##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935797.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1826980 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05395680303014 33.0 31.0 34.0 30.0 34.0 2 32.11320977788481 33.0 31.0 34.0 30.0 34.0 3 32.06868055479534 33.0 31.0 34.0 30.0 34.0 4 35.774782975183086 37.0 35.0 37.0 35.0 37.0 5 34.84535572365324 37.0 35.0 37.0 33.0 37.0 6 35.349871372428815 37.0 35.0 37.0 33.0 37.0 7 35.934924848657346 37.0 35.0 37.0 35.0 37.0 8 35.93940710899955 37.0 35.0 37.0 35.0 37.0 9 37.81395964925724 39.0 38.0 39.0 35.0 39.0 10 37.46433732170029 39.0 37.0 39.0 35.0 39.0 11 37.38073158983678 39.0 37.0 39.0 35.0 39.0 12 37.366345006513484 39.0 37.0 39.0 35.0 39.0 13 37.341635376413535 39.0 37.0 39.0 34.0 39.0 14 38.48764956376096 40.0 38.0 41.0 34.0 41.0 15 38.57835115874284 40.0 38.0 41.0 34.0 41.0 16 38.56744189865242 40.0 38.0 41.0 34.0 41.0 17 38.53647877918751 40.0 38.0 41.0 34.0 41.0 18 38.409053738957184 40.0 38.0 41.0 34.0 41.0 19 38.22641791371553 40.0 37.0 41.0 34.0 41.0 20 38.1390097319073 40.0 36.0 41.0 34.0 41.0 21 38.03197845625021 40.0 36.0 41.0 34.0 41.0 22 38.08389144927695 40.0 36.0 41.0 34.0 41.0 23 38.081402642612396 40.0 36.0 41.0 34.0 41.0 24 38.03305235963174 40.0 36.0 41.0 34.0 41.0 25 37.88576776976212 40.0 36.0 41.0 34.0 41.0 26 37.909968363091004 40.0 36.0 41.0 34.0 41.0 27 37.92114089918883 40.0 36.0 41.0 34.0 41.0 28 37.79941488138896 40.0 35.0 41.0 34.0 41.0 29 37.71947804573668 40.0 35.0 41.0 33.0 41.0 30 37.545638704309845 40.0 35.0 41.0 33.0 41.0 31 37.410474663105234 40.0 35.0 41.0 33.0 41.0 32 37.17556240352932 40.0 35.0 41.0 32.0 41.0 33 36.85824365893442 40.0 35.0 41.0 31.0 41.0 34 36.5924142574084 40.0 35.0 41.0 30.0 41.0 35 36.44068736384635 40.0 35.0 41.0 30.0 41.0 36 36.341189832401014 40.0 35.0 41.0 30.0 41.0 37 36.303099650789825 40.0 35.0 41.0 30.0 41.0 38 36.189653417114584 39.0 35.0 41.0 29.0 41.0 39 36.106264983743664 39.0 35.0 41.0 29.0 41.0 40 35.96914087729477 39.0 35.0 41.0 28.0 41.0 41 35.86027050104544 39.0 35.0 41.0 27.0 41.0 42 35.86421854645371 39.0 35.0 41.0 27.0 41.0 43 35.756888964301744 39.0 35.0 41.0 27.0 41.0 44 35.59573011198809 39.0 35.0 41.0 26.0 41.0 45 35.53661671173193 39.0 35.0 41.0 26.0 41.0 46 35.41470678387284 39.0 35.0 41.0 25.0 41.0 47 35.31718738026689 38.0 35.0 41.0 24.0 41.0 48 35.26674238360573 38.0 35.0 41.0 24.0 41.0 49 35.240377015621405 38.0 35.0 40.0 24.0 41.0 50 35.122593569716145 38.0 35.0 40.0 24.0 41.0 51 34.04857798114922 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 11.0 9 31.0 10 42.0 11 46.0 12 47.0 13 31.0 14 49.0 15 84.0 16 126.0 17 256.0 18 517.0 19 997.0 20 1844.0 21 3004.0 22 4558.0 23 7054.0 24 11894.0 25 19590.0 26 27921.0 27 30740.0 28 29188.0 29 27939.0 30 29287.0 31 34340.0 32 42537.0 33 57863.0 34 98699.0 35 124297.0 36 127972.0 37 193354.0 38 343977.0 39 608268.0 40 415.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.83125157363518 19.635628195163605 22.461931712443487 18.07118851875773 2 37.671622021040186 22.624002452134125 22.961170894043722 16.743204632781968 3 29.699011483431676 22.768120066995806 31.718628556415506 15.814239893157014 4 25.47729039179411 23.797687987826905 32.38771086711403 18.33731075326495 5 23.480224195119813 28.80743084215481 29.967323123405837 17.745021839319534 6 24.34613405729674 31.639700489332125 29.137538451433514 14.876627001937623 7 75.26223603980338 5.228738136159126 14.89835685119706 4.6106689728404255 8 76.39990585556492 4.71866139749751 14.246242432867353 4.635190314070215 9 70.34061675552003 6.678288760687036 16.137834021171553 6.843260462621376 10 35.73793911263397 27.617817381690003 22.66987049666663 13.974373009009403 11 25.479808208081096 24.131736526946106 31.668272230675758 18.720183034297037 12 22.673701956233785 21.66690385225892 34.94367754436283 20.71571664714447 13 21.933682908406222 22.627779176564605 36.49240823654337 18.946129678485807 14 19.12336205103504 25.776746324535573 34.924246570843685 20.1756450535857 15 18.33621605053148 24.963820074658727 37.060285279532344 19.639678595277452 16 21.624374651063505 25.830167817929038 33.50480027148628 19.040657259521176 17 21.836309100263822 26.03022474247118 31.99088112623017 20.142585031034823 18 22.99948548971527 24.769565074603992 32.52947487109875 19.70147456458199 19 21.59454400157637 27.48360682656625 30.57225585392287 20.349593317934513 20 23.443770594095174 26.705273183067142 30.92557116115119 18.925385061686498 21 22.293128550941994 27.032698770648828 32.5233445357913 18.150828142617872 22 22.494225443080932 23.16150149426923 32.80172744091342 21.542545621736416 23 21.14664637817601 25.747134615595137 32.61349330589278 20.492725700336074 24 20.9693592704901 24.224731524154617 33.571139257134725 21.23476994822056 25 21.323057723675138 26.84435516535485 31.204118271683324 20.628468839286693 26 20.89382478188048 26.001379325444173 31.000886709214114 22.10390918346123 27 21.293555485008046 24.97498604254015 31.22404186143253 22.507416611019277 28 19.508314267260726 26.315668480224197 31.412330731589837 22.76368652092524 29 20.770451783818103 26.336467832160178 30.33777052841301 22.55530985560871 30 22.071889128507156 25.61839757413874 30.66289724025441 21.646816057099695 31 22.89537925976201 25.321459457684263 28.987071560717688 22.796089721836037 32 21.997832488587722 26.238218261830998 28.774918170970672 22.9890310786106 33 21.630942867464338 25.69453414925177 28.794075468806447 23.880447514477442 34 19.56272099311432 26.36509430864049 30.576744135130106 23.495440563115086 35 19.694687407634458 26.680095020197264 30.41412604407273 23.211091528095544 36 20.610187303637698 28.09505303834744 29.391235809915816 21.90352384809905 37 20.371432637467297 26.235590975270668 30.073126142595978 23.31985024466606 38 19.861739044762395 27.40331038106602 29.753472944421944 22.98147762974964 39 20.45063438023405 25.665798202498113 29.590471707407858 24.293095709859987 40 22.096684145420312 24.836560881892524 31.180746368323682 21.886008604363486 41 19.855991855411663 25.615387141621692 30.90931482555912 23.619306177407527 42 21.609213018204905 25.389385762296246 30.8670045649104 22.134396654588446 43 21.459786095085878 24.84438800643685 30.522994230916595 23.172831667560672 44 22.047805668370753 24.626213751655737 28.96052501943097 24.365455560542536 45 21.554149470711227 24.04525501100176 28.93414268355428 25.466452834732728 46 21.688469496108333 24.69233379675749 28.936715234977946 24.682481472156237 47 20.065408488324994 25.16431488029426 31.212219071911022 23.558057559469724 48 20.387032151419284 24.893102278076388 31.097111079486368 23.622754491017965 49 21.463562819516362 23.61498210161031 31.025134374760533 23.896320704112796 50 19.88106054800819 23.95176739756319 31.988363309943185 24.178808744485437 51 20.015763719362006 23.264622491762363 30.291026721693726 26.42858706718191 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 897.0 1 1468.5 2 2040.0 3 19162.5 4 36285.0 5 24334.0 6 12383.0 7 12362.5 8 12342.0 9 12374.5 10 12407.0 11 12274.5 12 12142.0 13 11669.0 14 11196.0 15 10932.0 16 10668.0 17 10283.0 18 9898.0 19 9584.0 20 9270.0 21 9290.5 22 9311.0 23 9331.0 24 9351.0 25 10686.0 26 13477.5 27 14934.0 28 18197.5 29 21461.0 30 25202.0 31 28943.0 32 32144.5 33 35346.0 34 41302.0 35 47258.0 36 51671.0 37 56084.0 38 61796.0 39 67508.0 40 73365.5 41 79223.0 42 85538.0 43 91853.0 44 101061.0 45 110269.0 46 138550.5 47 166832.0 48 171493.0 49 176154.0 50 173427.0 51 170700.0 52 151068.0 53 131436.0 54 117719.0 55 104002.0 56 95346.0 57 86690.0 58 81194.0 59 75698.0 60 67968.5 61 60239.0 62 52306.0 63 44373.0 64 38491.5 65 32610.0 66 26973.0 67 21336.0 68 18344.0 69 15352.0 70 12747.5 71 10143.0 72 9277.5 73 8412.0 74 6692.0 75 3779.5 76 2587.0 77 1848.5 78 1110.0 79 909.0 80 708.0 81 513.0 82 318.0 83 206.0 84 94.0 85 74.5 86 55.0 87 43.0 88 31.0 89 26.5 90 22.0 91 17.0 92 12.0 93 6.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1826980.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.742682996492352 #Duplication Level Percentage of deduplicated Percentage of total 1 73.6354397089672 21.901155405711364 2 10.019895527522792 5.960371526661638 3 3.693942850701163 3.296033136466919 4 2.0807785967807297 2.4755175275974173 5 1.2578731545612745 1.8706261242956908 6 0.907997393907736 1.6203767189183396 7 0.7395810074628626 1.5397986418636056 8 0.5726962192174078 1.362681768117844 9 0.5053730424180104 1.3528035176050592 >10 5.931555142614907 39.61529885759782 >50 0.6007809279480205 11.150571027117461 >100 0.0472783618165682 2.6160080509142163 >500 0.003404033040686206 0.6783420067793957 >1k 0.002647581253867049 2.162144837529019 >5k 5.673388401143676E-4 1.196210568671427 >10k+ 1.891129467047892E-4 1.202060284152775 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21371 1.169744605852281 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTT 8706 0.4765240998806774 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTC 6338 0.3469112962375067 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTC 6223 0.34061675552003856 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCT 4961 0.27154101303790956 No Hit CGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTG 4836 0.264699120953705 No Hit CGTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCT 4177 0.2286286658857787 No Hit GCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGC 3324 0.18193959430316697 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGC 2854 0.15621408006655793 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGC 2850 0.15599513951986338 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCG 2721 0.1489343068889643 No Hit CTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGCT 2294 0.1255624035293216 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCC 2072 0.11341120318777435 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTC 2059 0.1126996464110171 No Hit GAACTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCT 2020 0.11056497608074528 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6420541002090883E-4 0.0 0.0 0.1341558199870825 0.0 2 1.6420541002090883E-4 0.0 0.0 0.5752115513032436 0.0 3 1.6420541002090883E-4 0.0 0.0 1.0568807540312428 0.0 4 1.6420541002090883E-4 0.0 0.0 1.7034121884202345 0.0 5 1.6420541002090883E-4 0.0 0.0 3.2215459392002104 0.0 6 1.6420541002090883E-4 0.0 0.0 4.750681452451587 0.0 7 1.6420541002090883E-4 0.0 0.0 5.851952402325149 0.0 8 1.6420541002090883E-4 0.0 0.0 7.253117166033563 0.0 9 1.6420541002090883E-4 0.0 0.0 8.024937328268509 0.0 10 1.6420541002090883E-4 0.0 0.0 9.252920119541539 0.0 11 2.189405466945451E-4 0.0 0.0 10.373731513207588 0.0 12 2.7367568336818135E-4 0.0 0.0 11.416654807387054 0.0 13 2.7367568336818135E-4 0.0 0.0 11.890661090980744 0.0 14 2.7367568336818135E-4 0.0 0.0 12.14933934690035 0.0 15 2.7367568336818135E-4 0.0 0.0 12.446441668764846 0.0 16 2.7367568336818135E-4 0.0 0.0 12.912894503497576 0.0 17 2.7367568336818135E-4 0.0 0.0 13.453075567329691 0.0 18 2.7367568336818135E-4 0.0 0.0 14.098129153028495 0.0 19 3.2841082004181766E-4 0.0 0.0 14.52391378121271 0.0 20 3.2841082004181766E-4 0.0 0.0 14.964422161162137 0.0 21 3.831459567154539E-4 0.0 0.0 15.458735180461746 0.0 22 3.831459567154539E-4 0.0 0.0 16.015500990705974 0.0 23 3.831459567154539E-4 0.0 0.0 16.57478461723719 0.0 24 3.831459567154539E-4 0.0 0.0 17.010914186252723 0.0 25 4.378810933890902E-4 0.0 0.0 17.42296029513186 0.0 26 4.378810933890902E-4 0.0 0.0 17.80670833835072 0.0 27 4.378810933890902E-4 0.0 0.0 18.224009020350525 0.0 28 4.378810933890902E-4 0.0 0.0 18.6583870649925 0.0 29 4.378810933890902E-4 0.0 0.0 19.10152273150226 0.0 30 4.378810933890902E-4 0.0 0.0 19.686860283090127 0.0 31 4.926162300627264E-4 0.0 0.0 20.153805734052916 0.0 32 5.473513667363627E-4 0.0 0.0 20.630001423113555 0.0 33 5.473513667363627E-4 0.0 0.0 21.095906906479545 0.0 34 6.020865034099991E-4 0.0 0.0 21.572321536086875 0.0 35 6.020865034099991E-4 0.0 0.0 22.052841300944728 0.0 36 6.020865034099991E-4 0.0 0.0 22.484318383343002 0.0 37 6.020865034099991E-4 0.0 0.0 22.94666608282521 0.0 38 6.020865034099991E-4 0.0 0.0 23.414104150018062 0.0 39 7.662919134309078E-4 0.0 0.0 24.0125781344076 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCGA 20 7.034381E-4 45.0 18 CGTTTTT 13800 0.0 43.858692 1 CGACGGT 90 0.0 42.500004 28 TAACGCG 85 0.0 42.35294 1 CGTTTCT 1085 0.0 40.02304 1 CCGGTAT 45 1.929402E-8 40.000004 42 CGTTATT 330 0.0 39.545452 1 TCCGATC 40 3.4597178E-7 39.375 14 GCTATCG 40 3.4597178E-7 39.375 1 CGAATAT 230 0.0 39.130436 14 TTGTACG 75 0.0 39.0 1 TTACGCG 75 0.0 39.0 1 TATAGCG 145 0.0 38.793102 1 CACGACC 425 0.0 38.64706 27 CGTAGCG 35 6.250313E-6 38.571426 2 CGTTCTG 765 0.0 38.52941 1 AACGAGC 995 0.0 38.44221 15 ACAACGA 1010 0.0 38.31683 13 CGGTCTA 100 0.0 38.250004 31 CGTTTTC 720 0.0 38.125004 1 >>END_MODULE