##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935806.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 564445 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05897651675539 33.0 31.0 34.0 30.0 34.0 2 32.19307284146374 33.0 31.0 34.0 30.0 34.0 3 32.086474324336294 33.0 31.0 34.0 30.0 34.0 4 35.75724472712133 37.0 35.0 37.0 33.0 37.0 5 32.15307248713338 37.0 35.0 37.0 0.0 37.0 6 33.906587887216645 37.0 35.0 37.0 17.0 37.0 7 35.53488648141094 37.0 35.0 37.0 32.0 37.0 8 35.777896872148744 37.0 35.0 37.0 35.0 37.0 9 37.731222705489465 39.0 38.0 39.0 35.0 39.0 10 37.36417720061299 39.0 37.0 39.0 34.0 39.0 11 37.328944361275234 39.0 37.0 39.0 34.0 39.0 12 37.286359166969326 39.0 37.0 39.0 34.0 39.0 13 37.231983629937375 39.0 37.0 39.0 34.0 39.0 14 38.382574032899576 40.0 38.0 41.0 34.0 41.0 15 38.53578648052512 40.0 38.0 41.0 34.0 41.0 16 38.49533789828947 40.0 38.0 41.0 34.0 41.0 17 38.50697765061255 40.0 38.0 41.0 34.0 41.0 18 38.37102286316647 40.0 38.0 41.0 34.0 41.0 19 38.18753820124193 40.0 37.0 41.0 34.0 41.0 20 38.19120906377061 40.0 37.0 41.0 34.0 41.0 21 38.104922534525066 40.0 36.0 41.0 34.0 41.0 22 38.18475316461303 40.0 36.0 41.0 34.0 41.0 23 38.19564705152849 40.0 36.0 41.0 34.0 41.0 24 38.16204058854273 40.0 36.0 41.0 34.0 41.0 25 37.88534223883638 40.0 36.0 41.0 34.0 41.0 26 37.93007821842695 40.0 36.0 41.0 34.0 41.0 27 37.91920736298488 40.0 36.0 41.0 34.0 41.0 28 37.84000566928576 40.0 36.0 41.0 34.0 41.0 29 37.78310730009124 40.0 36.0 41.0 33.0 41.0 30 37.593802762005154 40.0 35.0 41.0 33.0 41.0 31 37.53462073364101 40.0 35.0 41.0 33.0 41.0 32 37.3732976640771 40.0 35.0 41.0 33.0 41.0 33 37.20906908556192 40.0 35.0 41.0 33.0 41.0 34 36.99943307142414 40.0 35.0 41.0 32.0 41.0 35 36.90444418853919 40.0 35.0 41.0 31.0 41.0 36 36.76617562384289 40.0 35.0 41.0 31.0 41.0 37 36.686720583936435 40.0 35.0 41.0 31.0 41.0 38 36.56701007184048 40.0 35.0 41.0 31.0 41.0 39 36.45225841313148 39.0 35.0 41.0 30.0 41.0 40 36.39378327383536 39.0 35.0 41.0 30.0 41.0 41 36.22960607322237 39.0 35.0 41.0 30.0 41.0 42 36.21636297602069 39.0 35.0 41.0 30.0 41.0 43 36.16281125707553 39.0 35.0 41.0 30.0 41.0 44 36.11503512299693 39.0 35.0 41.0 30.0 41.0 45 36.07913791423434 39.0 35.0 41.0 30.0 41.0 46 35.988115759728586 39.0 35.0 41.0 29.0 41.0 47 35.90741170530344 39.0 35.0 41.0 29.0 41.0 48 35.854386166942746 39.0 35.0 41.0 29.0 41.0 49 35.82963973460656 39.0 35.0 41.0 29.0 41.0 50 35.71644181452577 38.0 35.0 41.0 28.0 41.0 51 34.72064771589792 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 9.0 9 29.0 10 19.0 11 15.0 12 12.0 13 8.0 14 23.0 15 23.0 16 39.0 17 91.0 18 194.0 19 304.0 20 531.0 21 886.0 22 1348.0 23 2151.0 24 3155.0 25 4876.0 26 6659.0 27 7428.0 28 7700.0 29 7654.0 30 8404.0 31 10444.0 32 13458.0 33 19875.0 34 32656.0 35 39873.0 36 43577.0 37 65949.0 38 106885.0 39 180012.0 40 155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.50901327853024 19.592520086102276 22.04306885524719 15.855397780120295 2 36.95169591368512 23.00773326010506 23.4478115671146 16.592759259095217 3 31.06857178290179 23.597516144177025 29.254577505337103 16.079334567584088 4 27.147552020125964 24.872928274676894 29.731506169777393 18.248013535419748 5 22.22147419146241 35.74555536854787 24.973558096891637 17.05941234309809 6 24.471649142077617 33.124750861465685 27.609067313910124 14.79453268254657 7 77.17102640647006 5.14115635712957 13.016680101692813 4.6711371347075445 8 78.14756087838497 5.251175933881955 12.088157393545874 4.513105794187211 9 72.30412174791167 6.283163107122926 14.328588259263524 7.084126885701885 10 37.32285696569196 26.920426259422975 20.98060927105387 14.776107503831195 11 28.27786586824226 23.997732285696568 29.10930205777357 18.61509978828761 12 24.86034954690005 21.79964389798829 32.7776842739328 20.562322281178858 13 24.0274960359291 22.33539140217382 35.05159935866205 18.585513203235035 14 20.42696808369283 25.029187963397675 34.08799794488392 20.45584600802558 15 19.336870731426444 24.20625570250423 35.98614568292748 20.470727883141848 16 23.241768462826315 24.25373597073231 32.41839328898298 20.086102277458387 17 23.244957436065516 23.745449069439893 31.620618483643227 21.388975010851365 18 23.819858445021218 23.315292012507864 32.28870837725553 20.57614116521539 19 22.740391003552162 25.428518279017442 30.354418942501045 21.476671774929358 20 23.516374491757393 26.485131412272235 29.96022641709998 20.038267678870394 21 23.197122837477522 26.0020019665335 31.762173462427697 19.038701733561286 22 22.330962272674928 22.621336002622044 32.12642507241627 22.92127665228676 23 20.973699829035603 25.733951049260778 31.795657681439288 21.496691440264332 24 21.235727130189833 24.855034591501386 31.888846566095904 22.02039171221288 25 22.591217922029607 26.531371524240626 29.510935520732755 21.366475032997016 26 21.160431928708732 25.119719370354947 30.56595416736795 23.153894533568373 27 22.87397354923863 24.059208603141137 30.690855619236597 22.375962228383635 28 20.698030809024797 25.722789642923583 30.58136753802408 22.99781201002755 29 21.887694992426187 25.298479036930082 30.081053069829654 22.732772900814073 30 23.24194562800627 24.319109922135905 30.75693823136001 21.682006218497815 31 23.742968756920515 24.483164878774726 29.263258599154923 22.510607765149835 32 24.150448670818236 24.64367653181444 29.377884470586153 21.827990326781173 33 23.54100045177121 23.288540070334577 29.098672146976234 24.07178733091798 34 21.169113022526552 24.627023004898618 31.235284217239943 22.968579755334886 35 22.589269105050093 25.081097361124645 30.264419031083627 22.065214502741632 36 23.675823153717367 25.387061626907848 28.570719910708746 22.366395308666036 37 22.40980077775514 24.868853475537918 30.576584078165276 22.144761668541666 38 22.482615666716864 24.79869606427553 29.74709670561348 22.97159156339413 39 22.068580641160786 23.762634091895578 30.084950703788678 24.08383456315496 40 24.14672820203917 23.10730009124007 30.66410367706331 22.08186802965745 41 21.94403351965205 23.95290949516782 30.536544747495327 23.566512237684805 42 22.249820620255296 24.93883372162035 30.415363764405747 22.39598189371861 43 22.709564262239898 23.54649257234983 30.88538298682777 22.8585601785825 44 22.943599464961157 23.79470098946753 29.704399897244194 23.557299648327117 45 21.8800768896881 22.985410447430663 29.74337623683441 25.391136426046824 46 23.28889440069449 23.79948444932633 29.00566042749958 23.905960722479605 47 21.055195811815146 24.60044822790529 31.392961227400367 22.951394732879198 48 21.87493909946939 24.917573900025687 29.95721460904074 23.250272391464183 49 22.791591740559312 23.473323353028196 30.434320438660983 23.30076446775151 50 20.914172328570544 23.852456838133033 31.242370824438165 23.99100000885826 51 21.444959207717314 23.069032412369673 29.917175278370788 25.56883310154222 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 262.0 1 475.0 2 688.0 3 5327.0 4 9966.0 5 6420.5 6 2875.0 7 2868.5 8 2862.0 9 2766.5 10 2671.0 11 2709.0 12 2747.0 13 2665.0 14 2583.0 15 2426.0 16 2269.0 17 2196.5 18 2124.0 19 2127.0 20 2130.0 21 2160.0 22 2190.0 23 2250.5 24 2311.0 25 2896.5 26 4093.0 27 4704.0 28 5465.5 29 6227.0 30 7296.5 31 8366.0 32 9176.0 33 9986.0 34 12077.0 35 14168.0 36 15395.5 37 16623.0 38 18085.5 39 19548.0 40 21521.0 41 23494.0 42 25674.0 43 27854.0 44 31207.0 45 34560.0 46 41994.5 47 49429.0 48 50709.5 49 51990.0 50 51953.5 51 51917.0 52 46697.5 53 41478.0 54 37626.5 55 33775.0 56 31307.0 57 28839.0 58 26846.0 59 24853.0 60 22462.0 61 20071.0 62 17961.0 63 15851.0 64 14091.5 65 12332.0 66 10733.5 67 9135.0 68 7932.0 69 6729.0 70 5787.0 71 4845.0 72 4314.0 73 3783.0 74 2970.0 75 1742.0 76 1327.0 77 978.0 78 629.0 79 469.0 80 309.0 81 269.5 82 230.0 83 137.0 84 44.0 85 34.0 86 24.0 87 14.0 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 564445.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.806078343324124 #Duplication Level Percentage of deduplicated Percentage of total 1 71.69277627575067 27.821154928071895 2 9.649561578284997 7.48923285171316 3 4.036903392968659 4.699691679959183 4 2.4459181422416396 3.7966596419674743 5 1.8031327979619298 3.4986256310563943 6 1.4180658870428375 3.301774554514786 7 1.2310722027728207 3.344115904296347 8 1.0977140718371576 3.4078382616225653 9 0.9305203284663751 3.2498860289869667 >10 5.630303175762244 33.55040336426407 >50 0.03731369712243928 0.9937558386074477 >100 0.020269168804873457 1.4283340798277013 >500 0.0027639775643009262 0.7770923961215291 >1k 0.0032246404916844136 1.5675921834804898 >5k 4.6066292738348763E-4 1.073842655510013 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6007 1.0642312359928778 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTC 1698 0.30082647556449255 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTG 1324 0.23456669826112378 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTT 1300 0.230314733942191 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGC 1207 0.21383837220632657 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCG 1195 0.21171239004686018 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTC 1041 0.18442895233370835 No Hit GCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 1004 0.17787384067535367 No Hit CCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGC 888 0.157322679800512 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCT 775 0.13730301446553694 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 683 0.12100381790962804 No Hit CGTCTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCT 678 0.12011799200985038 No Hit CTGTCTCTTATACACATCTGACGCAGCTCTGTTCGTATGCCGTCTTCTGCT 662 0.11728334913056189 Illumina Single End Adapter 1 (95% over 21bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 661 0.11710618395060636 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5433035991106306E-4 0.0 0.0 0.12118098308958357 0.0 2 3.5433035991106306E-4 0.0 0.0 0.5382278167049048 0.0 3 3.5433035991106306E-4 0.0 0.0 0.9244479090079636 0.0 4 3.5433035991106306E-4 0.0 0.0 1.352833314140439 0.0 5 3.5433035991106306E-4 0.0 0.0 2.5593281896376086 0.0 6 3.5433035991106306E-4 0.0 0.0 3.7725553419730886 0.0 7 3.5433035991106306E-4 0.0 0.0 4.731904791432292 0.0 8 3.5433035991106306E-4 0.0 0.0 6.059049154479179 0.0 9 3.5433035991106306E-4 0.0 0.0 6.777099628838948 0.0 10 3.5433035991106306E-4 0.0 0.0 8.050562942359308 0.0 11 3.5433035991106306E-4 0.0 0.0 9.16227444658027 0.0 12 3.5433035991106306E-4 0.0 0.0 10.238552914810123 0.0 13 3.5433035991106306E-4 0.0 0.0 10.694753253195618 0.0 14 3.5433035991106306E-4 0.0 0.0 10.979634862564112 0.0 15 3.5433035991106306E-4 0.0 0.0 11.288079440866692 0.0 16 3.5433035991106306E-4 0.0 0.0 11.76908290444596 0.0 17 3.5433035991106306E-4 0.0 0.0 12.286936725455979 0.0 18 3.5433035991106306E-4 0.0 0.0 12.866798359450433 0.0 19 0.0012401562596887207 0.0 0.0 13.279770393926778 0.0 20 0.0012401562596887207 0.0 0.0 13.648273968234284 0.0 21 0.0012401562596887207 0.0 0.0 14.063726315230005 0.0 22 0.0012401562596887207 0.0 0.0 14.538528997510829 0.0 23 0.0012401562596887207 0.0 0.0 14.994552170716368 0.0 24 0.0012401562596887207 0.0 0.0 15.388036035397603 0.0 25 0.0012401562596887207 0.0 0.0 15.720752243354092 0.0 26 0.0014173214396442522 0.0 0.0 16.057543250449555 0.0 27 0.0014173214396442522 0.0 0.0 16.448546802611414 0.0 28 0.0014173214396442522 0.0 0.0 16.815278725119366 0.0 29 0.0014173214396442522 0.0 0.0 17.210179911240246 0.0 30 0.0015944866195997838 0.0 0.0 17.71297469195404 0.0 31 0.0015944866195997838 0.0 0.0 18.098663288717237 0.0 32 0.0015944866195997838 0.0 0.0 18.472658983603363 0.0 33 0.0015944866195997838 0.0 0.0 18.873760951022685 0.0 34 0.0015944866195997838 0.0 0.0 19.279646378300807 0.0 35 0.0015944866195997838 0.0 0.0 19.71299240847204 0.0 36 0.0015944866195997838 0.0 0.0 20.106299107973317 0.0 37 0.0015944866195997838 0.0 0.0 20.500668798554333 0.0 38 0.0015944866195997838 0.0 0.0 20.952617172620894 0.0 39 0.0015944866195997838 0.0 0.0 21.534959119134726 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 30 2.1635296E-6 45.000004 1 CACGAGG 45 3.8380676E-10 45.000004 2 CCGATTC 20 7.0302334E-4 45.0 11 ACTACGG 40 6.8048394E-9 45.0 2 ATTATCG 20 7.0302334E-4 45.0 30 TATCGCG 20 7.0302334E-4 45.0 32 ATCGCCT 20 7.0302334E-4 45.0 41 TACGTCG 20 7.0302334E-4 45.0 1 CGTTTTT 2910 0.0 42.835052 1 TACGAAT 90 0.0 42.500004 12 CGAATAT 90 0.0 42.500004 14 GCTACGA 90 0.0 42.500004 10 CGTTATT 375 0.0 41.4 1 TCACGAC 50 1.0786607E-9 40.5 25 CTACGAA 95 0.0 40.263157 11 TAATACG 80 0.0 39.375 4 CGTTCTG 195 0.0 38.076923 1 AGTACGG 95 0.0 37.894737 2 TTACGGG 155 0.0 37.74194 3 GTATACG 30 1.1391856E-4 37.500004 1 >>END_MODULE