##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935809.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 755110 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.9864099270305 33.0 31.0 34.0 30.0 34.0 2 32.15710029002397 33.0 31.0 34.0 30.0 34.0 3 31.95478274688456 33.0 31.0 34.0 30.0 34.0 4 35.69418098025453 37.0 35.0 37.0 33.0 37.0 5 32.06654792017057 37.0 35.0 37.0 0.0 37.0 6 33.85557865741415 37.0 35.0 37.0 17.0 37.0 7 35.49868363549682 37.0 35.0 37.0 32.0 37.0 8 35.75503171723325 37.0 35.0 37.0 35.0 37.0 9 37.72734700904504 39.0 38.0 39.0 35.0 39.0 10 37.40384182436996 39.0 37.0 39.0 34.0 39.0 11 37.3541921044616 39.0 37.0 39.0 34.0 39.0 12 37.411483095178184 39.0 37.0 39.0 35.0 39.0 13 37.44203890823854 39.0 37.0 39.0 35.0 39.0 14 38.75079392406404 40.0 38.0 41.0 35.0 41.0 15 38.83693501609037 40.0 38.0 41.0 35.0 41.0 16 38.760571307491624 40.0 38.0 41.0 35.0 41.0 17 38.722455006555336 40.0 38.0 41.0 35.0 41.0 18 38.46626186913165 40.0 38.0 41.0 34.0 41.0 19 38.18073790573559 40.0 37.0 41.0 34.0 41.0 20 38.04794268384739 40.0 36.0 41.0 34.0 41.0 21 37.97815285190237 40.0 36.0 41.0 34.0 41.0 22 38.02615380540583 40.0 35.0 41.0 34.0 41.0 23 38.01583080610772 40.0 35.0 41.0 34.0 41.0 24 37.97372568235092 40.0 35.0 41.0 34.0 41.0 25 37.72247884414191 40.0 35.0 41.0 33.0 41.0 26 37.75437221067129 40.0 35.0 41.0 34.0 41.0 27 37.71635523301241 40.0 35.0 41.0 34.0 41.0 28 37.6154374859292 40.0 35.0 41.0 33.0 41.0 29 37.53183774549404 40.0 35.0 41.0 33.0 41.0 30 37.23774416972362 40.0 35.0 41.0 33.0 41.0 31 37.03829110990452 39.0 35.0 41.0 32.0 41.0 32 36.672222590086214 39.0 35.0 41.0 31.0 41.0 33 36.24253022738409 40.0 35.0 41.0 29.0 41.0 34 35.85733072002755 40.0 35.0 41.0 25.0 41.0 35 35.62211465879143 40.0 35.0 41.0 23.0 41.0 36 35.43078094582246 39.0 35.0 41.0 22.0 41.0 37 35.35072903285614 39.0 35.0 41.0 21.0 41.0 38 35.2118154970799 39.0 35.0 41.0 21.0 41.0 39 35.114019149527884 39.0 35.0 41.0 20.0 41.0 40 35.043168544980205 39.0 35.0 41.0 20.0 41.0 41 34.904725139383665 39.0 35.0 41.0 18.0 41.0 42 34.865904305333 39.0 35.0 41.0 18.0 41.0 43 34.81103680258505 39.0 35.0 41.0 18.0 41.0 44 34.77076452437393 39.0 35.0 41.0 18.0 41.0 45 34.764358835136605 39.0 35.0 41.0 18.0 41.0 46 34.62610613023268 39.0 35.0 41.0 18.0 41.0 47 34.51652077180808 39.0 34.0 41.0 18.0 41.0 48 34.44844989471733 39.0 34.0 41.0 18.0 41.0 49 34.40524162042616 39.0 34.0 41.0 18.0 41.0 50 34.319778575306906 38.0 34.0 41.0 18.0 41.0 51 33.30730886890652 37.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 9.0 9 23.0 10 30.0 11 17.0 12 16.0 13 18.0 14 15.0 15 36.0 16 74.0 17 117.0 18 259.0 19 632.0 20 1054.0 21 1798.0 22 2796.0 23 4493.0 24 7230.0 25 12305.0 26 16842.0 27 18158.0 28 16117.0 29 14133.0 30 14000.0 31 15072.0 32 17946.0 33 23270.0 34 36025.0 35 46824.0 36 52967.0 37 79762.0 38 137232.0 39 235659.0 40 179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.624703685555744 17.39163830435301 21.007667757015533 22.97599025307571 2 41.77974070003046 22.312245897948642 21.150560845439735 14.75745255658116 3 27.56499053118089 22.80396233661321 35.18864801154798 14.442399120657917 4 23.74488485121373 22.11161287759399 37.39640582166837 16.74709644952391 5 21.27531088185827 33.204433791103284 30.301545470196395 15.21870985684205 6 22.220338758591463 30.437949437830248 33.57497583133583 13.766735972242456 7 70.06701010448809 4.452596310471322 21.119836844962986 4.360556740077605 8 71.28762696825628 4.925772404020607 19.366317490166995 4.420283137556118 9 65.38292434214883 6.111162612069765 21.108845068930354 7.397067976851054 10 31.513951609699248 27.749202103004862 27.431367615314322 13.305478671981566 11 22.243116896875954 22.203917310060785 38.14027095390075 17.41269483916251 12 20.26115400405239 20.065023638940023 40.19083312365086 19.48298923335673 13 20.368158281574868 20.68400630371734 41.83152123531671 17.116314179391082 14 17.494802081815894 24.52424150123823 39.334401610361404 18.64655480658447 15 16.71173736276834 24.57946524347446 41.21147912224709 17.497318271510114 16 19.769437565387822 24.922196766034087 37.47983737468713 17.828528293890955 17 19.639787580617394 24.878891817086252 36.959780694203495 18.52153990809286 18 19.687462753770973 24.220312272384156 37.23431023294619 18.857914740898675 19 18.620333461350004 26.239090993365206 35.83981141820397 19.30076412708082 20 19.720570512905404 25.66010250162228 36.386089443922074 18.23323754155024 21 19.83035584219518 26.043622783435527 37.14518414535631 16.98083722901299 22 19.33983128285945 22.772443749917233 37.36263590735125 20.52508905987207 23 18.26687502483082 24.790427884679055 37.47189151249487 19.47080557799526 24 18.586298684959807 23.990676855027747 37.64497887724968 19.778045582762775 25 19.206340798029427 26.60645468872085 35.170107666432706 19.01709684681702 26 19.186608573585307 24.860219040934435 35.87702453947107 20.07614784600919 27 20.2734700904504 24.108143184436702 35.72419912330654 19.894187601806358 28 19.2729536094079 24.483055448875 36.54924448093656 19.69474646078055 29 21.17903351829535 22.936260942114394 35.47403689528678 20.410668644303477 30 21.301532227092743 23.26972229211638 36.133808319317716 19.294937161473165 31 22.293308259723748 23.062467719934844 34.83254095429805 19.811683066043358 32 22.693779714213825 23.89665081908596 33.83877845611898 19.57079101058124 33 21.142614983247473 25.23314483982466 32.95956880454503 20.66467137238283 34 22.2948974321622 25.593357259207266 32.780522043146036 19.3312232654845 35 21.111228827588032 25.57071155195932 33.57153262438585 19.746526996066798 36 21.303518692640807 27.896200553561734 31.902106977791316 18.898173776006143 37 20.66758485518666 27.169419025042707 32.77774099137874 19.38525512839189 38 20.534756525539326 26.929321555799817 32.515395107997506 20.02052681066335 39 21.531697368595303 26.426613341102623 31.023691912436597 21.017997377865477 40 21.483757333368647 25.351538186489385 33.45155010528267 19.713154374859293 41 20.12912026062428 26.903894796784574 32.53380302207625 20.433181920514894 42 20.767437856736105 26.38781104739707 33.19198527366874 19.65276582219809 43 21.050575412853757 25.89649190184212 32.39938551999047 20.65354716531366 44 20.946219756062032 25.868019228986505 31.384036762855743 21.801724252095724 45 20.653414734277124 24.40094820622161 31.600296645521848 23.34534041397942 46 21.870191097985725 25.096608441154267 30.95164942856008 22.081551032299927 47 20.52442690468938 24.880480989524706 33.41049648395598 21.18459562182993 48 20.420733403080344 24.505303863013335 32.900901855358825 22.173060878547496 49 20.345909867436532 23.91201281932434 33.9480340612626 21.794043251976532 50 19.729178530280358 23.69323674696402 34.67680205532969 21.90078266742594 51 19.593304286792655 23.184436704586087 33.32110553429302 23.901153474328243 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 233.0 1 463.0 2 693.0 3 13691.0 4 26689.0 5 17890.5 6 9092.0 7 8997.5 8 8903.0 9 8710.5 10 8518.0 11 8359.5 12 8201.0 13 7850.5 14 7500.0 15 7236.5 16 6973.0 17 6489.0 18 6005.0 19 5728.0 20 5451.0 21 5220.0 22 4989.0 23 5186.5 24 5384.0 25 5911.0 26 7053.5 27 7669.0 28 8921.5 29 10174.0 30 11623.0 31 13072.0 32 15172.0 33 17272.0 34 18797.5 35 20323.0 36 22940.5 37 25558.0 38 27597.5 39 29637.0 40 31264.0 41 32891.0 42 35591.0 43 38291.0 44 42617.5 45 46944.0 46 61857.5 47 76771.0 48 73273.0 49 69775.0 50 68197.5 51 66620.0 52 58001.0 53 49382.0 54 43521.5 55 37661.0 56 33410.5 57 29160.0 58 26297.0 59 23434.0 60 20730.5 61 18027.0 62 15558.0 63 13089.0 64 10990.5 65 8892.0 66 7328.5 67 5765.0 68 4690.0 69 3615.0 70 2964.5 71 2314.0 72 2001.5 73 1689.0 74 1340.0 75 755.5 76 520.0 77 404.5 78 289.0 79 200.5 80 112.0 81 83.5 82 55.0 83 42.0 84 29.0 85 20.5 86 12.0 87 9.5 88 7.0 89 3.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 755110.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.54719787875118 #Duplication Level Percentage of deduplicated Percentage of total 1 73.94401320324108 31.46110561707289 2 9.516511635195169 8.098018073161736 3 4.116538775097535 5.254415695188804 4 2.4663143951794066 4.19739066411643 5 1.8142152159420495 3.859488689366384 6 1.3531702830279015 3.4544162277380317 7 1.1168730326131922 3.3263872546824085 8 0.9177023283687221 3.123653004711577 9 0.7346237270445539 2.8130562972891298 >10 3.96109792808134 25.5661277599307 >50 0.03573990984989506 1.0218918567107194 >100 0.016302397982101403 1.1459425081270112 >500 0.0025080612280037624 0.8063348226757425 >1k 0.003762091842005643 3.0747434239038114 >5k 3.135076535004703E-4 0.8342130655110161 >10k+ 3.135076535004703E-4 1.962815039813656 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14715 1.9487227026525937 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTC 6254 0.8282237025069195 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTT 3034 0.40179576485545154 No Hit CGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTG 2314 0.306445418548291 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTC 2180 0.2886996596522361 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCG 2112 0.27969434916767094 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGC 2107 0.2790321939849823 No Hit GAACTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCT 2076 0.27492683185231287 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCT 2018 0.267245831733125 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1667 0.22076253790838418 No Hit GCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1609 0.21308153778919628 TruSeq Adapter, Index 15 (95% over 23bp) CGTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCT 1502 0.19891141687965994 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTT 1222 0.16183072664909748 No Hit CCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1210 0.16024155421064482 TruSeq Adapter, Index 15 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGCT 945 0.12514732952814822 TruSeq Adapter, Index 14 (95% over 22bp) CGTTTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTC 911 0.12064467428586564 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCC 898 0.11892307081087523 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGT 811 0.10740157063209334 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6486207307544596E-4 0.0 0.0 0.13084186409927032 0.0 2 2.6486207307544596E-4 0.0 0.0 0.573161526135265 0.0 3 2.6486207307544596E-4 0.0 0.0 1.0525618784018222 0.0 4 2.6486207307544596E-4 0.0 0.0 1.7682191998516772 0.0 5 2.6486207307544596E-4 0.0 0.0 3.528095244401478 0.0 6 2.6486207307544596E-4 0.0 0.0 5.28439565096476 0.0 7 2.6486207307544596E-4 0.0 0.0 6.50289361814835 0.0 8 2.6486207307544596E-4 0.0 0.0 7.95685396829601 0.0 9 2.6486207307544596E-4 0.0 0.0 8.807326084941266 0.0 10 2.6486207307544596E-4 0.0 0.0 10.129782415806968 0.0 11 2.6486207307544596E-4 0.0 0.0 11.108712637893817 0.0 12 2.6486207307544596E-4 0.0 0.0 12.228019758710651 0.0 13 2.6486207307544596E-4 0.0 0.0 12.783965250096012 0.0 14 2.6486207307544596E-4 0.0 0.0 13.121664393267206 0.0 15 2.6486207307544596E-4 0.0 0.0 13.43963131199428 0.0 16 2.6486207307544596E-4 0.0 0.0 13.842354094105495 0.0 17 2.6486207307544596E-4 0.0 0.0 14.298446583941413 0.0 18 2.6486207307544596E-4 0.0 0.0 14.776390194806055 0.0 19 2.6486207307544596E-4 0.0 0.0 15.186264252890307 0.0 20 2.6486207307544596E-4 0.0 0.0 15.539325396299876 0.0 21 2.6486207307544596E-4 0.0 0.0 15.92880507475732 0.0 22 3.972931096131689E-4 0.0 0.0 16.374567943743294 0.0 23 3.972931096131689E-4 0.0 0.0 16.799009415846697 0.0 24 3.972931096131689E-4 0.0 0.0 17.156705645535087 0.0 25 3.972931096131689E-4 0.0 0.0 17.500099323277404 0.0 26 3.972931096131689E-4 0.0 0.0 17.833428242242853 0.0 27 3.972931096131689E-4 0.0 0.0 18.192051489187005 0.0 28 3.972931096131689E-4 0.0 0.0 18.550012580948472 0.0 29 3.972931096131689E-4 0.0 0.0 18.91896544874257 0.0 30 3.972931096131689E-4 0.0 0.0 19.379825455893844 0.0 31 3.972931096131689E-4 0.0 0.0 19.782415806968523 0.0 32 3.972931096131689E-4 0.0 0.0 20.181298089020142 0.0 33 3.972931096131689E-4 0.0 0.0 20.578193905523698 0.0 34 3.972931096131689E-4 0.0 0.0 20.955887221729284 0.0 35 3.972931096131689E-4 0.0 0.0 21.332918382752183 0.0 36 3.972931096131689E-4 0.0 0.0 21.71511435420005 0.0 37 5.297241461508919E-4 0.0 0.0 22.106845360278633 0.0 38 6.621551826886149E-4 0.0 0.0 22.510362728609078 0.0 39 6.621551826886149E-4 0.0 0.0 22.930698838579808 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGT 25 3.8895305E-5 45.0 28 TTCCGCG 25 3.8895305E-5 45.0 1 CCGACGG 25 3.8895305E-5 45.0 2 CGTTTTT 8820 0.0 44.285713 1 CGTTATT 980 0.0 42.933674 1 GCTACGA 60 3.6379788E-12 41.250004 10 CGTTACT 45 1.9268555E-8 40.0 1 GCTAGCG 45 1.9268555E-8 40.0 1 TGTAACG 40 3.4561162E-7 39.375 1 GTTATTT 1090 0.0 38.600918 2 GTATGCG 35 6.2454437E-6 38.571426 1 CGAATAT 65 9.094947E-12 38.076927 14 TACGGGA 320 0.0 37.96875 4 GACGTAG 30 1.1395509E-4 37.500004 1 AAGCGCG 30 1.1395509E-4 37.500004 1 TACGAAG 60 1.546141E-10 37.500004 1 GTTTTTT 10490 0.0 37.385605 2 CGAAAGG 85 0.0 37.058823 2 GTTACGG 85 0.0 37.058823 2 GGCCGAT 80 0.0 36.5625 8 >>END_MODULE