##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935792.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1169438 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14161332195465 33.0 31.0 34.0 30.0 34.0 2 32.15977332701691 33.0 31.0 34.0 30.0 34.0 3 32.18764055896935 34.0 31.0 34.0 30.0 34.0 4 35.83782209916216 37.0 35.0 37.0 35.0 37.0 5 34.89295627472342 37.0 35.0 37.0 33.0 37.0 6 35.376816898373406 37.0 35.0 37.0 33.0 37.0 7 35.953838510464 37.0 35.0 37.0 35.0 37.0 8 35.96265043550834 37.0 35.0 37.0 35.0 37.0 9 37.825760750035485 39.0 38.0 39.0 35.0 39.0 10 37.43474557864547 39.0 37.0 39.0 35.0 39.0 11 37.338745619690826 39.0 37.0 39.0 34.0 39.0 12 37.18889244235265 39.0 37.0 39.0 34.0 39.0 13 37.09432907088704 39.0 37.0 39.0 33.0 39.0 14 38.06643276514018 40.0 37.0 41.0 33.0 41.0 15 38.23138122756401 40.0 37.0 41.0 33.0 41.0 16 38.30022797275272 40.0 37.0 41.0 34.0 41.0 17 38.30889880438296 40.0 37.0 41.0 34.0 41.0 18 38.28943218879496 40.0 37.0 41.0 34.0 41.0 19 38.1943805486054 40.0 37.0 41.0 34.0 41.0 20 38.18356937263882 40.0 37.0 41.0 34.0 41.0 21 38.08450896926558 40.0 36.0 41.0 34.0 41.0 22 38.16090378455292 40.0 37.0 41.0 34.0 41.0 23 38.15613226182149 40.0 36.0 41.0 34.0 41.0 24 38.11061980199036 40.0 36.0 41.0 34.0 41.0 25 37.94970233565183 40.0 36.0 41.0 34.0 41.0 26 37.96483610075951 40.0 36.0 41.0 34.0 41.0 27 37.9730237943354 40.0 36.0 41.0 34.0 41.0 28 37.880218532320654 40.0 36.0 41.0 34.0 41.0 29 37.819138765800325 40.0 36.0 41.0 34.0 41.0 30 37.68380281810579 40.0 36.0 41.0 33.0 41.0 31 37.62153615668381 40.0 35.0 41.0 33.0 41.0 32 37.555621589173604 40.0 35.0 41.0 33.0 41.0 33 37.45012732611733 40.0 35.0 41.0 33.0 41.0 34 37.347139395162465 40.0 35.0 41.0 33.0 41.0 35 37.253482441993505 40.0 35.0 41.0 32.0 41.0 36 37.17648990369733 40.0 35.0 41.0 32.0 41.0 37 37.12829239344027 40.0 35.0 41.0 32.0 41.0 38 37.04165590651236 39.0 35.0 41.0 32.0 41.0 39 36.976606711941976 39.0 35.0 41.0 32.0 41.0 40 36.82685956844228 39.0 35.0 41.0 31.0 41.0 41 36.69413513157602 39.0 35.0 41.0 31.0 41.0 42 36.71740528356356 39.0 35.0 41.0 31.0 41.0 43 36.64782656284472 39.0 35.0 41.0 31.0 41.0 44 36.50395061559484 39.0 35.0 41.0 31.0 41.0 45 36.47592604310788 39.0 35.0 41.0 31.0 41.0 46 36.37560007456573 39.0 35.0 41.0 31.0 41.0 47 36.285127556997466 38.0 35.0 41.0 31.0 41.0 48 36.211162968879066 38.0 35.0 41.0 31.0 41.0 49 36.20005506918708 38.0 35.0 40.0 31.0 41.0 50 36.087177772571096 38.0 35.0 40.0 30.0 41.0 51 34.89812114879113 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 15.0 9 27.0 10 46.0 11 33.0 12 25.0 13 31.0 14 41.0 15 58.0 16 92.0 17 189.0 18 335.0 19 541.0 20 851.0 21 1454.0 22 2186.0 23 3130.0 24 4624.0 25 6648.0 26 8623.0 27 10224.0 28 11583.0 29 13642.0 30 16696.0 31 21416.0 32 29042.0 33 42286.0 34 78619.0 35 88872.0 36 85021.0 37 127561.0 38 222611.0 39 392608.0 40 307.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.714909212801366 21.790723407311887 24.38880898346043 12.105558396426318 2 33.19585989167446 23.943637884180262 25.2812889610223 17.57921326312297 3 32.93949743381009 23.75517128740472 26.420297613041477 16.885033665743716 4 29.117063067900993 25.092736853086695 26.326662892774138 19.463537186238174 5 24.64380326276382 30.85430779571042 25.153877332530666 19.34801160899509 6 26.480668492044895 34.12297188906124 24.52152230387588 14.874837315017983 7 80.35714591111287 5.877695097987239 8.963707353446699 4.801451637453204 8 81.79159562114452 4.975381337018294 8.456369640801821 4.776653401035369 9 76.21601145165455 6.521166577450023 10.514281218841871 6.74854075205355 10 42.467749465982806 23.8305066194189 18.288870380473355 15.412873534124937 11 31.475717395877332 25.587931981002843 23.70266743512696 19.233683187992863 12 28.667530899457688 22.373310940810885 28.850695804309424 20.108462355422006 13 26.25782640892463 23.27964372630272 30.77974206413679 19.68278780063586 14 21.780889623904816 25.428111622847897 30.989244406287465 21.80175434695982 15 20.200728897128364 25.117535089504532 33.78716956349973 20.894566449867373 16 25.33242463473908 24.223686933381675 29.37359654808549 21.070291883793754 17 25.39005915662053 23.87445935569051 27.606593936574665 23.128887551114296 18 26.322045290130813 24.39727458830652 29.061138769220772 20.219541352341892 19 25.355341625635564 26.530692520680876 26.556003824059076 21.557962029624488 20 25.435722116093373 27.14560327268312 27.071636119229918 20.34703849199359 21 24.79353330403151 26.528469230519274 29.161015804172603 19.516981661276613 22 24.13176243631556 23.304099918080308 29.25422296863964 23.309914676964492 23 22.515858044633404 25.552359338417258 30.044773643408202 21.887008973541136 24 23.340014605306138 25.35465753635507 28.817260940725376 22.488066917613416 25 24.732734869227784 25.925615552085702 26.492469032133382 22.84918054655313 26 22.396655487507676 25.597081675129424 27.24607888575538 24.760183951607527 27 22.16868273478372 24.807642645441657 29.45739748494576 23.566277134828866 28 20.738423071595076 25.267179619612158 29.3662425883202 24.62815472047257 29 22.03425919116704 27.10481444933378 27.670556284300662 23.190370075198512 30 24.049928256136706 24.874426861449688 29.371031213283644 21.70461366912996 31 25.117706111824656 25.200822959404434 27.3179937713671 22.363477157403814 32 25.092736853086695 25.85823275795724 26.721211385297895 22.327819003658167 33 25.05254660785779 24.282347589183864 27.851668921310917 22.813436881647423 34 23.41158744627761 24.503907004903212 29.569160571146142 22.515344977673035 35 22.575715856676453 25.89226619966172 29.19718702487862 22.33483091878321 36 25.736464866029667 26.164106177497224 27.370070067844555 20.729358888628553 37 23.759275823087673 26.32546573653328 27.746917750235582 22.16834069014347 38 24.102175574934286 25.674811319625324 27.756751533642653 22.466261571797734 39 24.195040694761072 24.143905021044297 27.602745934371896 24.058308349822735 40 25.27154068877529 23.142398314404016 29.842368727542635 21.743692269278064 41 23.07664023231672 24.06942480063073 28.442037970375512 24.411896996677036 42 23.05902493334405 24.63619276951835 29.404637099187813 22.900145197949783 43 23.247320507799472 23.55498966170075 29.364703387439096 23.832986443060683 44 23.45254729194707 23.673935685346294 28.699939629120998 24.17357739358564 45 22.903993200152552 23.47178730296091 27.63635182027606 25.987867676610477 46 23.25963411484833 24.005034897104423 28.936463497851108 23.798867490196145 47 22.3708311171691 24.596515591249815 30.166541535335778 22.866111756245306 48 21.751559296003723 25.742792691874218 29.111590353657057 23.394057658465005 49 23.795960110754056 23.685821736594843 29.781228248098657 22.736989904552445 50 22.03203590100544 23.73866763351285 29.481597143243164 24.747699322238546 51 21.39737207102899 23.94321032837996 28.61613869226073 26.043278908330326 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 424.0 1 994.0 2 1564.0 3 4239.5 4 6915.0 5 4609.0 6 2303.0 7 2275.5 8 2248.0 9 2280.0 10 2312.0 11 2390.0 12 2468.0 13 2458.5 14 2449.0 15 2382.0 16 2315.0 17 2280.5 18 2246.0 19 2538.5 20 2831.0 21 3059.0 22 3287.0 23 4021.5 24 4756.0 25 5296.0 26 6913.5 27 7991.0 28 9395.0 29 10799.0 30 13693.5 31 16588.0 32 20456.5 33 24325.0 34 27119.0 35 29913.0 36 32350.0 37 34787.0 38 37179.0 39 39571.0 40 43113.0 41 46655.0 42 53388.0 43 60121.0 44 64843.5 45 69566.0 46 81443.5 47 93321.0 48 102312.5 49 111304.0 50 111099.5 51 110895.0 52 99547.5 53 88200.0 54 80961.5 55 73723.0 56 70098.5 57 66474.0 58 62316.0 59 58158.0 60 54086.0 61 50014.0 62 44696.5 63 39379.0 64 35201.5 65 31024.0 66 26370.0 67 21716.0 68 18692.5 69 15669.0 70 13527.5 71 11386.0 72 9091.5 73 6797.0 74 5515.5 75 3395.5 76 2557.0 77 1927.0 78 1297.0 79 890.0 80 483.0 81 375.0 82 267.0 83 214.0 84 161.0 85 108.5 86 56.0 87 38.5 88 21.0 89 16.0 90 11.0 91 12.0 92 13.0 93 8.0 94 3.0 95 3.5 96 4.0 97 2.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1169438.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.64504417326304 #Duplication Level Percentage of deduplicated Percentage of total 1 72.90050139228593 20.882380826350545 2 10.565187370920174 6.052805178776184 3 3.770957626864542 3.240577433911139 4 1.8321024687747698 2.0992262459199025 5 1.1438004543674547 1.6382107270377038 6 0.8149169030863481 1.4005998411868295 7 0.6158856606804192 1.234945036910893 8 0.5056336153328316 1.1587117797356523 9 0.43427663378518 1.1195886022373214 >10 6.890978970239674 48.61362188642661 >50 0.4716590898633156 8.103755172245974 >100 0.04842082782073622 2.504678275118487 >500 0.003287833987608655 0.6496717970488808 >1k 0.0023911519909881125 1.3012271970939497 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4070 0.3480304214503035 No Hit GCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGC 2228 0.19051886461702117 TruSeq Adapter, Index 14 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGC 2063 0.17640952320687373 TruSeq Adapter, Index 14 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTC 1534 0.1311741195343404 No Hit CTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGCT 1524 0.13031900793372542 TruSeq Adapter, Index 15 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGC 1446 0.12364913744892846 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCG 1270 0.10859917327810452 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5653348018449886E-4 0.0 0.0 0.1377584788590759 0.0 2 2.5653348018449886E-4 0.0 0.0 0.6519370843088732 0.0 3 2.5653348018449886E-4 0.0 0.0 0.9635397515729778 0.0 4 2.5653348018449886E-4 0.0 0.0 1.3716845185465154 0.0 5 2.5653348018449886E-4 0.0 0.0 2.4264646779051136 0.0 6 2.5653348018449886E-4 0.0 0.0 3.2060699241858055 0.0 7 2.5653348018449886E-4 0.0 0.0 3.8606578544565853 0.0 8 2.5653348018449886E-4 0.0 0.0 4.8902977327571024 0.0 9 2.5653348018449886E-4 0.0 0.0 5.3613787135359035 0.0 10 2.5653348018449886E-4 0.0 0.0 6.341507630160812 0.0 11 2.5653348018449886E-4 0.0 0.0 7.485988996423924 0.0 12 2.5653348018449886E-4 0.0 0.0 8.445253189993826 0.0 13 2.5653348018449886E-4 0.0 0.0 8.837065325395617 0.0 14 2.5653348018449886E-4 0.0 0.0 9.038102062700203 0.0 15 2.5653348018449886E-4 0.0 0.0 9.327984895308687 0.0 16 2.5653348018449886E-4 0.0 0.0 9.846268036441437 0.0 17 2.5653348018449886E-4 0.0 0.0 10.434755839984676 0.0 18 2.5653348018449886E-4 0.0 0.0 11.119614720917227 0.0 19 2.5653348018449886E-4 0.0 0.0 11.539731050299375 0.0 20 3.4204464024599853E-4 0.0 0.0 11.985158683059726 0.0 21 4.2755580030749815E-4 0.0 0.0 12.513190096439486 0.0 22 4.2755580030749815E-4 0.0 0.0 13.084319134490242 0.0 23 4.2755580030749815E-4 0.0 0.0 13.631505047723778 0.0 24 4.2755580030749815E-4 0.0 0.0 14.087279530851571 0.0 25 4.2755580030749815E-4 0.0 0.0 14.493543052303757 0.0 26 5.985781204304974E-4 0.0 0.0 14.892538125150713 0.0 27 5.985781204304974E-4 0.0 0.0 15.352759188601704 0.0 28 5.985781204304974E-4 0.0 0.0 15.76936956042133 0.0 29 5.985781204304974E-4 0.0 0.0 16.207870789216702 0.0 30 5.985781204304974E-4 0.0 0.0 16.74778825384501 0.0 31 6.840892804919971E-4 0.0 0.0 17.18526334871964 0.0 32 7.696004405534966E-4 0.0 0.0 17.612049548586587 0.0 33 7.696004405534966E-4 0.0 0.0 18.06166722818995 0.0 34 7.696004405534966E-4 0.0 0.0 18.50136561322618 0.0 35 7.696004405534966E-4 0.0 0.0 18.993567850540174 0.0 36 7.696004405534966E-4 0.0 0.0 19.425313697690687 0.0 37 8.551116006149963E-4 0.0 0.0 19.865696172007407 0.0 38 8.551116006149963E-4 0.0 0.0 20.395181275108214 0.0 39 8.551116006149963E-4 0.0 0.0 21.230625308909065 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATCGT 20 7.0333364E-4 45.000004 18 CCCGATA 20 7.0333364E-4 45.000004 30 GTTAACG 60 3.6379788E-12 41.249996 1 TAGTACG 55 6.184564E-11 40.909092 1 ATATGCG 50 1.0822987E-9 40.500004 1 TTAAGCG 45 1.9283107E-8 40.0 1 TACGGGA 360 0.0 39.375 4 CGTTTTT 2060 0.0 39.32039 1 CGCATCG 35 6.248383E-6 38.571426 21 ACGGTTG 35 6.248383E-6 38.571426 1 CGTATGG 120 0.0 37.499996 2 GCTATCG 30 1.139934E-4 37.499996 16 TCAATCG 30 1.139934E-4 37.499996 30 GCGATGT 200 0.0 37.125004 9 ACGGTCT 140 0.0 36.964283 30 TAACGCC 55 2.750312E-9 36.81818 12 ACGGGAA 400 0.0 36.562504 5 GATCGCG 25 0.0021071231 36.000004 1 CGTTCGA 25 0.0021071231 36.000004 14 TAGTTCG 25 0.0021071231 36.000004 32 >>END_MODULE