##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935805.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 441186 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.998732960701382 33.0 31.0 34.0 30.0 34.0 2 32.111485858572124 33.0 31.0 34.0 30.0 34.0 3 32.076731809259584 33.0 31.0 34.0 30.0 34.0 4 35.70988879973526 37.0 35.0 37.0 33.0 37.0 5 31.94775219521925 37.0 35.0 37.0 0.0 37.0 6 33.76849446718617 37.0 35.0 37.0 17.0 37.0 7 35.44621996164883 37.0 35.0 37.0 32.0 37.0 8 35.70144338215628 37.0 35.0 37.0 33.0 37.0 9 37.63701250719651 39.0 37.0 39.0 35.0 39.0 10 37.258836409133565 39.0 37.0 39.0 34.0 39.0 11 37.23483066099106 39.0 37.0 39.0 34.0 39.0 12 37.137787690452555 39.0 37.0 39.0 34.0 39.0 13 37.044656902077584 39.0 37.0 39.0 33.0 39.0 14 38.1646221774943 40.0 38.0 41.0 33.0 41.0 15 38.31989909017965 40.0 38.0 41.0 33.0 41.0 16 38.302187739411494 40.0 37.0 41.0 34.0 41.0 17 38.302006409994874 40.0 37.0 41.0 34.0 41.0 18 38.23904883654513 40.0 37.0 41.0 34.0 41.0 19 38.11792758609747 40.0 37.0 41.0 34.0 41.0 20 38.18139288191375 40.0 37.0 41.0 34.0 41.0 21 38.11986554423758 40.0 37.0 41.0 34.0 41.0 22 38.20117592126677 40.0 37.0 41.0 34.0 41.0 23 38.2052059675511 40.0 37.0 41.0 34.0 41.0 24 38.164377382781865 40.0 37.0 41.0 34.0 41.0 25 37.898065668448226 40.0 36.0 41.0 33.0 41.0 26 37.935088602086196 40.0 36.0 41.0 34.0 41.0 27 37.91467997624585 40.0 36.0 41.0 34.0 41.0 28 37.85471207155259 40.0 36.0 41.0 33.0 41.0 29 37.83205269432847 40.0 36.0 41.0 33.0 41.0 30 37.669030748935825 40.0 36.0 41.0 33.0 41.0 31 37.66032693693816 40.0 36.0 41.0 33.0 41.0 32 37.57021981658529 40.0 36.0 41.0 33.0 41.0 33 37.52884951018391 40.0 36.0 41.0 33.0 41.0 34 37.444472399396176 40.0 36.0 41.0 33.0 41.0 35 37.3883146790696 40.0 35.0 41.0 33.0 41.0 36 37.31275017792949 40.0 35.0 41.0 33.0 41.0 37 37.23544264777214 40.0 35.0 41.0 33.0 41.0 38 37.13904566328034 40.0 35.0 41.0 32.0 41.0 39 37.043199466891515 39.0 35.0 41.0 32.0 41.0 40 36.95669400207622 39.0 35.0 41.0 32.0 41.0 41 36.822904625260094 39.0 35.0 41.0 31.0 41.0 42 36.81062862375506 39.0 35.0 41.0 31.0 41.0 43 36.75472476461175 39.0 35.0 41.0 31.0 41.0 44 36.69770572955624 39.0 35.0 41.0 31.0 41.0 45 36.66789970669967 39.0 35.0 41.0 31.0 41.0 46 36.523577357395745 39.0 35.0 41.0 31.0 41.0 47 36.437688412596955 39.0 35.0 41.0 31.0 41.0 48 36.395082799544866 38.0 35.0 41.0 31.0 41.0 49 36.36260670102859 38.0 35.0 41.0 31.0 41.0 50 36.25086924789091 38.0 35.0 40.0 31.0 41.0 51 35.19960288857761 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 8.0 9 22.0 10 22.0 11 10.0 12 11.0 13 13.0 14 10.0 15 19.0 16 38.0 17 67.0 18 93.0 19 195.0 20 394.0 21 579.0 22 876.0 23 1334.0 24 1839.0 25 2397.0 26 2988.0 27 3670.0 28 4178.0 29 5063.0 30 6282.0 31 8206.0 32 11023.0 33 16653.0 34 28176.0 35 35026.0 36 36168.0 37 55379.0 38 85994.0 39 134370.0 40 79.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.67166682532991 19.469792785809158 23.000503189131113 11.85803719972982 2 32.78209190681481 24.93302144673675 24.411019388647873 17.873867257800566 3 32.772118788900826 24.583735657976455 25.897693943144162 16.746451609978557 4 28.493877865571438 25.334212781003927 26.405189647903605 19.766719705521027 5 23.516838702950682 36.59748949422693 21.827981848925397 18.057689953896997 6 25.45230356357636 34.90840597843087 24.311061547737236 15.32822891025554 7 78.85585671349499 6.209625872081163 9.969491325654033 4.965026088769816 8 79.82778238656711 6.008123557864484 8.786770205763556 5.377323849804845 9 74.11386580716524 6.65932282529364 11.056334516507777 8.170476851033351 10 42.204875041365774 22.776561359607967 18.201393516566707 16.81717008245955 11 30.716296527994995 23.775459783402013 24.048587217182778 21.459656471420217 12 26.54594660755328 20.236136232790706 30.72717629299207 22.49074086666395 13 24.747158794703367 22.421155703036813 32.675334212781 20.156351289478813 14 21.91660660129741 24.98651362463904 31.70454184856274 21.392337925500808 15 19.815451986237097 22.8239336696994 35.161587176383655 22.199027167679844 16 23.547211380234188 22.963783982265983 30.331198179452656 23.157806458047173 17 23.81648556391182 23.111340795038828 28.34609439102782 24.72607925002153 18 24.383139990842864 22.652577370995452 29.55352164393249 23.41076099422919 19 24.109332571749782 24.564922731002344 26.92515175005553 24.40059294719234 20 25.515542197621865 25.363678811204345 27.646162842882593 21.474616148291197 21 23.92369658148717 25.778923175259415 29.12671752956803 21.170662713685385 22 23.249151151668457 22.47578118979297 28.69651348864198 25.578554169896595 23 22.854986332295223 25.002379948593113 27.925636806244984 24.21699691286668 24 23.291310241032125 23.745767091430825 28.37533375945746 24.587588908079585 25 22.966957247056797 26.000371725304067 26.598078814830934 24.434592212808205 26 22.08138970864896 24.08077318863246 27.088121563240904 26.74971553947768 27 22.592738663511536 24.030907599062527 28.470985026723422 24.905368710702515 28 20.217323305816596 24.909901946117962 28.548050028786044 26.324724719279395 29 21.80599565716047 24.384953285009043 27.56297797300912 26.24607308482137 30 22.747548652949096 23.54947799794191 28.756125534355125 24.946847814753866 31 23.573957469185334 24.24510297244246 26.13931539078756 26.041624167584647 32 23.86884443296025 26.261486085233894 24.99467344838685 24.874996033419013 33 23.141033487010013 23.19316569428767 26.019411314048952 27.646389504653367 34 21.3012198936503 23.821018799327266 28.245456564804865 26.632304742217567 35 21.12170377119854 25.808162543689058 27.526258766143986 25.543874918968417 36 22.408235982102788 24.446378624888368 26.110756007670233 27.03462938533861 37 20.283961866423684 25.628193097695757 28.08452670755645 26.00331832832411 38 20.908415044901695 26.765128539890203 25.40175798869411 26.924698426513988 39 21.574573989201834 24.192970765164805 26.84151355664051 27.390941688992854 40 22.811467272306917 23.30853653561083 28.62624833970253 25.25374785237972 41 20.30957464652097 23.857964667963174 28.068887045373152 27.76357364014271 42 21.06775826975471 24.43617884520361 28.61400860408082 25.882054280960865 43 22.201067123616795 22.762281668049305 28.190377754507168 26.84627345382673 44 21.944259337331648 22.827106934490217 27.69081521172476 27.537818516453378 45 21.804182362994293 22.524286808738264 27.45282035241372 28.21871047585372 46 23.4098543471461 23.16483297294112 27.680388770269225 25.744923909643553 47 20.264242292366486 24.350954019393182 29.83004900427484 25.55475468396549 48 20.662033700072076 24.71474616148291 28.056193986209898 26.567026152235112 49 22.208093638510743 22.70946947545933 29.4408707438586 25.641566142171328 50 21.771769729773837 22.459688204068126 29.20514250225528 26.563399563902752 51 20.71461923089128 23.088674617961587 27.317276613491813 28.87942953765532 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 170.0 1 389.0 2 608.0 3 1586.5 4 2565.0 5 1686.5 6 808.0 7 775.5 8 743.0 9 781.5 10 820.0 11 791.0 12 762.0 13 777.5 14 793.0 15 780.5 16 768.0 17 765.5 18 763.0 19 726.0 20 689.0 21 989.0 22 1289.0 23 1380.5 24 1472.0 25 1575.5 26 2199.5 27 2720.0 28 2950.5 29 3181.0 30 3949.0 31 4717.0 32 5754.5 33 6792.0 34 8001.0 35 9210.0 36 9848.0 37 10486.0 38 11913.0 39 13340.0 40 14663.5 41 15987.0 42 18302.0 43 20617.0 44 23262.0 45 25907.0 46 32672.5 47 39438.0 48 41414.5 49 43391.0 50 43177.0 51 42963.0 52 38124.0 53 33285.0 54 30351.0 55 27417.0 56 25739.0 57 24061.0 58 23275.0 59 22489.0 60 21464.0 61 20439.0 62 18471.0 63 16503.0 64 14602.5 65 12702.0 66 11439.5 67 10177.0 68 8734.0 69 7291.0 70 6148.0 71 5005.0 72 4251.0 73 3497.0 74 3038.5 75 2021.5 76 1463.0 77 1106.5 78 750.0 79 659.5 80 569.0 81 365.0 82 161.0 83 113.0 84 65.0 85 47.0 86 29.0 87 21.5 88 14.0 89 10.5 90 7.0 91 4.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 441186.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.32760818921243 #Duplication Level Percentage of deduplicated Percentage of total 1 71.8779388690887 26.830315395535052 2 10.378603997442992 7.748169271350918 3 4.053417500179102 4.539131408219474 4 2.1952441482937024 3.277728537886747 5 1.448198934261789 2.7028901199079534 6 1.1038891612535204 2.4723325257353848 7 0.8842578455294449 2.3105061277312173 8 0.800564309164823 2.390652069021763 9 0.7169854374353543 2.408701633736219 >10 6.4650475002185095 40.32263536513956 >50 0.04404326930247512 1.143514130371243 >100 0.02752704331404695 1.8538720496174368 >500 0.0012234241472909755 0.3564348157966275 >1k 0.003058560368227439 1.6431165499503728 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTC 1673 0.3792051425022553 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1480 0.3354594207431786 No Hit GCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 1480 0.3354594207431786 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGC 1345 0.3048600816889022 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCG 1218 0.2760740368008051 No Hit CCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 908 0.2058088878613555 TruSeq Adapter, Index 23 (95% over 22bp) CTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGCT 653 0.14801013631438895 TruSeq Adapter, Index 20 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.799853123172539E-4 0.0 0.0 0.15413000412524422 0.0 2 6.799853123172539E-4 0.0 0.0 0.8733278027861265 0.0 3 6.799853123172539E-4 0.0 0.0 1.2078805764462155 0.0 4 6.799853123172539E-4 0.0 0.0 1.6856835892344726 0.0 5 6.799853123172539E-4 0.0 0.0 3.168051570086086 0.0 6 6.799853123172539E-4 0.0 0.0 4.060192299846324 0.0 7 6.799853123172539E-4 0.0 0.0 4.9208270434691945 0.0 8 6.799853123172539E-4 0.0 0.0 6.25155829967406 0.0 9 6.799853123172539E-4 0.0 0.0 6.791013314112416 0.0 10 6.799853123172539E-4 0.0 0.0 8.171383498116441 0.0 11 6.799853123172539E-4 0.0 0.0 9.545180490768066 0.0 12 6.799853123172539E-4 0.0 0.0 10.968389749448079 0.0 13 6.799853123172539E-4 0.0 0.0 11.46160576264886 0.0 14 6.799853123172539E-4 0.0 0.0 11.699827283730672 0.0 15 6.799853123172539E-4 0.0 0.0 12.089232205917686 0.0 16 6.799853123172539E-4 0.0 0.0 12.776017371358112 0.0 17 6.799853123172539E-4 0.0 0.0 13.557547156981409 0.0 18 6.799853123172539E-4 0.0 0.0 14.402315576650212 0.0 19 6.799853123172539E-4 0.0 0.0 14.979396445036787 0.0 20 6.799853123172539E-4 0.0 0.0 15.519984768329005 0.0 21 6.799853123172539E-4 0.0 0.0 16.126531666915994 0.0 22 6.799853123172539E-4 0.0 0.0 16.791103978820725 0.0 23 6.799853123172539E-4 0.0 0.0 17.417370451464915 0.0 24 6.799853123172539E-4 0.0 0.0 17.96543861319262 0.0 25 6.799853123172539E-4 0.0 0.0 18.46137456764267 0.0 26 6.799853123172539E-4 0.0 0.0 18.895431858671852 0.0 27 9.06647083089672E-4 0.0 0.0 19.39590104853735 0.0 28 9.06647083089672E-4 0.0 0.0 19.853757825497635 0.0 29 9.06647083089672E-4 0.0 0.0 20.328840897036624 0.0 30 9.06647083089672E-4 0.0 0.0 20.90297516240316 0.0 31 9.06647083089672E-4 0.0 0.0 21.39143127841772 0.0 32 0.00113330885386209 0.0 0.0 21.8846472916185 0.0 33 0.00113330885386209 0.0 0.0 22.3456773333696 0.0 34 0.00113330885386209 0.0 0.0 22.827106934490214 0.0 35 0.00113330885386209 0.0 0.0 23.360215419346943 0.0 36 0.00113330885386209 0.0 0.0 23.808325740164012 0.0 37 0.00113330885386209 0.0 0.0 24.303581709301746 0.0 38 0.00113330885386209 0.0 0.0 24.819010576038224 0.0 39 0.00113330885386209 0.0 0.0 25.478822990756733 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 90 0.0 45.000004 4 TTGCTAG 20 7.0285547E-4 45.000004 1 TACGGGT 30 2.1624492E-6 45.000004 4 GCCGATA 20 7.0285547E-4 45.000004 9 CTAACGG 20 7.0285547E-4 45.000004 2 GTATACC 20 7.0285547E-4 45.000004 13 CGGCTAC 20 7.0285547E-4 45.000004 25 CCGGTAT 40 6.7993824E-9 45.000004 42 GCGTACG 40 6.7993824E-9 45.000004 1 TTTCGCG 25 3.886885E-5 45.0 1 TAGCCGT 50 2.1827873E-11 45.0 44 ATAACGC 25 3.886885E-5 45.0 11 TGCGTAG 25 3.886885E-5 45.0 1 TTACGGG 125 0.0 44.999996 3 TATAGCG 60 3.6379788E-12 41.250004 1 TAACGGG 105 0.0 38.57143 3 GTTGACG 35 6.2395393E-6 38.571426 1 ATTACGG 35 6.2395393E-6 38.571426 2 CGTTAGG 35 6.2395393E-6 38.571426 2 AACGAGC 70 0.0 38.571426 15 >>END_MODULE