##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935796.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1047685 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.970301187857036 33.0 31.0 34.0 30.0 34.0 2 32.06443921598572 33.0 31.0 34.0 30.0 34.0 3 32.01162944969146 33.0 31.0 34.0 30.0 34.0 4 35.737992812725196 37.0 35.0 37.0 35.0 37.0 5 34.80016989839503 37.0 35.0 37.0 33.0 37.0 6 35.23912912755265 37.0 35.0 37.0 33.0 37.0 7 35.749867565155554 37.0 35.0 37.0 33.0 37.0 8 35.67649627512086 37.0 35.0 37.0 33.0 37.0 9 37.57341376463345 39.0 37.0 39.0 35.0 39.0 10 37.3344058567222 39.0 37.0 39.0 34.0 39.0 11 37.22946687219918 39.0 37.0 39.0 34.0 39.0 12 37.115065119764054 39.0 37.0 39.0 34.0 39.0 13 37.00450230746837 39.0 37.0 39.0 33.0 39.0 14 38.083164309883216 40.0 37.0 41.0 33.0 41.0 15 38.11095319681011 40.0 37.0 41.0 33.0 41.0 16 38.22137188181562 40.0 37.0 41.0 33.0 41.0 17 38.12908364632499 40.0 37.0 41.0 33.0 41.0 18 37.998114891403425 40.0 37.0 41.0 33.0 41.0 19 37.850188749481 40.0 37.0 41.0 33.0 41.0 20 37.61176021418652 40.0 35.0 41.0 33.0 41.0 21 37.63354443367997 39.0 35.0 41.0 33.0 41.0 22 37.6793740484974 39.0 35.0 41.0 33.0 41.0 23 37.6854512568186 39.0 35.0 41.0 33.0 41.0 24 37.60915065119764 39.0 35.0 41.0 33.0 41.0 25 37.51877902232064 39.0 35.0 41.0 33.0 41.0 26 37.459939771973445 39.0 35.0 41.0 33.0 41.0 27 37.453126655435554 39.0 35.0 41.0 33.0 41.0 28 37.28634370063521 39.0 35.0 41.0 33.0 41.0 29 37.16992321165236 39.0 35.0 41.0 32.0 41.0 30 37.015640197196674 39.0 35.0 41.0 32.0 41.0 31 36.91945861590077 39.0 35.0 41.0 31.0 41.0 32 36.60834029312245 39.0 35.0 41.0 31.0 41.0 33 36.321402902589995 39.0 35.0 41.0 30.0 41.0 34 36.04053794795191 39.0 35.0 41.0 29.0 41.0 35 35.83893250356739 39.0 35.0 41.0 27.0 41.0 36 35.7879610760868 39.0 35.0 41.0 27.0 41.0 37 35.65610369529009 39.0 35.0 41.0 26.0 41.0 38 35.6132730734906 39.0 35.0 41.0 26.0 41.0 39 35.45044455155891 39.0 35.0 41.0 25.0 41.0 40 35.23928661763794 38.0 35.0 41.0 24.0 41.0 41 35.02786715472685 38.0 34.0 40.0 23.0 41.0 42 35.107137164319425 38.0 35.0 40.0 23.0 41.0 43 35.05669070378978 38.0 35.0 40.0 23.0 41.0 44 35.00420069009292 38.0 35.0 40.0 23.0 41.0 45 34.95367691624868 38.0 34.0 40.0 23.0 41.0 46 34.834985706581655 38.0 34.0 40.0 23.0 41.0 47 34.60356786629569 37.0 34.0 40.0 23.0 41.0 48 34.617405040637216 37.0 34.0 40.0 23.0 41.0 49 34.63122503424216 37.0 34.0 40.0 23.0 41.0 50 34.5192238125009 37.0 34.0 40.0 23.0 41.0 51 33.369193030347866 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 9.0 9 25.0 10 31.0 11 31.0 12 25.0 13 24.0 14 39.0 15 59.0 16 113.0 17 232.0 18 362.0 19 889.0 20 1667.0 21 2852.0 22 4306.0 23 6045.0 24 8393.0 25 12325.0 26 16624.0 27 19009.0 28 18825.0 29 18336.0 30 19874.0 31 23916.0 32 30543.0 33 41277.0 34 68615.0 35 78422.0 36 79529.0 37 111354.0 38 183725.0 39 299998.0 40 207.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.848198647494236 18.255868891890216 19.40573741153114 18.49019504908441 2 35.733450416871484 28.92481996019796 20.11692445725576 15.224805165674798 3 26.761383431088543 28.528994879186016 29.685640244920947 15.023981444804496 4 24.21185757169378 21.233385989109323 37.8295957277235 16.725160711473393 5 26.83010637739397 25.980423505156608 28.60344473768356 18.586025379765864 6 22.904880760915734 33.878408109307664 29.49187971575426 13.724831414022345 7 68.97550313309821 4.931348640096975 20.975197697781297 5.117950529023513 8 68.59094097939743 9.325512916573206 16.70740728367782 5.376138820351537 9 62.899917437015894 5.8073753084180835 17.62991738929163 13.66278986527439 10 39.60207505118428 19.318688346210934 25.024506411755443 16.054730190849348 11 29.99613433427032 21.861437359511683 29.121634842533776 19.020793463684218 12 25.095901917083857 18.785035578441995 33.73599889279698 22.383063611677173 13 24.513188601535767 19.07901707097076 38.13379021366155 18.274004113831925 14 19.30303478621914 26.038265318297004 33.9074244644144 20.751275431069452 15 17.6622744431771 22.352520079985876 39.41280060323475 20.572404873602277 16 21.127724459164728 23.80333783532264 31.92343118399137 23.14550652152126 17 21.529467349441862 24.343385655039445 32.43207643518806 21.695070560330635 18 21.22345934130965 23.87606962016255 32.08149396049385 22.81897707803395 19 21.103766876494365 25.213971756778044 30.168705288326166 23.51355607840143 20 22.73326429222524 25.84536382595914 32.66019843750746 18.761173444308167 21 22.21841488615376 26.999909323890293 32.98290993953335 17.798765850422598 22 21.288268897617126 21.158936130611778 34.25103919594153 23.301755775829566 23 21.449099681679133 23.863088619193746 33.70345094183843 20.98436075728869 24 22.959763669423538 23.39959052577826 31.06802139956189 22.572624405236308 25 22.09375909743864 28.134887871831705 28.615566701823543 21.15578632890611 26 20.947231276576453 22.906407937500298 31.343294978929737 24.803065806993516 27 23.59478278299298 23.31836382118671 29.929415807232136 23.157437588588174 28 20.625951502598586 23.651001971012278 31.870170900604666 23.852875625784467 29 24.794666335778405 23.098068598863208 29.82480421118943 22.282460854168953 30 22.3601559629087 26.826574781542163 29.99307998110119 20.82018927444795 31 23.152092470542197 23.964741310603856 27.438209003660454 25.444957215193497 32 24.07078463469459 28.199601979602644 26.601888926538038 21.127724459164728 33 22.050902704534284 25.27649054820867 26.324801824976017 26.347804922281032 34 22.575392412795832 27.90180254561247 27.42704152488582 22.09576351670588 35 20.324525024220065 31.469000701546747 26.26104220257043 21.94543207166276 36 22.683249259080736 30.154865250528545 25.227334551892984 21.934550938497736 37 20.053069386313634 30.743496375341827 28.23148179080544 20.9719524475391 38 20.870395204665524 26.77751423376301 25.799166734276046 26.552923827295416 39 22.80189178999413 27.867250175386687 26.601507132391895 22.729350902227292 40 21.860196528536726 25.83085564840577 29.720765306365944 22.588182516691564 41 19.92526379589285 29.6641643242005 27.825348267847684 22.585223612058968 42 20.713955053284145 26.352004657888585 31.335181853324233 21.598858435503036 43 22.835966917537238 25.170733569727545 28.365491536101022 23.627807976634198 44 22.664064103237138 22.87557806019939 29.3330533509595 25.127304485603975 45 21.154163703785013 22.323121930733 28.69307091349022 27.82964345199177 46 24.89479185060395 24.38605115087073 27.743262526427316 22.97589447209801 47 20.11043395677136 23.60805012957139 33.822188921288365 22.45932699236889 48 20.79346368421806 25.110505543173762 29.17670864811465 24.919322124493526 49 20.46311629926934 22.876914339710886 33.4219732075958 23.23799615342398 50 20.66985782940483 22.64669246958771 32.0548638188005 24.62858588220696 51 20.264583343275888 22.703866142972362 29.60508168008514 27.426468833666608 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 425.0 1 891.5 2 1358.0 3 13497.5 4 25637.0 5 16817.0 6 7997.0 7 7672.0 8 7347.0 9 7238.5 10 7130.0 11 6924.0 12 6718.0 13 6434.0 14 6150.0 15 5809.5 16 5469.0 17 5157.0 18 4845.0 19 4645.0 20 4445.0 21 4411.0 22 4377.0 23 4484.0 24 4591.0 25 5037.5 26 6196.0 27 6908.0 28 8422.0 29 9936.0 30 11072.5 31 12209.0 32 13852.0 33 15495.0 34 18476.5 35 21458.0 36 22861.5 37 24265.0 38 27114.5 39 29964.0 40 33409.5 41 36855.0 42 42724.0 43 48593.0 44 93203.0 45 137813.0 46 112272.5 47 86732.0 48 87283.5 49 87835.0 50 78056.0 51 68277.0 52 63078.0 53 57879.0 54 54997.0 55 52115.0 56 51107.0 57 50099.0 58 47783.0 59 45467.0 60 42823.5 61 40180.0 62 37434.5 63 34689.0 64 31382.5 65 28076.0 66 24087.0 67 20098.0 68 17705.0 69 15312.0 70 12929.5 71 10547.0 72 8410.5 73 6274.0 74 5272.5 75 3192.5 76 2114.0 77 1643.5 78 1173.0 79 858.0 80 543.0 81 426.0 82 309.0 83 211.5 84 114.0 85 85.0 86 56.0 87 39.0 88 22.0 89 14.5 90 7.0 91 6.0 92 5.0 93 6.0 94 7.0 95 11.0 96 15.0 97 7.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1047685.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.457938734090206 #Duplication Level Percentage of deduplicated Percentage of total 1 74.24961404902135 24.84239037882 2 7.962978991191301 5.32849726456252 3 3.355655928008667 3.368199913560018 4 1.882190592475961 2.518968701157666 5 1.440394128543016 2.409630925286774 6 1.1848483937806005 2.3785550980977908 7 1.0157095203457387 2.3788482832351914 8 0.9240157208720453 2.4732529102618472 9 0.8526212217697335 2.5674253741221196 >10 7.046443162110877 37.30509685349696 >50 0.05103215949539639 1.1348187903009657 >100 0.02622846429375003 1.8054644620454732 >500 0.002280736025245704 0.4908558812898828 >1k 0.004276380047335696 3.4092831148587237 >5k 5.70184006311426E-4 1.135855389506398 >10k+ 0.001140368012622852 6.4528566593977015 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 24757 2.3630194190047584 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15566 1.485751919708691 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGC 13670 1.3047814944377365 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCG 13657 1.3035406634627775 No Hit GAACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 6580 0.6280513704023634 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTT 5328 0.5085498026601507 No Hit GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 4550 0.43429084123567674 No Hit CGTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 3753 0.35821835761703186 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTT 3393 0.32385688446431893 No Hit CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 3100 0.29589046325947205 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCT 2847 0.27174198351603773 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCT 2763 0.2637243064470714 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTC 2450 0.23384891451151824 No Hit ACCATACGGAAAGAGTTCCGAACCCGCATGGTTATGAACAATGGACTCAAC 2289 0.21848170012933277 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACACAAAT 1954 0.18650644039000272 No Hit CGTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 1877 0.17915690307678359 No Hit CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 1626 0.15519932040641987 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACACAAATCGTA 1588 0.15157227601807796 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCC 1258 0.12007425896142447 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTC 1201 0.11463369237891159 No Hit CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 1093 0.10432525043309773 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.817941461412543E-4 0.0 0.0 0.11091119945403437 0.0 2 3.817941461412543E-4 0.0 0.0 0.7815326171511475 0.0 3 3.817941461412543E-4 0.0 0.0 1.283019228107685 0.0 4 3.817941461412543E-4 0.0 0.0 2.3382027995055767 0.0 5 3.817941461412543E-4 0.0 0.0 5.7758772913614305 0.0 6 3.817941461412543E-4 0.0 0.0 7.472475028276629 0.0 7 5.726912192118815E-4 0.0 0.0 8.629788533767305 0.0 8 5.726912192118815E-4 0.0 0.0 9.84828455117712 0.0 9 5.726912192118815E-4 0.0 0.0 10.463450369147216 0.0 10 6.68139755747195E-4 0.0 0.0 12.643781289223384 0.0 11 6.68139755747195E-4 0.0 0.0 13.506731508039152 0.0 12 6.68139755747195E-4 0.0 0.0 15.513727885767192 0.0 13 6.68139755747195E-4 0.0 0.0 15.903253363367806 0.0 14 6.68139755747195E-4 0.0 0.0 16.151324109823086 0.0 15 6.68139755747195E-4 0.0 0.0 16.50620176866138 0.0 16 6.68139755747195E-4 0.0 0.0 16.874633119687694 0.0 17 6.68139755747195E-4 0.0 0.0 17.233901411206613 0.0 18 6.68139755747195E-4 0.0 0.0 17.61970439588235 0.0 19 6.68139755747195E-4 0.0 0.0 18.078239165397996 0.0 20 6.68139755747195E-4 0.0 0.0 18.370311687196057 0.0 21 6.68139755747195E-4 0.0 0.0 18.670974577282294 0.0 22 6.68139755747195E-4 0.0 0.0 19.0761536148747 0.0 23 6.68139755747195E-4 0.0 0.0 19.396669800560282 0.0 24 6.68139755747195E-4 0.0 0.0 19.694373786013927 0.0 25 6.68139755747195E-4 0.0 0.0 19.960770651483987 0.0 26 6.68139755747195E-4 0.0 0.0 20.216954523544768 0.0 27 6.68139755747195E-4 0.0 0.0 20.525825987773043 0.0 28 6.68139755747195E-4 0.0 0.0 20.782009859833824 0.0 29 6.68139755747195E-4 0.0 0.0 21.066351050172525 0.0 30 6.68139755747195E-4 0.0 0.0 21.42838734925097 0.0 31 7.635882922825086E-4 0.0 0.0 21.7030882373996 0.0 32 7.635882922825086E-4 0.0 0.0 21.98151161847311 0.0 33 7.635882922825086E-4 0.0 0.0 22.26260755856961 0.0 34 7.635882922825086E-4 0.0 0.0 22.56202961768089 0.0 35 7.635882922825086E-4 0.0 0.0 22.86116533118256 0.0 36 7.635882922825086E-4 0.0 0.0 23.153715095663294 0.0 37 8.590368288178222E-4 0.0 0.0 23.466595398426055 0.0 38 8.590368288178222E-4 0.0 0.0 23.84896223578652 0.0 39 8.590368288178222E-4 0.0 0.0 24.364766127223355 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATCGT 20 7.0330006E-4 45.0 42 CTTATCG 20 7.0330006E-4 45.0 41 CGTTTTT 7615 0.0 43.72948 1 TACGGCT 1685 0.0 41.79525 7 CGATGAA 935 0.0 40.187164 19 AACCCGC 355 0.0 39.929577 21 CCATACG 345 0.0 39.782608 2 AACGGGC 125 0.0 39.6 4 CCGATGA 940 0.0 39.494682 18 GAATCTG 2940 0.0 39.10714 1 ACGGCTG 1840 0.0 38.763584 8 TCCGAAC 360 0.0 38.75 17 CCGCATG 375 0.0 38.4 24 CGTTAGG 135 0.0 38.333336 2 CCCGCAT 370 0.0 38.31081 23 ATACGGA 365 0.0 38.219177 4 AATCTGT 3010 0.0 38.197674 2 GTTTTTT 8885 0.0 38.187958 2 ACCATAC 360 0.0 38.125 1 CATACGA 65 9.094947E-12 38.076927 18 >>END_MODULE