##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935795.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1276954 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10516510383303 33.0 31.0 34.0 30.0 34.0 2 32.17483715153404 33.0 31.0 34.0 30.0 34.0 3 32.13999407966144 33.0 31.0 34.0 30.0 34.0 4 35.821919192077395 37.0 35.0 37.0 35.0 37.0 5 34.92179749622931 37.0 35.0 37.0 33.0 37.0 6 35.387415678246825 37.0 35.0 37.0 33.0 37.0 7 35.962388621673135 37.0 35.0 37.0 35.0 37.0 8 35.96589853667399 37.0 35.0 37.0 35.0 37.0 9 37.83753369346116 39.0 38.0 39.0 35.0 39.0 10 37.45690134491924 39.0 37.0 39.0 35.0 39.0 11 37.38232309072997 39.0 37.0 39.0 35.0 39.0 12 37.274836838288614 39.0 37.0 39.0 34.0 39.0 13 37.21268033147631 39.0 37.0 39.0 34.0 39.0 14 38.24335567295298 40.0 38.0 41.0 33.0 41.0 15 38.39217857495258 40.0 38.0 41.0 34.0 41.0 16 38.41049716747823 40.0 38.0 41.0 34.0 41.0 17 38.398336196918606 40.0 38.0 41.0 34.0 41.0 18 38.32520826905276 40.0 38.0 41.0 34.0 41.0 19 38.1680044856745 40.0 37.0 41.0 34.0 41.0 20 38.11103532312049 40.0 36.0 41.0 34.0 41.0 21 38.0291169454812 40.0 36.0 41.0 34.0 41.0 22 38.08494432845662 40.0 36.0 41.0 34.0 41.0 23 38.095337811698776 40.0 36.0 41.0 34.0 41.0 24 38.055329322747724 40.0 36.0 41.0 34.0 41.0 25 37.89826023490274 40.0 35.0 41.0 34.0 41.0 26 37.91701580479798 40.0 36.0 41.0 34.0 41.0 27 37.92469736576259 40.0 36.0 41.0 34.0 41.0 28 37.81203786510712 40.0 35.0 41.0 34.0 41.0 29 37.75667095290825 40.0 35.0 41.0 34.0 41.0 30 37.60112580406185 40.0 35.0 41.0 33.0 41.0 31 37.49107407157971 40.0 35.0 41.0 33.0 41.0 32 37.3266946186002 40.0 35.0 41.0 33.0 41.0 33 37.07323521442432 40.0 35.0 41.0 32.0 41.0 34 36.85347475320176 40.0 35.0 41.0 31.0 41.0 35 36.722657981415146 40.0 35.0 41.0 31.0 41.0 36 36.610651597473364 40.0 35.0 41.0 31.0 41.0 37 36.56527094946255 40.0 35.0 41.0 30.0 41.0 38 36.46840919876519 39.0 35.0 41.0 30.0 41.0 39 36.39149256746915 39.0 35.0 41.0 30.0 41.0 40 36.262707975385176 39.0 35.0 41.0 30.0 41.0 41 36.140866468173485 39.0 35.0 41.0 29.0 41.0 42 36.15440885106276 39.0 35.0 41.0 30.0 41.0 43 36.064960836490584 39.0 35.0 41.0 29.0 41.0 44 35.947404526709654 39.0 35.0 41.0 29.0 41.0 45 35.91032801494807 39.0 35.0 41.0 29.0 41.0 46 35.797427315314415 39.0 35.0 41.0 29.0 41.0 47 35.6848461260155 39.0 35.0 41.0 28.0 41.0 48 35.6299733584765 38.0 35.0 41.0 28.0 41.0 49 35.59505432458804 38.0 35.0 40.0 28.0 41.0 50 35.48147309926591 38.0 35.0 40.0 27.0 41.0 51 34.3660037871372 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 25.0 9 22.0 10 34.0 11 32.0 12 26.0 13 28.0 14 36.0 15 66.0 16 104.0 17 218.0 18 351.0 19 660.0 20 1240.0 21 1950.0 22 3019.0 23 4494.0 24 6859.0 25 11198.0 26 15802.0 27 17782.0 28 17701.0 29 18152.0 30 19630.0 31 23573.0 32 30754.0 33 43263.0 34 79213.0 35 90251.0 36 87644.0 37 132495.0 38 239025.0 39 431019.0 40 286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.20786966484305 20.549526451226903 23.505388604444637 15.737215279485401 2 35.60652928766424 23.39324674185601 24.383572156867046 16.616651813612705 3 30.69617229751424 22.924240027440298 30.337506284486366 16.042081390559098 4 27.002068986040218 24.57825418926602 30.446124136029955 17.973552688663805 5 24.00384038892552 29.7572974437607 28.395854510029334 17.843007657284442 6 24.8257963873405 32.752393586613145 28.062326442456033 14.359483583590324 7 77.59292817125754 5.202536661461572 12.549943067643785 4.654592099637105 8 79.23347277975557 4.613322014731932 11.77152818347411 4.381677022038382 9 73.88981905377953 6.13851399502253 13.735107137766905 6.2365598134310245 10 38.46364082026447 25.717762738516814 21.152367273997342 14.666229167221372 11 28.658040931779844 24.754454741517705 27.96529867168277 18.62220565501968 12 25.608831641546992 21.569375247659664 32.91582938774616 19.905963723047186 13 24.252400634635233 22.12945806975036 34.33287338463249 19.285267910981915 14 19.98075106855846 25.34468743588258 34.47477356271252 20.199787932846444 15 19.499762716589633 24.6320540912202 36.19433432997587 19.6738488622143 16 23.95301631852048 24.514273810959516 32.38519163572063 19.147518234799374 17 23.99428640342565 24.54794769427873 30.227165583098532 21.23060031919709 18 24.71428101560432 24.066332851457453 31.262833273555664 19.956552859382562 19 23.303658549955596 26.688901871171556 29.638029247725445 20.369410331147403 20 23.4918407397604 26.896348654689206 30.122150053956524 19.48966055159387 21 23.49176242840384 26.19718486335451 31.80913329689245 18.501919411349196 22 22.167439077680168 23.67156530305712 32.276730406890145 21.88426521237257 23 20.821971660686287 25.644698242849785 32.18001588154311 21.353314214920818 24 21.65786708056829 24.77426751472645 31.84640950261325 21.72145590209201 25 22.640283048567138 25.87955400116214 29.729340289470095 21.750822660800623 26 21.144066270202373 25.267863995100843 30.208997348377466 23.37907238631932 27 21.417999395436325 24.58522389999953 31.532067717396238 22.4647089871679 28 20.026249966717675 25.21469058399911 31.419221052598605 23.33983839668461 29 21.09895892882594 25.594500663297193 30.47556920609513 22.83097120178174 30 22.993388955279517 23.929287977483916 31.10354797432014 21.973775092916426 31 23.661306515348244 24.249581425799207 29.29557368550472 22.793538373347825 32 23.677203720729175 24.731822759472934 29.00629153438573 22.58468198541216 33 23.559345129111932 24.37644582342042 27.958877140445153 24.105331907022492 34 20.767153711096874 25.742117570405824 30.13475818236209 23.35597053613521 35 21.989202430158016 26.753665363043616 28.400944748205497 22.85618745859287 36 23.15267425451504 27.91353486499905 26.8571146650545 22.07667621543141 37 21.917390916195885 28.51590581963015 27.13465011269004 22.43205315148392 38 22.103458699373665 27.027050308781682 27.296597998048483 23.572892993796174 39 21.721377590735454 26.26570730034128 27.23034659040185 24.78256851852142 40 24.037905829027515 24.984220261653906 28.750918200655622 22.22695570866296 41 21.5089188803982 26.383800826028185 28.325452600485217 23.7818276930884 42 21.643301168248815 26.120048177146554 29.090006374544426 23.146644280060205 43 22.16172234865156 25.16073405933182 29.2058288708912 23.471714721125426 44 22.394463700336896 24.744509199235054 28.51018909060154 24.350838009826507 45 21.635704966662857 23.987238381335587 28.277682672985872 26.099373979015688 46 22.626108693030446 24.547164580713165 28.350042366443894 24.47668435981249 47 21.213215198041592 25.56286287524844 30.092313427108575 23.131608499601395 48 20.981883450774262 25.790670611470734 29.324940444213336 23.90250549354166 49 22.25319001310932 24.277930136872587 29.71978630397023 23.74909354604786 50 20.401987855474825 24.486943147521366 30.442835059054595 24.668233937949214 51 20.384994291102107 23.904306654742456 29.318362290262613 26.392336763892825 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 687.0 1 1170.0 2 1653.0 3 11085.0 4 20517.0 5 13594.0 6 6671.0 7 6548.5 8 6426.0 9 6389.0 10 6352.0 11 6307.0 12 6262.0 13 6277.0 14 6292.0 15 5854.0 16 5416.0 17 5325.0 18 5234.0 19 5067.5 20 4901.0 21 5030.5 22 5160.0 23 5405.0 24 5650.0 25 6790.0 26 9309.5 27 10689.0 28 11687.0 29 12685.0 30 15981.5 31 19278.0 32 22221.5 33 25165.0 34 29009.5 35 32854.0 36 35621.5 37 38389.0 38 42373.0 39 46357.0 40 50078.5 41 53800.0 42 58079.5 43 62359.0 44 66215.5 45 70072.0 46 76107.5 47 82143.0 48 98557.0 49 114971.0 50 119239.0 51 123507.0 52 120166.5 53 116826.0 54 102056.0 55 87286.0 56 79404.0 57 71522.0 58 65747.5 59 59973.0 60 52839.5 61 45706.0 62 40694.5 63 35683.0 64 30726.0 65 25769.0 66 22133.5 67 18498.0 68 15506.5 69 12515.0 70 10473.5 71 8432.0 72 7011.5 73 5591.0 74 4684.0 75 2822.0 76 1867.0 77 1571.5 78 1276.0 79 855.5 80 435.0 81 287.5 82 140.0 83 134.5 84 129.0 85 84.5 86 40.0 87 43.5 88 47.0 89 29.0 90 11.0 91 7.0 92 3.0 93 4.5 94 6.0 95 4.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1276954.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.587918669792607 #Duplication Level Percentage of deduplicated Percentage of total 1 73.99435474227757 22.63333304880569 2 9.669398803253797 5.915335683594342 3 3.574198648768883 3.2798189273467573 4 1.9109503764156468 2.338079787832455 5 1.2410127874803112 1.8979999105810184 6 0.9469922239548342 1.7379912676353897 7 0.7420817295017894 1.588911491183784 8 0.6301886400057874 1.542092709369939 9 0.5281104524102418 1.453841961029267 >10 6.255686474775344 42.90276380823863 >50 0.45887583657408776 8.572292624722417 >100 0.04242342372237173 2.4294606792250053 >500 0.0020821312215695 0.4505930277913168 >1k 0.003383463235050437 2.2699220850554447 >5k 0.0 0.0 >10k+ 2.602664026961875E-4 0.9875629875885663 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12405 0.9714523780809645 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTT 3664 0.28693281042230184 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTC 3195 0.2502047841973947 No Hit CGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTG 3014 0.2360304286607035 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTC 2798 0.21911517564454164 No Hit CCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 2789 0.21841037343553488 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 2273 0.17800171345248145 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCT 2168 0.16977902101406941 No Hit CTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 1744 0.13657500583419607 Illumina Single End Adapter 2 (95% over 22bp) CGTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCT 1657 0.1297619178137975 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCG 1477 0.11566587363366261 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGC 1430 0.11198523987551627 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCC 1301 0.1018830748797529 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3493406966891523E-4 0.0 0.0 0.14440614148982658 0.0 2 2.3493406966891523E-4 0.0 0.0 0.6493577685648817 0.0 3 2.3493406966891523E-4 0.0 0.0 1.099178200624298 0.0 4 2.3493406966891523E-4 0.0 0.0 1.5793051276710046 0.0 5 2.3493406966891523E-4 0.0 0.0 2.793366088363402 0.0 6 2.3493406966891523E-4 0.0 0.0 3.909616164716975 0.0 7 2.3493406966891523E-4 0.0 0.0 4.788191273922162 0.0 8 2.3493406966891523E-4 0.0 0.0 5.979228695787006 0.0 9 2.3493406966891523E-4 0.0 0.0 6.599298016999829 0.0 10 2.3493406966891523E-4 0.0 0.0 7.646164231444516 0.0 11 2.3493406966891523E-4 0.0 0.0 8.712060105532384 0.0 12 2.3493406966891523E-4 0.0 0.0 9.645061607544203 0.0 13 2.3493406966891523E-4 0.0 0.0 10.056352852177918 0.0 14 2.3493406966891523E-4 0.0 0.0 10.299039746145906 0.0 15 2.3493406966891523E-4 0.0 0.0 10.56623809471602 0.0 16 2.3493406966891523E-4 0.0 0.0 11.017546442550005 0.0 17 2.3493406966891523E-4 0.0 0.0 11.557816491431954 0.0 18 2.3493406966891523E-4 0.0 0.0 12.180391776054579 0.0 19 2.3493406966891523E-4 0.0 0.0 12.573436474610675 0.0 20 2.3493406966891523E-4 0.0 0.0 12.977679697154322 0.0 21 2.3493406966891523E-4 0.0 0.0 13.441909418820098 0.0 22 2.3493406966891523E-4 0.0 0.0 13.961740203640852 0.0 23 2.3493406966891523E-4 0.0 0.0 14.47021584176094 0.0 24 2.3493406966891523E-4 0.0 0.0 14.882133577247105 0.0 25 2.3493406966891523E-4 0.0 0.0 15.256461861586244 0.0 26 2.3493406966891523E-4 0.0 0.0 15.621784339921406 0.0 27 2.3493406966891523E-4 0.0 0.0 16.044587353968897 0.0 28 2.3493406966891523E-4 0.0 0.0 16.427294953459562 0.0 29 2.3493406966891523E-4 0.0 0.0 16.846887201888244 0.0 30 2.3493406966891523E-4 0.0 0.0 17.384181419221054 0.0 31 3.915567827815254E-4 0.0 0.0 17.81215298280126 0.0 32 3.915567827815254E-4 0.0 0.0 18.23855831925034 0.0 33 3.915567827815254E-4 0.0 0.0 18.659168615314254 0.0 34 3.915567827815254E-4 0.0 0.0 19.100453109509036 0.0 35 3.915567827815254E-4 0.0 0.0 19.566562303732162 0.0 36 3.915567827815254E-4 0.0 0.0 19.977383680226538 0.0 37 4.6986813933783047E-4 0.0 0.0 20.415144163376283 0.0 38 4.6986813933783047E-4 0.0 0.0 20.936149618545382 0.0 39 4.6986813933783047E-4 0.0 0.0 21.673451040522995 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 25 3.891051E-5 44.999996 1 CGTTTTT 7180 0.0 43.401814 1 CGGTCTA 60 3.6379788E-12 41.250004 31 CTCGTAG 50 1.0822987E-9 40.499996 1 TCGATAG 40 3.4586265E-7 39.375 1 TTGCGAG 115 0.0 39.130432 1 CGTTCTG 435 0.0 36.206894 1 GCGCGAC 280 0.0 36.160713 9 ACAACGA 305 0.0 36.14754 13 TTAACGG 75 1.8189894E-12 36.0 2 CGTAAGG 225 0.0 36.0 2 ACTGCGC 25 0.0021071965 35.999996 27 GTCGAGT 25 0.0021071965 35.999996 14 TAGACGG 100 0.0 35.999996 2 CGTCCCG 25 0.0021071965 35.999996 26 GCGTAGT 25 0.0021071965 35.999996 39 GTTTTTT 8955 0.0 35.72864 2 TACGGGA 515 0.0 35.38835 4 TTGTACG 70 2.1827873E-11 35.357143 1 GTATGCG 70 2.1827873E-11 35.357143 1 >>END_MODULE