##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935808.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 982575 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.002240032567485 33.0 31.0 34.0 30.0 34.0 2 32.162321451288705 33.0 31.0 34.0 30.0 34.0 3 31.98044220542961 33.0 31.0 34.0 30.0 34.0 4 35.70950716230313 37.0 35.0 37.0 33.0 37.0 5 32.065217413429004 37.0 35.0 37.0 0.0 37.0 6 33.85390428211587 37.0 35.0 37.0 17.0 37.0 7 35.50368368826807 37.0 35.0 37.0 32.0 37.0 8 35.76628450754395 37.0 35.0 37.0 35.0 37.0 9 37.722057858178765 39.0 37.0 39.0 35.0 39.0 10 37.384701422283285 39.0 37.0 39.0 34.0 39.0 11 37.386973004605245 39.0 37.0 39.0 35.0 39.0 12 37.322092461135284 39.0 37.0 39.0 34.0 39.0 13 37.286207159758796 39.0 37.0 39.0 34.0 39.0 14 38.442348930107116 40.0 38.0 41.0 34.0 41.0 15 38.578977686181716 40.0 38.0 41.0 34.0 41.0 16 38.5326219372567 40.0 38.0 41.0 34.0 41.0 17 38.52135867491031 40.0 38.0 41.0 34.0 41.0 18 38.3002946339974 40.0 38.0 41.0 34.0 41.0 19 38.031137572195505 40.0 37.0 41.0 34.0 41.0 20 37.96895300613185 40.0 35.0 41.0 34.0 41.0 21 37.8408426837646 40.0 35.0 41.0 34.0 41.0 22 37.912509477648015 40.0 35.0 41.0 34.0 41.0 23 37.919159351703435 40.0 35.0 41.0 34.0 41.0 24 37.87085464213928 40.0 35.0 41.0 34.0 41.0 25 37.61132025545124 39.0 35.0 41.0 33.0 41.0 26 37.64086710938096 39.0 35.0 41.0 33.0 41.0 27 37.62533038190469 40.0 35.0 41.0 33.0 41.0 28 37.527794824822536 39.0 35.0 41.0 33.0 41.0 29 37.443508129150445 39.0 35.0 41.0 33.0 41.0 30 37.180407602473096 39.0 35.0 41.0 33.0 41.0 31 36.99396789049182 39.0 35.0 41.0 32.0 41.0 32 36.7141073200519 39.0 35.0 41.0 31.0 41.0 33 36.37631834719996 39.0 35.0 41.0 30.0 41.0 34 36.02458743607358 39.0 35.0 41.0 29.0 41.0 35 35.82403480650332 39.0 35.0 41.0 26.0 41.0 36 35.63939648372898 39.0 35.0 41.0 25.0 41.0 37 35.53069638449991 39.0 35.0 41.0 24.0 41.0 38 35.356537668880236 39.0 35.0 41.0 23.0 41.0 39 35.25598147724092 39.0 35.0 41.0 23.0 41.0 40 35.15563799201079 39.0 35.0 41.0 23.0 41.0 41 35.01686588810014 38.0 35.0 41.0 23.0 41.0 42 34.98086761824797 38.0 35.0 41.0 23.0 41.0 43 34.90576800753123 38.0 35.0 41.0 22.0 41.0 44 34.83096455741292 38.0 35.0 41.0 22.0 41.0 45 34.79098592982724 38.0 34.0 40.0 23.0 41.0 46 34.67661806986744 38.0 34.0 40.0 22.0 41.0 47 34.59855176449635 38.0 34.0 40.0 22.0 41.0 48 34.533960257486704 38.0 34.0 40.0 22.0 41.0 49 34.485760374526116 38.0 34.0 40.0 21.0 41.0 50 34.37520087525125 37.0 34.0 40.0 20.0 41.0 51 33.39231101951505 36.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 16.0 9 33.0 10 41.0 11 28.0 12 18.0 13 29.0 14 41.0 15 47.0 16 100.0 17 183.0 18 378.0 19 745.0 20 1250.0 21 1898.0 22 3107.0 23 4782.0 24 8212.0 25 13389.0 26 18807.0 27 20472.0 28 19510.0 29 18018.0 30 17929.0 31 20562.0 32 25571.0 33 35794.0 34 58007.0 35 70276.0 36 77070.0 37 113802.0 38 181003.0 39 271273.0 40 181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.03757982851182 17.884130982367758 20.255654784622042 20.822634404498384 2 42.05012340024935 20.688904154899117 21.184744167111923 16.076228277739613 3 30.091036307660996 21.587665063735592 33.2182276162125 15.103071012390911 4 25.230440424395084 23.29867949011526 33.32152761875683 18.149352466732818 5 21.118896776327507 34.23697936544284 28.639136961555096 16.004986896674552 6 23.065618400630996 30.656591099916035 31.796453196956975 14.481337302495993 7 71.60125181283871 5.0294379563900975 18.26873266671755 5.100577564053634 8 72.56596188586113 4.728697554894028 17.984784876472535 4.720555682772307 9 67.02205938477978 5.716815510266391 20.21860926646821 7.042515838485612 10 34.97147800422359 23.362287866066204 26.654962725491693 15.011271404218506 11 28.08935704653589 23.10765081545938 31.35557082156578 17.44742131643895 12 23.614685901839554 21.10302012569015 34.89616568709767 20.386128285372617 13 23.151922245121238 20.655827799404626 37.34157697885658 18.85067297661756 14 19.53174057959952 23.020532783756963 37.818894231992466 19.628832404651046 15 19.311197618502405 22.57201740325166 38.93209169783477 19.184693280411164 16 23.436582449176907 23.423046586774547 35.10429229320917 18.036078670839377 17 22.469328041116455 23.609393684960438 34.26323690303539 19.65804137088772 18 23.81416176882172 22.610589522428313 34.57608833931252 18.999160369437448 19 21.536065949164186 25.65056102587589 32.766964353866115 20.04640867109381 20 22.910515736712213 25.478462203903007 32.93173549092945 18.679286568455332 21 21.993232068798818 26.48367809073099 34.01826832557311 17.50482151489708 22 22.11220517517747 22.22334172963896 34.68498587894054 20.979467216243037 23 20.306541485382795 25.614940335343356 34.52744065338524 19.55107752588861 24 20.52810218049513 24.009668473144544 34.88151031727858 20.58071902908175 25 22.094598376714245 25.122865938986845 32.611556369742765 20.17097931455614 26 21.30799175635448 23.729689845558863 33.30178357886167 21.660534819224996 27 21.920667633513983 22.52357326412742 33.54288476706613 22.01287433529247 28 20.339414294074242 24.170266900745492 33.12591914103249 22.364399664147776 29 22.50474518484594 23.85446403582424 32.33432562399817 21.306465155331654 30 23.7776251176755 21.868457878533444 33.90937078594509 20.444546217845964 31 23.253899193445793 22.334783604305013 32.70070986947562 21.71060733277358 32 24.721878736992085 22.965778693738393 31.5936188077246 20.718723761544922 33 23.326870722336718 22.610080655420706 31.965397043482685 22.09765157875989 34 21.827443197720275 24.684833218838257 33.13792840241203 20.349795181029435 35 22.004427142966186 26.932295244637817 31.681551026639188 19.381726585756812 36 23.181334758160954 27.735796249650154 29.263007912881967 19.81986107930692 37 23.024705493219347 27.171768058417932 29.250591557896342 20.552934890466375 38 22.542808437014987 27.021245197567616 29.81136300027988 20.62458336513752 39 23.567463043533575 25.0767625880976 29.02333155229881 22.33244281607002 40 24.572882477164594 24.437625626542502 31.227031015444112 19.76246088084879 41 21.88779482482253 25.69727501717426 30.17164084166603 22.243289316337176 42 23.05442332646363 25.209475103681655 30.625244892247412 21.110856677607305 43 22.786250413454443 24.30094394829911 30.93198992443325 21.980815713813197 44 23.732335953998422 23.7776251176755 29.91049029336183 22.579548634964254 45 22.331933949062414 23.338879983716257 30.12787827901178 24.20130778820955 46 22.38495789125512 24.107370938605197 29.73747551077526 23.770195659364425 47 21.71121797318271 24.384092817342186 31.54700658982775 22.357682619647353 48 21.34381599369005 24.55039055542834 31.279138997023125 22.826654453858485 49 22.694247258479 23.536015062463424 31.0552375136758 22.714500165381775 50 20.334936264407297 23.943821082360124 32.782026817291296 22.939215835941276 51 20.984148792713025 22.801923517288756 31.257257715696003 24.95666997430222 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 329.0 1 704.0 2 1079.0 3 16814.5 4 32550.0 5 21016.0 6 9482.0 7 9199.0 8 8916.0 9 8943.0 10 8970.0 11 8791.0 12 8612.0 13 8393.5 14 8175.0 15 7645.0 16 7115.0 17 6735.5 18 6356.0 19 6064.0 20 5772.0 21 5598.0 22 5424.0 23 5536.0 24 5648.0 25 5959.5 26 6855.5 27 7440.0 28 8412.0 29 9384.0 30 11066.0 31 12748.0 32 14441.5 33 16135.0 34 18410.5 35 20686.0 36 22184.5 37 23683.0 38 26908.0 39 30133.0 40 32059.5 41 33986.0 42 37340.5 43 40695.0 44 46286.5 45 51878.0 46 67460.0 47 83042.0 48 86638.5 49 90235.0 50 90055.0 51 89875.0 52 82080.0 53 74285.0 54 67772.5 55 61260.0 56 55425.5 57 49591.0 58 45498.0 59 41405.0 60 37587.0 61 33769.0 62 31046.5 63 28324.0 64 25261.0 65 22198.0 66 19112.0 67 16026.0 68 13400.0 69 10774.0 70 8910.0 71 7046.0 72 6162.5 73 5279.0 74 4431.5 75 3003.0 76 2422.0 77 1778.0 78 1134.0 79 799.0 80 464.0 81 342.5 82 221.0 83 149.5 84 78.0 85 69.5 86 61.0 87 39.5 88 18.0 89 12.0 90 6.0 91 7.0 92 8.0 93 5.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 982575.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.92288330875904 #Duplication Level Percentage of deduplicated Percentage of total 1 72.6736789384196 28.286691249383257 2 9.550391928210757 7.434575811493232 3 4.222733590502383 4.930829003613041 4 2.4820733290338293 3.8643780219906736 5 1.7058748019510999 3.319878292784755 6 1.340853385881201 3.1313927923685063 7 1.0816221696155557 2.9469897444479134 8 0.9136029851231442 2.8448049904385657 9 0.8093321181370761 2.835138563305218 >10 5.12836732867465 31.54360167315577 >50 0.054934964931452314 1.4364908205648375 >100 0.030489189246258885 2.2064940748090907 >500 0.002365540541587139 0.7122409002386395 >1k 0.0034168918934036454 2.571105760528223 >5k 0.0 0.0 >10k+ 2.628378379541266E-4 1.9353883008782793 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18918 1.9253492099839706 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTT 3877 0.3945754776989034 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC 3096 0.31509045111060224 No Hit CGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG 2810 0.2859832582754497 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC 2656 0.2703101544411368 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCT 2232 0.22715823219601558 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2161 0.2199323206879882 No Hit CGTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCT 1600 0.16283744243441978 No Hit GCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 1286 0.13088059435666488 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCG 1130 0.11500394371930896 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTC 1094 0.1113401012645345 No Hit CCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 1082 0.11011882044627637 No Hit CTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGCT 1071 0.10899931302953973 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGC 1037 0.10553901737780831 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCC 990 0.10075566750629722 No Hit GAACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCT 983 0.10004325369564664 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.0709360608604943E-4 0.0 0.0 0.1153092639238735 0.0 2 4.0709360608604943E-4 0.0 0.0 0.40933262091952266 0.0 3 4.0709360608604943E-4 0.0 0.0 0.8508256367198432 0.0 4 4.0709360608604943E-4 0.0 0.0 1.3343510673485484 0.0 5 5.088670076075618E-4 0.0 0.0 2.5996997684655114 0.0 6 5.088670076075618E-4 0.0 0.0 4.296669465435208 0.0 7 5.088670076075618E-4 0.0 0.0 5.4977991501920975 0.0 8 5.088670076075618E-4 0.0 0.0 7.0830216522911735 0.0 9 5.088670076075618E-4 0.0 0.0 8.080808080808081 0.0 10 5.088670076075618E-4 0.0 0.0 9.488232450449075 0.0 11 6.106404091290741E-4 0.0 0.0 10.59420400478335 0.0 12 6.106404091290741E-4 0.0 0.0 11.531333485993436 0.0 13 6.106404091290741E-4 0.0 0.0 12.094445716611963 0.0 14 6.106404091290741E-4 0.0 0.0 12.48525557845457 0.0 15 6.106404091290741E-4 0.0 0.0 12.824873419331858 0.0 16 6.106404091290741E-4 0.0 0.0 13.205098847416227 0.0 17 6.106404091290741E-4 0.0 0.0 13.610258758873368 0.0 18 6.106404091290741E-4 0.0 0.0 14.049309213037173 0.0 19 6.106404091290741E-4 0.0 0.0 14.371014935246674 0.0 20 7.124138106505864E-4 0.0 0.0 14.709411495305702 0.0 21 7.124138106505864E-4 0.0 0.0 15.080680864056179 0.0 22 8.141872121720989E-4 0.0 0.0 15.486146095717885 0.0 23 8.141872121720989E-4 0.0 0.0 15.889982952955245 0.0 24 8.141872121720989E-4 0.0 0.0 16.227056458794493 0.0 25 8.141872121720989E-4 0.0 0.0 16.579090654657406 0.0 26 8.141872121720989E-4 0.0 0.0 16.89092435691932 0.0 27 8.141872121720989E-4 0.0 0.0 17.255171360964813 0.0 28 8.141872121720989E-4 0.0 0.0 17.587868610538635 0.0 29 8.141872121720989E-4 0.0 0.0 17.949876599750656 0.0 30 8.141872121720989E-4 0.0 0.0 18.46362873063125 0.0 31 9.159606136936112E-4 0.0 0.0 18.84782332137496 0.0 32 0.0010177340152151236 0.0 0.0 19.293896140243746 0.0 33 0.0010177340152151236 0.0 0.0 19.690914179579167 0.0 34 0.001119507416736636 0.0 0.0 20.107981579014325 0.0 35 0.001119507416736636 0.0 0.0 20.51415922448668 0.0 36 0.001119507416736636 0.0 0.0 20.890822583517796 0.0 37 0.001119507416736636 0.0 0.0 21.276645548685853 0.0 38 0.001119507416736636 0.0 0.0 21.72414319517594 0.0 39 0.001119507416736636 0.0 0.0 22.402055822710736 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9505 0.0 43.982113 1 CGTTATT 1230 0.0 43.353657 1 CGGTCTA 65 0.0 41.53846 31 CCGACGG 40 3.457535E-7 39.375 2 TAGACGG 70 0.0 38.571426 2 TACGGTT 35 6.2473664E-6 38.571426 33 GTTATTT 1420 0.0 38.34507 2 CACGACC 470 0.0 38.29787 27 GTTTTTT 11140 0.0 37.930878 2 GACACGA 475 0.0 37.894737 25 AGACACG 475 0.0 37.894737 24 TCAAGCG 475 0.0 37.894737 17 GCGAGAC 480 0.0 37.500004 21 AAATGCG 30 1.13980124E-4 37.500004 1 GCGTAAG 90 0.0 37.5 1 AACACGT 430 0.0 37.151165 41 CGTTTTC 310 0.0 37.01613 1 CAACACG 55 2.748493E-9 36.81818 22 ACACGAC 490 0.0 36.734695 26 GTCAAGC 485 0.0 36.649487 16 >>END_MODULE