##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935810.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 545573 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.010953621238585 33.0 31.0 34.0 30.0 34.0 2 32.116510531129656 33.0 31.0 34.0 30.0 34.0 3 32.0805318445011 33.0 31.0 34.0 30.0 34.0 4 35.71330692684572 37.0 35.0 37.0 33.0 37.0 5 31.956706068665422 37.0 35.0 37.0 0.0 37.0 6 33.779617026502414 37.0 35.0 37.0 17.0 37.0 7 35.47517380808801 37.0 35.0 37.0 32.0 37.0 8 35.74428353309273 37.0 35.0 37.0 35.0 37.0 9 37.6939163045092 39.0 37.0 39.0 35.0 39.0 10 37.28555298740957 39.0 37.0 39.0 34.0 39.0 11 37.216498983637386 39.0 37.0 39.0 34.0 39.0 12 37.03935312048067 39.0 37.0 39.0 34.0 39.0 13 36.90198745172507 39.0 37.0 39.0 33.0 39.0 14 37.825196628132254 40.0 37.0 41.0 33.0 41.0 15 38.052900345141715 40.0 37.0 41.0 33.0 41.0 16 38.09652603776213 40.0 37.0 41.0 33.0 41.0 17 38.12776292081903 40.0 37.0 41.0 33.0 41.0 18 38.08993663542734 40.0 37.0 41.0 34.0 41.0 19 37.95300720526859 40.0 36.0 41.0 33.0 41.0 20 38.01950426432393 40.0 36.0 41.0 33.0 41.0 21 37.93873047236575 40.0 36.0 41.0 33.0 41.0 22 38.05510903215519 40.0 36.0 41.0 34.0 41.0 23 38.08416288929254 40.0 36.0 41.0 34.0 41.0 24 38.051600794027564 40.0 36.0 41.0 34.0 41.0 25 37.79029937331943 40.0 35.0 41.0 33.0 41.0 26 37.84316122682024 40.0 36.0 41.0 34.0 41.0 27 37.81623907341456 40.0 35.0 41.0 34.0 41.0 28 37.7234650541724 40.0 35.0 41.0 33.0 41.0 29 37.68654240587419 40.0 35.0 41.0 33.0 41.0 30 37.50882466690984 40.0 35.0 41.0 33.0 41.0 31 37.44811418453626 40.0 35.0 41.0 33.0 41.0 32 37.38999730558514 40.0 35.0 41.0 33.0 41.0 33 37.35763866613634 40.0 35.0 41.0 33.0 41.0 34 37.22154872033624 40.0 35.0 41.0 32.0 41.0 35 37.21208527548101 40.0 35.0 41.0 32.0 41.0 36 37.098216004091114 39.0 35.0 41.0 32.0 41.0 37 37.00598270075682 39.0 35.0 41.0 32.0 41.0 38 36.850428815208964 39.0 35.0 41.0 31.0 41.0 39 36.77428501777031 39.0 35.0 41.0 31.0 41.0 40 36.68736905968587 39.0 35.0 41.0 31.0 41.0 41 36.54011103921932 39.0 35.0 41.0 31.0 41.0 42 36.5416085473438 39.0 35.0 41.0 31.0 41.0 43 36.47484021386689 39.0 35.0 41.0 31.0 41.0 44 36.414364347209265 39.0 35.0 41.0 31.0 41.0 45 36.391725763555016 38.0 35.0 41.0 31.0 41.0 46 36.30720728481798 38.0 35.0 40.0 31.0 41.0 47 36.19741812736334 38.0 35.0 40.0 31.0 41.0 48 36.13049582732283 38.0 35.0 40.0 31.0 41.0 49 36.0718144043052 38.0 35.0 40.0 31.0 41.0 50 35.927247132830985 38.0 35.0 40.0 30.0 41.0 51 34.863127390834954 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 13.0 9 38.0 10 20.0 11 14.0 12 10.0 13 19.0 14 14.0 15 29.0 16 33.0 17 77.0 18 144.0 19 253.0 20 488.0 21 769.0 22 1136.0 23 1668.0 24 2467.0 25 3091.0 26 4079.0 27 4726.0 28 5612.0 29 6747.0 30 8253.0 31 11077.0 32 15181.0 33 23059.0 34 40008.0 35 44144.0 36 43359.0 37 67676.0 38 106727.0 39 154537.0 40 100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.05561492229271 19.62743757480667 23.480634122289775 10.836313380610845 2 33.94889409849828 23.649447461659577 24.210875538195623 18.190782901646525 3 33.236432154817045 24.200061220038382 25.11377945756113 17.44972716758344 4 28.8643316293145 25.173166560661908 25.880129698500475 20.082372111523114 5 23.252800266875376 36.7069118156507 22.10446631339894 17.93582160407498 6 25.734411343669866 34.255544170990866 24.219673627543887 15.790370857795383 7 80.2257443091942 5.470945226395001 9.62565962758421 4.6776508368266025 8 81.03113607161644 5.258508027340063 8.682614425567248 5.027741475476242 9 75.80103854113015 6.072881172638675 10.892217906677933 7.233862379553241 10 42.423470369684715 23.62543600947994 18.254385755893345 15.696707864941997 11 33.43988797099563 24.5226578294747 22.869533499641662 19.167920699888008 12 29.314317240772546 21.89844438782711 28.356425262980387 20.430813108419954 13 27.369206320694023 22.649764559463172 30.708447815416086 19.272581304426723 14 21.83080907596234 25.817809898950276 31.305434836401364 21.045946188686024 15 21.098551431247515 23.514543424986208 34.198539883755245 21.188365260011036 16 26.146455194813527 23.825042661568663 29.428325815243788 20.60017632837402 17 25.61307102807507 23.237220316987827 27.76658668959058 23.383121965346525 18 27.643046851658713 22.098417626972008 29.297454236188376 20.961081285180903 19 25.59712449113134 25.690787483984728 26.326266145868654 22.385821879015275 20 25.772169810456163 27.32484928689653 26.938833116741478 19.96414778590583 21 24.531822505879138 26.925635982719086 29.382135846165408 19.160405665236365 22 22.938268572674968 22.98867429289939 29.97802310598215 24.09503402844349 23 22.219391355510627 26.528255613822534 28.987688173718272 22.264664856948567 24 23.17508381096572 25.886361678455494 28.322332666755866 22.616221843822917 25 23.922554818511912 26.156902925914586 26.49251337584521 23.428028879728284 26 23.118629404314365 25.056591876797423 27.05962355175201 24.765155167136204 27 23.925854102017514 24.042795372938176 28.012200017229596 24.019150507814718 28 20.97977722504596 26.628700467215204 27.62068504123188 24.770837266506955 29 24.140674116937603 26.39701744771094 26.31343559890244 23.148872836449016 30 26.52037399211471 24.57489648498001 27.358025415480604 21.54670410742467 31 26.230403630678207 25.748891532388885 25.779684845107802 22.24101999182511 32 26.94249898730326 26.897408779393405 24.409015842059635 21.7510763912437 33 26.682772058001405 24.58277810668783 24.434860229520154 24.299589605790608 34 22.83470772930479 26.330298603486607 28.81649201848332 22.018501648725287 35 23.685372993164986 28.113194751206528 26.106130618633987 22.0953016369945 36 27.015633105010693 27.894342278668482 23.83475721855737 21.255267397763454 37 23.399801676402607 28.792663859831773 25.942449498050674 21.865084965714946 38 23.74329374804105 29.372054702120522 23.87673143648971 23.007920113348717 39 23.82522595509675 24.920588078955518 25.10754747760611 26.146638488341615 40 25.473034772615215 23.409516233391315 28.295388518126813 22.822060475866657 41 23.17490051743763 24.91417280547241 26.246900048206196 25.66402662888376 42 24.665810074912066 24.585160922552983 27.469651174086696 23.279377828448254 43 24.641248742148164 24.357876947722854 27.065488944650852 23.93538536547813 44 24.30857098866696 23.863900889523492 27.290023516559653 24.537504605249893 45 22.87576547959668 23.78801736889472 26.33469764816074 27.001519503347854 46 23.969294668174562 24.6914711688445 26.935167246179702 24.404066916801234 47 21.26608171592069 26.142972617779836 29.263178346435765 23.327767319863703 48 22.39590302306016 27.16776673332441 26.859283725550938 23.577046518064492 49 24.697886442327608 24.33496525671175 28.205757982891384 22.76139031806926 50 22.327717830611117 24.59377571837316 27.715814382309972 25.362692068705744 51 22.14130831254479 24.424412498419095 25.56358177549109 27.870697413545027 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 208.0 1 506.5 2 805.0 3 1637.0 4 2469.0 5 1651.5 6 834.0 7 832.0 8 830.0 9 836.5 10 843.0 11 879.5 12 916.0 13 870.5 14 825.0 15 846.5 16 868.0 17 857.0 18 846.0 19 934.5 20 1023.0 21 1153.0 22 1283.0 23 1383.5 24 1484.0 25 1795.5 26 2372.5 27 2638.0 28 3644.5 29 4651.0 30 5329.5 31 6008.0 32 6925.0 33 7842.0 34 9026.5 35 10211.0 36 11393.0 37 12575.0 38 14268.0 39 15961.0 40 17676.0 41 19391.0 42 22335.0 43 25279.0 44 28998.5 45 32718.0 46 41020.5 47 49323.0 48 52330.0 49 55337.0 50 56852.5 51 58368.0 52 53372.5 53 48377.0 54 43556.0 55 38735.0 56 35853.5 57 32972.0 58 30729.0 59 28486.0 60 25568.5 61 22651.0 62 19974.0 63 17297.0 64 14649.5 65 12002.0 66 10660.5 67 9319.0 68 8107.0 69 6895.0 70 5932.0 71 4969.0 72 4295.0 73 3621.0 74 2956.0 75 1822.5 76 1354.0 77 938.0 78 522.0 79 397.5 80 273.0 81 195.0 82 117.0 83 68.5 84 20.0 85 17.0 86 14.0 87 10.0 88 6.0 89 5.0 90 4.0 91 2.5 92 1.0 93 2.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 545573.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.94004158461883 #Duplication Level Percentage of deduplicated Percentage of total 1 71.36540740927161 24.93510302583215 2 10.926184660547369 7.6352269280149905 3 4.277074852592452 4.483235196303232 4 2.3579503697641466 3.2954753589610655 5 1.4591384265761531 2.549117865114304 6 0.9984170411452171 2.0930839761843587 7 0.7721087082674943 1.888425726229881 8 0.6543907194328308 1.8291551159657395 9 0.567986429273444 1.7860922512481965 >10 6.504173526496427 43.458840594620426 >50 0.0756265256448618 1.8280900122501604 >100 0.03674810048939965 2.2369167383201263 >500 0.0015977434995391154 0.41961960277114085 >1k 0.0031954869990782307 1.561617608184219 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 1759 0.32241331590822864 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTC 1595 0.29235317730166266 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGC 1416 0.2595436357737645 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCG 1299 0.2380982929873729 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1270 0.23278278067279723 No Hit CCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 1053 0.193008085077524 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 888 0.16276465294286924 No Hit CTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGCT 837 0.1534166830103396 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.498805842664501E-4 0.0 0.0 0.15946536943727055 0.0 2 5.498805842664501E-4 0.0 0.0 0.8486490350512214 0.0 3 5.498805842664501E-4 0.0 0.0 1.1596981522179433 0.0 4 5.498805842664501E-4 0.0 0.0 1.590071356170485 0.0 5 5.498805842664501E-4 0.0 0.0 2.9215155442076495 0.0 6 5.498805842664501E-4 0.0 0.0 3.7826285391689103 0.0 7 5.498805842664501E-4 0.0 0.0 4.61606421138876 0.0 8 5.498805842664501E-4 0.0 0.0 5.979401473313379 0.0 9 5.498805842664501E-4 0.0 0.0 6.547428116860622 0.0 10 5.498805842664501E-4 0.0 0.0 7.900317647684178 0.0 11 5.498805842664501E-4 0.0 0.0 9.349436280754363 0.0 12 5.498805842664501E-4 0.0 0.0 10.72377115436431 0.0 13 5.498805842664501E-4 0.0 0.0 11.247990644698326 0.0 14 5.498805842664501E-4 0.0 0.0 11.494887027033963 0.0 15 5.498805842664501E-4 0.0 0.0 11.89025116712154 0.0 16 5.498805842664501E-4 0.0 0.0 12.560555599342344 0.0 17 5.498805842664501E-4 0.0 0.0 13.342852377225412 0.0 18 5.498805842664501E-4 0.0 0.0 14.196450337535031 0.0 19 5.498805842664501E-4 0.0 0.0 14.760077936408143 0.0 20 7.331741123552669E-4 0.0 0.0 15.30281007307913 0.0 21 7.331741123552669E-4 0.0 0.0 15.943970834333811 0.0 22 7.331741123552669E-4 0.0 0.0 16.625089584711855 0.0 23 7.331741123552669E-4 0.0 0.0 17.28586275347204 0.0 24 7.331741123552669E-4 0.0 0.0 17.82016338785094 0.0 25 7.331741123552669E-4 0.0 0.0 18.294710332072885 0.0 26 7.331741123552669E-4 0.0 0.0 18.767424341013943 0.0 27 7.331741123552669E-4 0.0 0.0 19.30355791067373 0.0 28 7.331741123552669E-4 0.0 0.0 19.786536357187764 0.0 29 7.331741123552669E-4 0.0 0.0 20.321020285094754 0.0 30 7.331741123552669E-4 0.0 0.0 21.013136647158124 0.0 31 7.331741123552669E-4 0.0 0.0 21.515177620593395 0.0 32 7.331741123552669E-4 0.0 0.0 22.028949379826347 0.0 33 7.331741123552669E-4 0.0 0.0 22.55720132777832 0.0 34 9.164676404440835E-4 0.0 0.0 23.105798857348145 0.0 35 9.164676404440835E-4 0.0 0.0 23.706451748895198 0.0 36 0.0010997611685329002 0.0 0.0 24.207392961161933 0.0 37 0.001283054696621717 0.0 0.0 24.73472844147346 0.0 38 0.001283054696621717 0.0 0.0 25.366357939267523 0.0 39 0.001283054696621717 0.0 0.0 26.390052293643564 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 2.1633969E-6 45.000004 4 GAATCGC 30 2.1633969E-6 45.000004 17 CTATGCG 20 7.0300244E-4 45.0 1 TAGCCCG 20 7.0300244E-4 45.0 1 TCTCGTT 20 7.0300244E-4 45.0 20 TATTCGG 50 2.1827873E-11 45.0 1 TGTTACG 25 3.8881015E-5 45.0 1 TTAACGG 20 7.0300244E-4 45.0 2 CGAAAGG 90 0.0 42.5 2 GGCGATT 170 0.0 41.02941 8 AACACGT 205 0.0 40.60976 41 CACGACC 220 0.0 39.886364 27 AAACACG 210 0.0 39.642857 40 CGTTTTT 655 0.0 39.503815 1 TACGAAT 40 3.4537698E-7 39.375 12 GCGATTA 40 3.4537698E-7 39.375 9 TAACGGG 155 0.0 39.193546 3 AACGGGC 115 0.0 39.130432 4 ACGACCA 220 0.0 38.863636 28 TCCGACG 35 6.242255E-6 38.571426 26 >>END_MODULE