SRR2935791.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935791.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	507318
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	2927	0.5769556767155906	No Hit
CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	2021	0.3983694645173244	No Hit
CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGCT	1438	0.28345140523300966	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1043	0.20559097055495765	No Hit
TCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	868	0.17109584126721306	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGC	680	0.13403821666095034	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCG	646	0.1273363058279028	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC	640	0.12615361568089442	No Hit
ACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	631	0.12437958046038185	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCC	630	0.12418246543588045	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGATGT	70	0.0	45.000004	9
CATATCG	20	7.029557E-4	45.0	44
GGTCGGT	20	7.029557E-4	45.0	17
CGAAAGT	20	7.029557E-4	45.0	13
TAGACGA	25	3.8877137E-5	45.0	11
CCGGCAC	20	7.029557E-4	45.0	26
TAGCGGA	20	7.029557E-4	45.0	2
CCAATCG	20	7.029557E-4	45.0	24
TTGTACG	25	3.8877137E-5	45.0	1
TACGCTA	20	7.029557E-4	45.0	20
GTAGACG	25	3.8877137E-5	45.0	1
TACGACG	25	3.8877137E-5	45.0	27
CATACGG	25	3.8877137E-5	45.0	2
CTACCGA	20	7.029557E-4	45.0	27
GTATACG	20	7.029557E-4	45.0	1
TTACGCG	25	3.8877137E-5	45.0	1
TTGCACG	25	3.8877137E-5	45.0	1
CGCGTAA	20	7.029557E-4	45.0	18
ATACGAA	40	6.8012014E-9	45.0	19
TTCGCAA	25	3.8877137E-5	45.0	15