.0 17.0 37.0 7 35.475555563952675 37.0 35.0 37.0 32.0 37.0 8 35.72890066165107 37.0 35.0 37.0 35.0 37.0 9 37.66705083490464 39.0 37.0 39.0 35.0 39.0 10 37.29750870046591 39.0 37.0 39.0 34.0 39.0 11 37.28205946924324 39.0 37.0 39.0 34.0 39.0 12 37.16885894475913 39.0 37.0 39.0 34.0 39.0 13 37.09392346612959 39.0 37.0 39.0 33.0 39.0 14 38.16390695319319 40.0 38.0 41.0 33.0 41.0 15 38.35310855082923 40.0 38.0 41.0 34.0 41.0 16 38.33001311210281 40.0 37.0 41.0 34.0 41.0 17 38.32716774800579 40.0 37.0 41.0 34.0 41.0 18 38.256167789571535 40.0 37.0 41.0 34.0 41.0 19 38.13019524563465 40.0 37.0 41.0 34.0 41.0 20 38.20898122361992 40.0 37.0 41.0 34.0 41.0 21 38.112633718887096 40.0 37.0 41.0 34.0 41.0 22 38.203107228282846 40.0 37.0 41.0 34.0 41.0 23 38.219342429933384 40.0 37.0 41.0 34.0 41.0 24 38.19793418253408 40.0 37.0 41.0 34.0 41.0 25 37.9188258810993 40.0 36.0 41.0 34.0 41.0 26 37.98159771161687 40.0 36.0 41.0 34.0 41.0 27 37.961746290257366 40.0 36.0 41.0 34.0 41.0 28 37.86184113572727 40.0 36.0 41.0 34.0 41.0 29 37.809600553202266 40.0 36.0 41.0 33.0 41.0 30 37.65125207356381 40.0 36.0 41.0 33.0 41.0 31 37.636165597923224 40.0 36.0 41.0 33.0 41.0 32 37.58842356248654 40.0 36.0 41.0 33.0 41.0 33 37.5175331864677 40.0 36.0 41.0 33.0 41.0 34 37.39859847869378 40.0 35.0 41.0 33.0 41.0 35 37.370105161331765 40.0 35.0 41.0 33.0 41.0 36 37.280455409403686 40.0 35.0 41.0 33.0 41.0 37 37.213540229971926 40.0 35.0 41.0 32.0 41.0 38 37.08953639080868 40.0 35.0 41.0 32.0 41.0 39 36.99475326952362 39.0 35.0 41.0 32.0 41.0 40 36.90373751610672 39.0 35.0 41.0 31.0 41.0 41 36.770131990130025 39.0 35.0 41.0 31.0 41.0 42 36.77497062057655 39.0 35.0 41.0 31.0 41.0 43 36.716378036660984 39.0 35.0 41.0 31.0 41.0 44 36.68205795776165 39.0 35.0 41.0 31.0 41.0 45 36.63754104617198 39.0 35.0 41.0 31.0 41.0 46 36.52170676501373 39.0 35.0 41.0 31.0 41.0 47 36.43958419141403 39.0 35.0 41.0 31.0 41.0 48 36.41324662467267 39.0 35.0 41.0 31.0 41.0 49 36.36015583375214 39.0 35.0 41.0 31.0 41.0 50 36.24492425587872 38.0 35.0 41.0 31.0 41.0 51 35.23071443956152 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 17.0 9 28.0 10 20.0 11 26.0 12 24.0 13 18.0 14 18.0 15 26.0 16 43.0 17 77.0 18 127.0 19 232.0 20 415.0 21 697.0 22 1039.0 23 1533.0 24 2237.0 25 3133.0 26 3918.0 27 4526.0 28 5137.0 29 5990.0 30 7325.0 31 9653.0 32 13093.0 33 20041.0 34 34327.0 35 40946.0 36 42080.0 37 65037.0 38 103040.0 39 164357.0 40 102.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.500886106083335 19.995389981144267 22.593437902668143 11.910286010104254 2 33.753840107919785 23.687939510506688 23.923730638865482 18.634489742708045 3 32.56298154858847 24.224704410881156 26.116701493721685 17.095612546808695 4 28.97699147146512 25.328085973072955 25.974244353671576 19.72067820179035 5 23.29344281498332 36.395720995612926 22.21556750465725 18.095268684746504 6 25.58749400130743 33.722287929685876 24.90430432170374 15.78591374730295 7 79.11661458353014 5.835641491681183 10.420531965946319 4.627211958842356 8 79.5972657298 5.945412842303347 9.367973972286984 5.089347455609675 9 74.04540490702499 6.799777812205969 11.68148548410866 7.473331796660382 10 40.550217086543654 24.710834677922165 19.129311028903306 15.60963720663087 11 31.158059408783977 24.766003756031758 24.223570799687124 19.852366035497145 12 27.14110814272921 22.307578946572903 29.897861631417655 20.653451279280233 13 26.180183720587515 23.210500262619927 31.479816052690246 19.129499964102312 14 21.461338190227515 26.425799479294593 31.82896830045231 20.283894030025582 15 20.50967159283709 24.45482748326979 34.23789208777174 20.797608836121388 16 24.351290994214807 25.16201193314717 29.180663615992984 21.30603345664504 17 23.798844472322884 24.452938131279733 28.05649918191059 23.691718214486794 18 25.765282023571558 23.15438650851531 29.65035652072052 21.429974947192612 19 24.446325399314542 25.70274447270075 27.299246904296766 22.55168322368794 20 25.37588657842133 26.59659689919551 27.475523444968847 20.551993077414306 21 24.66964680453898 26.782887005414885 29.153079076938194 19.394387113107946 22 23.372795598565606 23.29495429657536 29.899184177810696 23.43306592704834 23 21.519719166720197 26.273328773697198 29.510922343854507 22.6960297157281 24 22.634814711250336 24.934533953544612 28.978314017858153 23.452337317346895 25 22.909148620206242 27.161702079420802 26.88434520728081 23.04480409309215 26 21.498936294829598 25.445414731655337 28.190076367607436 24.865572605907627 27 22.643316795205582 25.157288553172037 28.63709704845432 23.562297603168066 28 20.388375195075593 26.181695202179554 28.735532287136156 24.694397315608693 29 21.73246020080033 25.69499812954153 29.200690747087567 23.371850922570577 30 22.56453081722031 25.5757800189691 28.890081279922615 22.969607883887985 31 22.793898148812918 26.590173102429326 26.357593872453627 24.258334876304126 32 22.77349314732033 27.252768845341425 26.62342569745429 23.350312309883954 33 22.344043439980954 25.880154624566863 25.17108082269943 26.60472111275275 34 20.304865837115184 25.318828148321685 28.8307556274349 25.545550387128223 35 19.89317603848232 29.074293098952918 27.077248045465367 23.95528281709939 36 21.88209687841264 27.511232197580878 25.76887179235266 24.837799131653824 37 20.13557989880631 28.10392191686096 26.13087163364709 25.629626550685646 38 20.75509841634516 28.07577057220914 25.281230043719603 25.88790096772609 39 21.800665807641295 24.60238587369304 25.900937496457466 27.6960108222082 40 22.88402023873852 24.240197097199605 27.600220676312436 25.27556198774944 41 19.762999686367568 25.379665282401444 26.719593713748058 28.137741317482927 42 21.247274609754346 25.30371333240125 28.342736008403836 25.106276049440563 43 21.519341296322185 24.792832554290527 27.912152689870428 25.775673459516856 44 21.575455050426804 24.437445444961288 27.283376347580308 26.7037231570316 45 21.039256955649353 23.869695171949925 26.81349450765376 28.27755336474696 46 22.185337872816383 24.65925536859368 26.817462146832877 26.33794461175706 47 19.481675175048462 26.00541866150748 29.501853454302246 25.01105270914182 48 20.729592164479428 26.229306872328927 27.470044324197683 25.571056638993955 49 22.448146734632957 23.65997710105388 29.05653319024641 24.835342974066755 50 20.566918958135737 24.086970650806187 29.017612539251285 26.328497851806787 51 20.205296987239315 23.752177478168537 26.825019554793094 29.217505979799046 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 167.0 1 401.5 2 636.0 3 2112.0 4 3588.0 5 2317.0 6 1046.0 7 1031.5 8 1017.0 9 1045.0 10 1073.0 11 1062.0 12 1051.0 13 1043.5 14 1036.0 15 1057.0 16 1078.0 17 1127.5 18 1177.0 19 1163.0 20 1149.0 21 1379.0 22 1609.0 23 1617.5 24 1626.0 25 2055.0 26 2954.5 27 3425.0 28 4122.0 29 4819.0 30 6037.0 31 7255.0 32 8099.0 33 8943.0 34 10880.5 35 12818.0 36 13606.0 37 14394.0 38 16239.5 39 18085.0 40 19482.0 41 20879.0 42 23407.5 43 25936.0 44 29173.5 45 32411.0 46 40562.0 47 48713.0 48 50748.0 49 52783.0 50 53283.5 51 53784.0 52 47984.5 53 42185.0 54 38189.5 55 34194.0 56 31244.5 57 28295.0 58 26576.5 59 24858.0 60 22352.0 61 19846.0 62 17711.5 63 15577.0 64 14011.0 65 12445.0 66 10586.5 67 8728.0 68 8076.0 69 7424.0 70 5966.0 71 4508.0 72 3913.5 73 3319.0 74 2777.5 75 1841.5 76 1447.0 77 1050.0 78 653.0 79 492.0 80 331.0 81 216.5 82 102.0 83 86.0 84 70.0 85 51.5 86 33.0 87 30.0 88 27.0 89 18.5 90 10.0 91 8.0 92 6.0 93 3.0 94 0.0 95 1.0 96 2.0 97 3.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 529282.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.4914749291281 #Duplication Level Percentage of deduplicated Percentage of total 1 72.0357053620992 26.286891362231014 2 10.475762155846603 7.645520241471707 3 3.970065106420881 4.346205938938916 4 2.2311573285084263 3.2567288686482274 5 1.3697975222287893 2.499296597019683 6 1.059936714415663 2.3207192424336953 7 0.883632728150943 2.2571543082114047 8 0.7479334113772278 2.1834554663943493 9 0.6600592181496753 2.16778809697639 >10 6.468026456400327 41.26386849170832 >50 0.0605444063777707 1.5115828418021684 >100 0.03158838593622233 2.0141630037432243 >500 0.002632365494685194 0.6580034612572055 >1k 0.0031588385936222327 1.588622079163747 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2047 0.3867503523641461 No Hit GAATCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTTC 1588 0.3000290960206468 No Hit GCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTTCTGC 1476 0.278868353732037 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGC 1067 0.2015938573388099 No Hit CCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTTCTGC 1053 0.19894876455273372 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCG 1038 0.19611473656765202 No Hit CTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTTCTGCT 855 0.16153959514965557 Illumina Single End Adapter 1 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 833 0.15738302077153576 No Hit CGCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTTCTG 686 0.12960954651773535 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTT 534 0.10089139626890768 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16890806791086793 0.0 2 0.0 0.0 0.0 0.7969286694049675 0.0 3 1.8893519900544512E-4 0.0 0.0 1.160439992291444 0.0 4 1.8893519900544512E-4 0.0 0.0 1.6170963682876047 0.0 5 1.8893519900544512E-4 0.0 0.0 3.0240967952811544 0.0 6 1.8893519900544512E-4 0.0 0.0 4.038678813940395 0.0 7 1.8893519900544512E-4 0.0 0.0 4.90456883098235 0.0 8 1.8893519900544512E-4 0.0 0.0 6.169112117925794 0.0 9 1.8893519900544512E-4 0.0 0.0 6.711356139071421 0.0 10 1.8893519900544512E-4 0.0 0.0 7.918085255119199 0.0 11 1.8893519900544512E-4 0.0 0.0 9.269538733605149 0.0 12 1.8893519900544512E-4 0.0 0.0 10.563744846792448 0.0 13 1.8893519900544512E-4 0.0 0.0 11.084828125649464 0.0 14 1.8893519900544512E-4 0.0 0.0 11.355383330625262 0.0 15 1.8893519900544512E-4 0.0 0.0 11.755925952516806 0.0 16 1.8893519900544512E-4 0.0 0.0 12.41984424182194 0.0 17 1.8893519900544512E-4 0.0 0.0 13.232076662346348 0.0 18 1.8893519900544512E-4 0.0 0.0 14.074916585109639 0.0 19 1.8893519900544512E-4 0.0 0.0 14.615460189464217 0.0 20 1.8893519900544512E-4 0.0 0.0 15.160160368196916 0.0 21 1.8893519900544512E-4 0.0 0.0 15.781946108123835 0.0 22 1.8893519900544512E-4 0.0 0.0 16.44246356384687 0.0 23 1.8893519900544512E-4 0.0 0.0 17.0784194436992 0.0 24 1.8893519900544512E-4 0.0 0.0 17.61480647367566 0.0 25 1.8893519900544512E-4 0.0 0.0 18.092434656761423 0.0 26 1.8893519900544512E-4 0.0 0.0 18.564016913479016 0.0 27 1.8893519900544512E-4 0.0 0.0 19.100403943455472 0.0 28 1.8893519900544512E-4 0.0 0.0 19.559516477038706 0.0 29 1.8893519900544512E-4 0.0 0.0 20.0694525791544 0.0 30 1.8893519900544512E-4 0.0 0.0 20.753775869952126 0.0 31 3.7787039801089024E-4 0.0 0.0 21.244818452167276 0.0 32 5.668055970163353E-4 0.0 0.0 21.731893395203315 0.0 33 5.668055970163353E-4 0.0 0.0 22.255621766846406 0.0 34 5.668055970163353E-4 0.0 0.0 22.80976870552938 0.0 35 5.668055970163353E-4 0.0 0.0 23.386587868093002 0.0 36 5.668055970163353E-4 0.0 0.0 23.84003234570607 0.0 37 5.668055970163353E-4 0.0 0.0 24.36432752294618 0.0 38 5.668055970163353E-4 0.0 0.0 24.908838766479874 0.0 39 5.668055970163353E-4 0.0 0.0 25.70123299110871 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGGC 20 7.0298323E-4 45.000004 12 TCGATGT 20 7.0298323E-4 45.000004 13 ACGATAG 35 1.2102646E-7 45.000004 1 GTTAAGC 20 7.0298323E-4 45.000004 17 GCGTATT 20 7.0298323E-4 45.000004 1 TCGTAAG 50 2.1827873E-11 45.0 1 CGTAAGG 110 0.0 45.0 2 TCACGAC 30 2.1632732E-6 44.999996 25 GTACGAG 30 2.1632732E-6 44.999996 1 CTACGAA 70 0.0 41.785717 11 CGAATAT 70 0.0 41.785717 14 TACGGGA 290 0.0 40.344826 4 ATAGCGG 45 1.9248546E-8 40.000004 2 GCGTAAG 45 1.9248546E-8 40.000004 1 CGTTTTT 870 0.0 39.827583 1 CACGACC 200 0.0 39.375 27 CGAAGTA 35 6.241902E-6 38.57143 3 ACGGGAT 205 0.0 38.414635 5 CTACGGG 160 0.0 37.968754 3 CGTTATT 125 0.0 37.800003 1 >>END_MODULE