##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935800.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 445082 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.927474038491784 33.0 31.0 34.0 30.0 34.0 2 31.97385200929267 33.0 31.0 34.0 30.0 34.0 3 32.00226475121438 33.0 31.0 34.0 30.0 34.0 4 35.67775825578208 37.0 35.0 37.0 33.0 37.0 5 34.72290948634184 37.0 35.0 37.0 33.0 37.0 6 35.22840510287992 37.0 35.0 37.0 33.0 37.0 7 35.805505502356866 37.0 35.0 37.0 35.0 37.0 8 35.80222520793921 37.0 35.0 37.0 35.0 37.0 9 37.67208963741513 39.0 37.0 39.0 35.0 39.0 10 37.21395158644924 39.0 37.0 39.0 34.0 39.0 11 37.146622420138314 39.0 37.0 39.0 34.0 39.0 12 36.92294228928602 39.0 35.0 39.0 33.0 39.0 13 36.72476532414252 39.0 35.0 39.0 33.0 39.0 14 37.7242373315479 40.0 36.0 41.0 33.0 41.0 15 37.864575516421695 40.0 36.0 41.0 33.0 41.0 16 37.98303458688511 40.0 36.0 41.0 33.0 41.0 17 37.95777856664615 40.0 36.0 41.0 33.0 41.0 18 37.96271248893462 40.0 36.0 41.0 34.0 41.0 19 37.88482122395424 40.0 36.0 41.0 34.0 41.0 20 37.831878170764035 40.0 36.0 41.0 33.0 41.0 21 37.78503736390148 39.0 35.0 41.0 33.0 41.0 22 37.83501916500779 40.0 35.0 41.0 33.0 41.0 23 37.865777542115836 40.0 36.0 41.0 34.0 41.0 24 37.82649938662988 40.0 35.0 41.0 34.0 41.0 25 37.685417518569615 39.0 35.0 41.0 33.0 41.0 26 37.72396996508508 40.0 35.0 41.0 33.0 41.0 27 37.74180712767535 40.0 35.0 41.0 34.0 41.0 28 37.5984537680697 40.0 35.0 41.0 33.0 41.0 29 37.57026570384783 40.0 35.0 41.0 33.0 41.0 30 37.44390247190405 39.0 35.0 41.0 33.0 41.0 31 37.42821996845525 39.0 35.0 41.0 33.0 41.0 32 37.40803941745566 40.0 35.0 41.0 33.0 41.0 33 37.27389784354344 39.0 35.0 41.0 33.0 41.0 34 37.18077118373693 39.0 35.0 41.0 33.0 41.0 35 37.171453799524585 39.0 35.0 41.0 33.0 41.0 36 37.0799740272579 39.0 35.0 41.0 32.0 41.0 37 37.05740964586301 39.0 35.0 41.0 32.0 41.0 38 36.96524460661182 39.0 35.0 41.0 32.0 41.0 39 36.910162621719145 39.0 35.0 41.0 32.0 41.0 40 36.782911912861 39.0 35.0 41.0 31.0 41.0 41 36.71760933940263 39.0 35.0 41.0 31.0 41.0 42 36.7836106605075 39.0 35.0 41.0 31.0 41.0 43 36.65563424267888 39.0 35.0 41.0 31.0 41.0 44 36.52377988775102 39.0 35.0 41.0 31.0 41.0 45 36.51552073550492 39.0 35.0 41.0 31.0 41.0 46 36.367011022687954 39.0 35.0 40.0 31.0 41.0 47 36.23748882228443 38.0 35.0 40.0 31.0 41.0 48 36.23498591270822 38.0 35.0 40.0 31.0 41.0 49 36.23000930165677 38.0 35.0 40.0 31.0 41.0 50 36.08645148534428 38.0 35.0 40.0 30.0 41.0 51 34.85885072862978 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 7.0 10 13.0 11 10.0 12 10.0 13 9.0 14 9.0 15 16.0 16 35.0 17 54.0 18 111.0 19 218.0 20 405.0 21 637.0 22 961.0 23 1461.0 24 2005.0 25 2579.0 26 3188.0 27 3785.0 28 4430.0 29 5275.0 30 6719.0 31 8830.0 32 11833.0 33 17039.0 34 31944.0 35 43653.0 36 30869.0 37 46667.0 38 83713.0 39 138508.0 40 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.298762924584686 20.91681982196539 23.653618883711317 12.13079836973861 2 30.834318170584297 26.76585438188918 24.628046067915573 17.77178137961095 3 29.737441639967464 26.8516812632279 26.789670218072175 16.62120687873246 4 27.559640695422416 25.14458009984677 29.2471948989175 18.04858430581331 5 25.64695943668807 31.016307107454356 24.607600397230172 18.729133058627397 6 24.596815867637872 35.339780085467396 25.052012887512866 15.011391159381867 7 77.23475674145438 5.686367905239933 12.068113291483368 5.010762061822316 8 77.1837549035908 7.2692223006097745 9.186172435641073 6.360850360158353 9 72.41227459209763 6.420165272916003 11.082227544587289 10.085332590399073 10 41.1939822324875 23.663729380204096 20.45218633869714 14.690102048611267 11 32.483227809706975 25.17603497782431 23.119559991192634 19.22117722127608 12 27.915305494268473 20.92805370695737 29.94436980151972 21.21227099725444 13 23.573633622568426 26.364130654576012 31.606535424932936 18.455700297922633 14 18.89854004430644 31.26435128807725 29.327404837760234 20.509703829856072 15 16.403943542987584 26.023968617018888 38.176560723641934 19.395527116351595 16 19.202753649889235 25.61954875730764 31.85929783725246 23.31839975555066 17 19.299589738520094 25.52361137947614 28.148970302101635 27.02782857990213 18 21.566812407601297 24.94304420309067 31.538233404181703 21.951909985126335 19 22.246237771916185 27.144885661518554 27.315191357996955 23.29368520856831 20 23.738996409650355 26.355817579681943 29.810911247815007 20.094274762852688 21 21.343482773960755 28.92523175504739 29.395706858511467 20.335578612480397 22 19.66514035615909 25.44856902772972 28.77919125015166 26.10709936595953 23 19.171523449611534 27.726351548703388 28.768182042859518 24.333942958825563 24 21.73082712848419 25.597530342723363 29.19506967255472 23.476572856237727 25 18.65835958317793 28.357246529852926 27.818469405637614 25.16592448133153 26 19.32363025240293 27.464377350690434 28.411169177814426 24.800823219092212 27 20.240315267748414 27.824760381233123 26.95368493895507 24.981239412063395 28 17.2833320601597 26.157202493023757 32.99773974233962 23.561725704476927 29 20.794595153252658 23.28177729047681 32.194516965413115 23.729110590857417 30 20.086860398757985 27.530432594443273 29.230793426829216 23.151913579969534 31 21.87911441037831 28.025397567189863 26.938182177666135 23.157305844765684 32 22.595162239767056 28.073703272655376 26.29155975752783 23.039574730049743 33 20.554639369823988 29.224053095834023 25.139637190450298 25.081670343891687 34 20.21200587756863 27.724778804804508 28.651124961243095 23.412090356383768 35 18.980547404747888 26.00509569023236 27.14578437231791 27.86857253270184 36 22.487766299243734 28.07595004965377 27.188473135287428 22.247810515815065 37 17.743696667131 27.31923555659407 31.988712192360058 22.94835558391487 38 18.56781447014258 28.666627722532027 27.751515451085417 25.014042356239973 39 19.70311088743198 28.523058672334535 29.237084402424724 22.536746037808765 40 21.139250744806574 26.928071681173353 27.70365910101959 24.22901847300048 41 18.657685550078412 28.203117627762975 24.939449359893235 28.19974746226538 42 21.02466511788839 24.961467774477512 27.502572559663164 26.511294547970937 43 22.12109229310554 25.002583793548155 27.641198700464187 25.23512521288212 44 20.319851173491628 24.555250493167552 29.443113853177614 25.681784480163206 45 19.319586053805814 25.45463532562539 27.04939763908673 28.176380981482062 46 23.587563639958482 26.232469522470016 27.345972202874975 22.833994634696527 47 17.890860560525926 25.42228173684849 32.06038437860889 24.626473324016697 48 19.14164131553287 25.088860030286554 29.05666820945354 26.712830444727036 49 20.55284194822527 21.99325068189682 33.68952238014568 23.76438498973223 50 20.811670658440466 22.6675084591154 30.94485959890537 25.57596128353876 51 19.00593598482976 23.43298538246885 26.658233763666022 30.902844869035366 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 458.0 1 527.5 2 597.0 3 1047.5 4 1498.0 5 1050.0 6 602.0 7 598.5 8 595.0 9 654.5 10 714.0 11 711.0 12 708.0 13 737.0 14 766.0 15 789.5 16 813.0 17 846.0 18 879.0 19 878.0 20 877.0 21 863.0 22 849.0 23 1157.0 24 1465.0 25 1653.5 26 2139.5 27 2437.0 28 3194.0 29 3951.0 30 4523.5 31 5096.0 32 5785.0 33 6474.0 34 7968.0 35 9462.0 36 10292.0 37 11122.0 38 12898.0 39 14674.0 40 18097.5 41 21521.0 42 26946.0 43 32371.0 44 45511.5 45 58652.0 46 58185.0 47 57718.0 48 56449.0 49 55180.0 50 46500.0 51 37820.0 52 32436.5 53 27053.0 54 24324.0 55 21595.0 56 19432.0 57 17269.0 58 16168.5 59 15068.0 60 12976.5 61 10885.0 62 9513.0 63 8141.0 64 6923.0 65 5705.0 66 4831.5 67 3958.0 68 3183.0 69 2408.0 70 1921.0 71 1434.0 72 1197.0 73 960.0 74 906.0 75 636.5 76 421.0 77 267.5 78 114.0 79 81.0 80 48.0 81 30.5 82 13.0 83 9.0 84 5.0 85 4.5 86 4.0 87 5.0 88 6.0 89 3.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 445082.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.27618539649119 #Duplication Level Percentage of deduplicated Percentage of total 1 71.74776541003529 22.439964127482213 2 12.296392684177725 7.69168514596801 3 4.646452784106645 4.359699561352863 4 2.274404074197436 2.8453873396453564 5 1.369297598449264 2.141320277603466 6 0.848322654882568 1.5919377978090483 7 0.6513000358860774 1.4259126469780026 8 0.5020537963182816 1.256186209013024 9 0.384016064941909 1.0809501878118732 >10 4.652265337906561 35.786748143899956 >50 0.5630151715623638 10.787572460115802 >100 0.053209607529520975 2.7837010488515967 >500 0.006471438753590388 1.3610404546493668 >1k 0.005033341252792525 4.4478945988194285 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGC 4195 0.9425229508270386 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG 3651 0.820298282114307 No Hit GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 3623 0.8140073065187988 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 3457 0.7767108083454285 No Hit CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 2368 0.5320367932201258 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 1469 0.3300515410643432 No Hit TCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1015 0.2280478653371738 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT 895 0.2010865413564242 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 759 0.1705303741782413 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 735 0.1651381093820914 No Hit ACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 725 0.16289133238369558 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTAACAT 663 0.14896131499364162 No Hit GAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 618 0.1388508185008605 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC 596 0.13390790910438974 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTA 532 0.11952853631465664 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCC 529 0.11885450321513788 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4935539967916023E-4 0.0 0.0 0.35004785635006586 0.0 2 4.4935539967916023E-4 0.0 0.0 2.1717346466493814 0.0 3 4.4935539967916023E-4 0.0 0.0 2.859697763558176 0.0 4 4.4935539967916023E-4 0.0 0.0 3.7759334235039836 0.0 5 4.4935539967916023E-4 0.0 0.0 6.447351274596591 0.0 6 4.4935539967916023E-4 0.0 0.0 7.628032587253585 0.0 7 4.4935539967916023E-4 0.0 0.0 8.803770990514108 0.0 8 4.4935539967916023E-4 0.0 0.0 10.4879550285116 0.0 9 4.4935539967916023E-4 0.0 0.0 11.010555358338463 0.0 10 4.4935539967916023E-4 0.0 0.0 13.137354465019929 0.0 11 4.4935539967916023E-4 0.0 0.0 15.085984155728607 0.0 12 4.4935539967916023E-4 0.0 0.0 17.562831118760137 0.0 13 4.4935539967916023E-4 0.0 0.0 18.312355925424978 0.0 14 4.4935539967916023E-4 0.0 0.0 18.661280393275845 0.0 15 4.4935539967916023E-4 0.0 0.0 19.229040940770464 0.0 16 4.4935539967916023E-4 0.0 0.0 20.197401827079055 0.0 17 4.4935539967916023E-4 0.0 0.0 21.37246619724006 0.0 18 4.4935539967916023E-4 0.0 0.0 22.79669813652316 0.0 19 4.4935539967916023E-4 0.0 0.0 23.71630396196656 0.0 20 4.4935539967916023E-4 0.0 0.0 24.60917314112905 0.0 21 4.4935539967916023E-4 0.0 0.0 25.52990235507165 0.0 22 4.4935539967916023E-4 0.0 0.0 26.523202466062433 0.0 23 4.4935539967916023E-4 0.0 0.0 27.458311052794766 0.0 24 4.4935539967916023E-4 0.0 0.0 28.16290031949169 0.0 25 4.4935539967916023E-4 0.0 0.0 28.753353314670107 0.0 26 4.4935539967916023E-4 0.0 0.0 29.386045717418362 0.0 27 4.4935539967916023E-4 0.0 0.0 30.0191874755663 0.0 28 4.4935539967916023E-4 0.0 0.0 30.648285035117123 0.0 29 4.4935539967916023E-4 0.0 0.0 31.25087062608688 0.0 30 4.4935539967916023E-4 0.0 0.0 31.9446753631915 0.0 31 6.740330995187404E-4 0.0 0.0 32.57691841054008 0.0 32 6.740330995187404E-4 0.0 0.0 33.15681155382604 0.0 33 0.0011233884991979006 0.0 0.0 33.72973968841696 0.0 34 0.0013480661990374807 0.0 0.0 34.31502509649907 0.0 35 0.0013480661990374807 0.0 0.0 34.9418758790515 0.0 36 0.0013480661990374807 0.0 0.0 35.51884821223954 0.0 37 0.0013480661990374807 0.0 0.0 36.10211152102309 0.0 38 0.0013480661990374807 0.0 0.0 36.67122013471675 0.0 39 0.0013480661990374807 0.0 0.0 37.29829559496902 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAAG 45 3.8380676E-10 45.000004 1 CTTACGG 35 1.2096825E-7 45.000004 2 GCGACGT 20 7.0286234E-4 45.0 17 TACTTCG 20 7.0286234E-4 45.0 14 TAGCCGT 20 7.0286234E-4 45.0 44 ATCAAGT 25 3.8869406E-5 45.0 11 CGCCTCT 20 7.0286234E-4 45.0 39 AACGGCC 25 3.8869406E-5 45.0 17 CCGTATA 20 7.0286234E-4 45.0 17 CGCTCCG 25 3.8869406E-5 45.0 10 TTAAGCG 20 7.0286234E-4 45.0 1 GCTTACG 25 3.8869406E-5 45.0 1 CCTCACG 25 3.8869406E-5 45.0 24 ACGTGAC 20 7.0286234E-4 45.0 20 CGAATAT 20 7.0286234E-4 45.0 14 ACGTCGC 20 7.0286234E-4 45.0 20 TCGAGAG 25 3.8869406E-5 45.0 1 GCTACGA 20 7.0286234E-4 45.0 10 ATAGTCC 20 7.0286234E-4 45.0 37 TTCGAAC 20 7.0286234E-4 45.0 17 >>END_MODULE