##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935794.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 722605 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05254599677556 33.0 31.0 34.0 30.0 34.0 2 32.07187052400689 33.0 31.0 34.0 30.0 34.0 3 32.1103687353395 33.0 31.0 34.0 30.0 34.0 4 35.76899966094893 37.0 35.0 37.0 33.0 37.0 5 34.8407165740619 37.0 35.0 37.0 33.0 37.0 6 35.33031739332 37.0 35.0 37.0 33.0 37.0 7 35.90335660561441 37.0 35.0 37.0 35.0 37.0 8 35.89744881366722 37.0 35.0 37.0 35.0 37.0 9 37.741901868932544 39.0 38.0 39.0 35.0 39.0 10 37.39055638972883 39.0 37.0 39.0 34.0 39.0 11 37.32289701842639 39.0 37.0 39.0 34.0 39.0 12 37.1937407020433 39.0 37.0 39.0 34.0 39.0 13 37.06908615356938 39.0 37.0 39.0 33.0 39.0 14 38.08109409705164 40.0 37.0 41.0 33.0 41.0 15 38.231999501802505 40.0 37.0 41.0 33.0 41.0 16 38.28793462541776 40.0 37.0 41.0 34.0 41.0 17 38.28918565467994 40.0 37.0 41.0 34.0 41.0 18 38.27499256163464 40.0 37.0 41.0 34.0 41.0 19 38.22712962130071 40.0 37.0 41.0 34.0 41.0 20 38.22088969769099 40.0 37.0 41.0 34.0 41.0 21 38.12225351333024 40.0 37.0 41.0 34.0 41.0 22 38.16901488365013 40.0 37.0 41.0 34.0 41.0 23 38.1522048698805 40.0 37.0 41.0 34.0 41.0 24 38.11586413047239 40.0 36.0 41.0 34.0 41.0 25 37.96664014226306 40.0 36.0 41.0 34.0 41.0 26 37.98433860822995 40.0 36.0 41.0 34.0 41.0 27 38.00612229364591 40.0 36.0 41.0 34.0 41.0 28 37.90886445568464 40.0 36.0 41.0 34.0 41.0 29 37.822969672227565 40.0 36.0 41.0 34.0 41.0 30 37.730523591727156 40.0 36.0 41.0 33.0 41.0 31 37.67896291888376 40.0 36.0 41.0 33.0 41.0 32 37.59710630289024 40.0 36.0 41.0 33.0 41.0 33 37.50771860144892 40.0 36.0 41.0 33.0 41.0 34 37.42201756146166 40.0 35.0 41.0 33.0 41.0 35 37.36040160253527 40.0 35.0 41.0 33.0 41.0 36 37.305011728399336 40.0 35.0 41.0 33.0 41.0 37 37.269856975802824 40.0 35.0 41.0 33.0 41.0 38 37.18552321115963 39.0 35.0 41.0 33.0 41.0 39 37.118305298191956 39.0 35.0 41.0 32.0 41.0 40 37.02236768358924 39.0 35.0 41.0 32.0 41.0 41 36.94345873610064 39.0 35.0 41.0 32.0 41.0 42 36.97959050933774 39.0 35.0 41.0 32.0 41.0 43 36.884888701296006 39.0 35.0 41.0 32.0 41.0 44 36.702382352737665 39.0 35.0 41.0 31.0 41.0 45 36.67928951501858 39.0 35.0 41.0 31.0 41.0 46 36.579007895046395 39.0 35.0 41.0 31.0 41.0 47 36.500256710097496 39.0 35.0 41.0 31.0 41.0 48 36.48075781374333 39.0 35.0 41.0 31.0 41.0 49 36.48176527978633 39.0 35.0 40.0 31.0 41.0 50 36.36690861535694 38.0 35.0 40.0 31.0 41.0 51 35.188843143902965 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 18.0 10 22.0 11 17.0 12 23.0 13 18.0 14 27.0 15 34.0 16 31.0 17 64.0 18 173.0 19 259.0 20 506.0 21 781.0 22 1249.0 23 1763.0 24 2509.0 25 3477.0 26 4621.0 27 5753.0 28 6573.0 29 7795.0 30 9892.0 31 12653.0 32 16979.0 33 24763.0 34 46230.0 35 61709.0 36 53124.0 37 81518.0 38 141581.0 39 238289.0 40 146.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.87293888085468 20.526982237875465 25.07773956726012 11.522339314009729 2 32.43985303173933 24.114696134125836 24.93962815092616 18.50582268320867 3 32.67455940659143 23.456660277745105 26.806069706132675 17.062710609530797 4 29.348814359158876 24.521834197106305 26.408618816642566 19.720732627092257 5 24.361442281744523 30.866240892327067 24.971042270673465 19.801274555254945 6 25.79652784024467 33.82996242760568 25.286013797302815 15.087495934846839 7 78.52450508922578 6.0875582095335625 9.784598778032258 5.603337923208391 8 78.45918586226223 5.299299063803876 9.87814919631057 6.3633658776233215 9 72.05554902055756 7.516693075746778 12.773368576193079 7.654389327502578 10 40.62689851301887 22.40989198801558 19.939109195203468 17.024100303762083 11 30.13264508272154 24.427453449671674 24.482947114952154 20.95695435265463 12 26.923422893558723 21.51050712353222 31.084479072245557 20.481590910663503 13 24.12272264930356 24.4304979899115 32.47251264522111 18.97426671556383 14 19.790341888030113 28.00243563219186 31.029400571543235 21.17782190823479 15 17.667190235329123 25.935192809349505 35.67038700258094 20.727229952740434 16 21.524069166418723 24.251977221303477 31.499920426789185 22.724033185488615 17 21.765694950906788 24.025158973436387 28.14497547069284 26.064170604963984 18 22.28603455553172 24.63752672621972 31.172078798236935 21.904359920011622 19 23.561420139633686 25.908483888154667 28.070522623009804 22.459573349201847 20 24.289342033337714 26.603331003798758 28.21610700175061 20.891219961112917 21 24.089094318472746 25.6476221448786 29.699628427702546 20.563655108946104 22 22.910026916503483 23.878329100961107 28.598750354619746 24.612893627915668 23 21.055901910449002 24.884549650223843 29.93793289556535 24.121615543761806 24 22.85314936929581 24.9035088326264 28.65078431508224 23.592557482995552 25 21.3312944139606 26.010060821610697 27.542156503207142 25.116488261221555 26 19.861058254509725 27.331391285695506 27.786273275164163 25.02127718463061 27 21.295036707468117 25.98265995945226 29.88077857197224 22.841524761107383 28 19.918489354488276 25.663260010655893 30.230623923166878 24.18762671168896 29 20.109465060441043 25.79680461663011 30.479722670061793 23.61400765286706 30 23.52876052615191 24.68291805343168 30.069678455034214 21.71864296538219 31 24.66229821271649 25.901287702133253 26.137239570719828 23.29917451443043 32 23.725271759813452 25.784903232056237 28.359892333986064 22.129932674144243 33 24.581479508168364 23.795296185329466 28.80411843261533 22.81910587388684 34 21.885815902187225 24.369330408729528 29.603863798340726 24.140989890742524 35 20.70508784190533 24.58618470672082 30.599566844956787 24.10916060641706 36 24.258896630939446 24.38732087378305 31.060953079483262 20.292829415794245 37 21.956393880474117 24.732184250039786 31.349215684917763 21.962206184568334 38 22.65802201756146 25.084105424125212 29.39531279191259 22.862559766400732 39 22.73205970066634 23.42469260522692 29.962012441098523 23.881235253008214 40 23.65483216971928 22.54163754748445 30.269372617128305 23.534157665667966 41 19.668006725666164 24.015748576331468 30.05113443720982 26.26511026079255 42 21.567246282547174 23.25710450384373 31.496875886549358 23.678773327059734 43 23.475065907376784 22.361317732371074 31.197403837504584 22.966212522747558 44 22.83073048207527 22.9700873921437 29.16697227392559 25.03220985185544 45 22.476041544135455 22.517004449180398 28.425349949142337 26.581604057541806 46 24.078161651247914 22.79156662353568 30.222043855218274 22.908227869998132 47 20.370465191909826 23.43202717944105 32.769493706796936 23.428013921852187 48 20.37378650853509 22.54177593567717 31.89349644688315 25.190941108904592 49 22.340005950692287 21.009265089502563 33.53173587229538 23.11899308750977 50 21.449616318735686 20.866725251001583 32.6222486697435 25.061409760519233 51 20.786183322838895 21.520194297022577 28.9166280332962 28.776994346842326 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 452.0 1 713.0 2 974.0 3 1623.0 4 2272.0 5 1691.5 6 1111.0 7 1123.5 8 1136.0 9 1227.0 10 1318.0 11 1212.5 12 1107.0 13 1145.5 14 1184.0 15 1304.0 16 1424.0 17 1463.0 18 1502.0 19 1633.5 20 1765.0 21 1881.5 22 1998.0 23 2213.0 24 2428.0 25 2799.5 26 3894.5 27 4618.0 28 5612.5 29 6607.0 30 7666.0 31 8725.0 32 10492.5 33 12260.0 34 14264.5 35 16269.0 36 17216.5 37 18164.0 38 21245.5 39 24327.0 40 28555.5 41 32784.0 42 40004.0 43 47224.0 44 58411.0 45 69598.0 46 76307.0 47 83016.0 48 83221.0 49 83426.0 50 71601.0 51 59776.0 52 52524.5 53 45273.0 54 40385.5 55 35498.0 56 33419.0 57 31340.0 58 30527.0 59 29714.0 60 26889.5 61 24065.0 62 22329.0 63 20593.0 64 18095.5 65 15598.0 66 13465.0 67 11332.0 68 9385.5 69 7439.0 70 6168.0 71 4897.0 72 4311.0 73 3725.0 74 2959.5 75 1698.5 76 1203.0 77 840.5 78 478.0 79 449.0 80 420.0 81 253.0 82 86.0 83 67.5 84 49.0 85 33.5 86 18.0 87 17.0 88 16.0 89 13.5 90 11.0 91 10.0 92 9.0 93 10.0 94 11.0 95 5.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 722605.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.12683931817282 #Duplication Level Percentage of deduplicated Percentage of total 1 69.96925914858514 19.680141092838475 2 12.512693896362052 7.038850613209144 3 4.950080886327471 4.176903891050738 4 2.4744041724197774 2.783886742634699 5 1.4643585870551166 2.059388934114292 6 0.9975059970703798 1.6834014539107403 7 0.6721618644900799 1.3234052130821148 8 0.5354033963823239 1.2047364240359693 9 0.40822109806629103 1.0333772308438773 >10 4.988788242186967 35.710704180190454 >50 0.9446169425383559 16.454770398042776 >100 0.07460102422709666 3.9422858461792782 >500 0.003952372144481943 0.7257863579342393 >1k 0.003952372144481943 2.1823616219332242 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 3801 0.5260135205264287 TruSeq Adapter, Index 19 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 3738 0.5172950643851068 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGCT 2160 0.2989184962738979 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 1446 0.20010932667224834 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGC 1199 0.1659274430705572 No Hit GAATCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTC 1180 0.16329806740888866 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCG 1139 0.1576241515073934 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1042 0.14420049681361186 No Hit ACTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 991 0.1371426989849226 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.383881927193972E-4 0.0 0.0 0.312895703738557 0.0 2 1.383881927193972E-4 0.0 0.0 1.7618200815106455 0.0 3 1.383881927193972E-4 0.0 0.0 2.4161194566879556 0.0 4 1.383881927193972E-4 0.0 0.0 3.2094989655482595 0.0 5 1.383881927193972E-4 0.0 0.0 5.215989371786799 0.0 6 1.383881927193972E-4 0.0 0.0 6.23729423405595 0.0 7 1.383881927193972E-4 0.0 0.0 7.223863659952533 0.0 8 1.383881927193972E-4 0.0 0.0 8.726205880114309 0.0 9 1.383881927193972E-4 0.0 0.0 9.253326506182493 0.0 10 2.767763854387944E-4 0.0 0.0 10.59707585748784 0.0 11 2.767763854387944E-4 0.0 0.0 12.475972350039095 0.0 12 2.767763854387944E-4 0.0 0.0 14.030902083434242 0.0 13 2.767763854387944E-4 0.0 0.0 14.60756568249597 0.0 14 2.767763854387944E-4 0.0 0.0 14.86925775492835 0.0 15 2.767763854387944E-4 0.0 0.0 15.310992866088664 0.0 16 2.767763854387944E-4 0.0 0.0 16.292857093432787 0.0 17 2.767763854387944E-4 0.0 0.0 17.407712373980253 0.0 18 2.767763854387944E-4 0.0 0.0 18.690570920489066 0.0 19 2.767763854387944E-4 0.0 0.0 19.447969499242326 0.0 20 2.767763854387944E-4 0.0 0.0 20.127178749109127 0.0 21 2.767763854387944E-4 0.0 0.0 20.98490876758395 0.0 22 2.767763854387944E-4 0.0 0.0 21.838071975699034 0.0 23 2.767763854387944E-4 0.0 0.0 22.671030507677084 0.0 24 2.767763854387944E-4 0.0 0.0 23.35190041585652 0.0 25 2.767763854387944E-4 0.0 0.0 23.948768691055278 0.0 26 2.767763854387944E-4 0.0 0.0 24.490558465551718 0.0 27 2.767763854387944E-4 0.0 0.0 25.05504390365414 0.0 28 2.767763854387944E-4 0.0 0.0 25.6240961521163 0.0 29 2.767763854387944E-4 0.0 0.0 26.221517980085938 0.0 30 2.767763854387944E-4 0.0 0.0 26.903771770192566 0.0 31 2.767763854387944E-4 0.0 0.0 27.4654894444406 0.0 32 4.1516457815819155E-4 0.0 0.0 28.045889524705753 0.0 33 4.1516457815819155E-4 0.0 0.0 28.592107721369214 0.0 34 4.1516457815819155E-4 0.0 0.0 29.157423488627952 0.0 35 4.1516457815819155E-4 0.0 0.0 29.751939164550482 0.0 36 4.1516457815819155E-4 0.0 0.0 30.304523218079034 0.0 37 4.1516457815819155E-4 0.0 0.0 30.859598259076535 0.0 38 4.1516457815819155E-4 0.0 0.0 31.398481881525868 0.0 39 4.1516457815819155E-4 0.0 0.0 32.10952041571813 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGG 20 7.031546E-4 45.0 2 CTTCGAA 20 7.031546E-4 45.0 34 GTACCTA 20 7.031546E-4 45.0 33 TCGTTAG 20 7.031546E-4 45.0 1 GTACCCG 25 3.8893628E-5 45.0 10 ACACGTA 20 7.031546E-4 45.0 42 TTCGTAC 25 3.8893628E-5 45.0 33 TAACGCG 20 7.031546E-4 45.0 1 AGGCGAC 25 3.8893628E-5 45.0 30 TTATCGC 20 7.031546E-4 45.0 35 ACCCTCG 25 3.8893628E-5 45.0 38 TAGTTCG 20 7.031546E-4 45.0 20 CCGTAAC 20 7.031546E-4 45.0 33 AATTCGT 25 3.8893628E-5 45.0 31 ACCGTAA 20 7.031546E-4 45.0 32 TCGACGT 25 3.8893628E-5 45.0 26 TAATGCG 25 3.8893628E-5 45.0 24 TCGGTAA 25 3.8893628E-5 45.0 34 GCGTAAG 20 7.031546E-4 45.0 1 TACGTTC 20 7.031546E-4 45.0 28 >>END_MODULE