##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935788.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1375415 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.026701032052145 33.0 31.0 34.0 30.0 34.0 2 32.047930261048485 33.0 31.0 34.0 30.0 34.0 3 32.10153735418037 33.0 31.0 34.0 30.0 34.0 4 35.7696433440089 37.0 35.0 37.0 35.0 37.0 5 34.780173256798854 37.0 35.0 37.0 33.0 37.0 6 35.268537132429124 37.0 35.0 37.0 33.0 37.0 7 35.83235968780332 37.0 35.0 37.0 35.0 37.0 8 35.807586801074585 37.0 35.0 37.0 35.0 37.0 9 37.69371498784003 39.0 37.0 39.0 35.0 39.0 10 37.36018947008721 39.0 37.0 39.0 34.0 39.0 11 37.25557522638622 39.0 37.0 39.0 34.0 39.0 12 37.10731888193745 39.0 37.0 39.0 34.0 39.0 13 36.95955111729914 39.0 37.0 39.0 33.0 39.0 14 37.86793876757197 40.0 37.0 41.0 33.0 41.0 15 37.951933052933114 40.0 37.0 41.0 33.0 41.0 16 38.10943751522268 40.0 37.0 41.0 33.0 41.0 17 38.07936877233417 40.0 37.0 41.0 33.0 41.0 18 38.06274688003257 40.0 37.0 41.0 33.0 41.0 19 38.00019557733484 40.0 37.0 41.0 33.0 41.0 20 37.916975603726875 40.0 36.0 41.0 33.0 41.0 21 37.88950098697484 40.0 36.0 41.0 33.0 41.0 22 37.96454379223725 40.0 36.0 41.0 34.0 41.0 23 37.979659230123275 40.0 36.0 41.0 34.0 41.0 24 37.922265643460335 40.0 36.0 41.0 34.0 41.0 25 37.81611659026548 40.0 36.0 41.0 33.0 41.0 26 37.79844846828048 40.0 36.0 41.0 33.0 41.0 27 37.81056917366758 40.0 36.0 41.0 34.0 41.0 28 37.69046360552997 40.0 36.0 41.0 33.0 41.0 29 37.61464067208806 40.0 36.0 41.0 33.0 41.0 30 37.503259016369604 40.0 35.0 41.0 33.0 41.0 31 37.44147257373229 40.0 35.0 41.0 33.0 41.0 32 37.35055019757673 40.0 35.0 41.0 33.0 41.0 33 37.19020877335204 40.0 35.0 41.0 32.0 41.0 34 37.05896620292784 40.0 35.0 41.0 32.0 41.0 35 37.0373610873809 40.0 35.0 41.0 32.0 41.0 36 36.99045306325727 39.0 35.0 41.0 31.0 41.0 37 36.98758847329715 39.0 35.0 41.0 32.0 41.0 38 36.81079456018729 39.0 35.0 41.0 31.0 41.0 39 36.76636287956726 39.0 35.0 41.0 31.0 41.0 40 36.56254366863819 39.0 35.0 41.0 31.0 41.0 41 36.430732542541705 39.0 35.0 41.0 30.0 41.0 42 36.58201488278083 39.0 35.0 41.0 31.0 41.0 43 36.50311069749857 39.0 35.0 41.0 31.0 41.0 44 36.40748428656078 39.0 35.0 41.0 31.0 41.0 45 36.38697556737421 39.0 35.0 41.0 31.0 41.0 46 36.27940003562561 38.0 35.0 40.0 31.0 41.0 47 36.131345084938 38.0 35.0 40.0 30.0 41.0 48 36.11027289945216 38.0 35.0 40.0 30.0 41.0 49 36.11894591814107 38.0 35.0 40.0 30.0 41.0 50 35.980276498365946 38.0 35.0 40.0 30.0 41.0 51 34.84121083454812 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 17.0 9 22.0 10 34.0 11 34.0 12 38.0 13 26.0 14 43.0 15 70.0 16 115.0 17 194.0 18 399.0 19 731.0 20 1388.0 21 2340.0 22 3415.0 23 4888.0 24 6422.0 25 8540.0 26 10401.0 27 12492.0 28 14308.0 29 16783.0 30 20942.0 31 27429.0 32 37750.0 33 54949.0 34 95273.0 35 106554.0 36 101493.0 37 153270.0 38 261631.0 39 433097.0 40 325.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.86112918646372 19.642726013603166 22.69649523961859 10.799649560314522 2 31.031361443637014 27.810878898368856 23.58517247521657 17.57258718277756 3 31.402594853189765 28.306656536390832 24.92513168752704 15.365616922892364 4 27.834071898299783 23.602621754161472 29.284834031910368 19.278472315628374 5 27.379372771127258 29.56060534456873 24.09992620409113 18.96009568021288 6 24.835340606289737 36.362334277290856 24.454364682659417 14.347960433759994 7 77.13206559474777 5.680685465841219 12.557519003355349 4.629729936055663 8 77.51718572212751 8.317707746389273 9.03916272543196 5.125943806051265 9 72.3472551920693 6.229174467342584 10.55034298738926 10.873227353198853 10 43.09586561146999 23.14952214422556 18.021397178306184 15.733215065998262 11 32.544650160133486 23.04257260535911 23.871922292544433 20.540854941962973 12 28.16589901956864 20.093571758342026 29.29850263375054 22.44202658833879 13 26.908024123628145 21.533791619256736 33.04820726835173 18.50997698876339 14 21.910477928479768 26.45848707481015 30.13388686323764 21.497148133472443 15 19.082822275458682 23.834188226826086 36.106775046077 20.976214451638235 16 24.18760883078925 24.574183064747732 28.160373414569424 23.077834689893596 17 24.79295339951942 24.44753038173933 27.344910445211077 23.41460577353017 18 25.34602283674382 23.420131378529387 29.380586950120506 21.853258834606283 19 25.0517116652065 26.02036476263528 26.042176361316404 22.88574721084182 20 25.52778615908653 26.915876299153346 28.349552680463713 19.20678486129641 21 24.717485268082722 27.606504218726712 29.143058640483055 18.53295187270751 22 23.34626276432931 22.264552880403368 30.164932038693777 24.224252316573544 23 21.824031292373576 26.650647259190862 29.97109963174751 21.554221816688056 24 23.62036185442212 24.834395437013555 27.450551288156667 24.09469142040766 25 23.62014373843531 28.36620220079031 25.516298717114474 22.497355343659915 26 21.43614836249423 24.861223703391342 26.984728245656765 26.717899688457663 27 22.61041213015708 25.39924313752577 27.500209027820695 24.49013570449646 28 19.052431447962977 26.658935666689693 28.531243297477488 25.757389587869845 29 22.18130527877041 27.665904472468313 26.040067906777224 24.112722341984057 30 22.53109061628672 26.736803073981307 27.024716176572163 23.70739013315981 31 23.93001385036516 27.449824234867293 24.65452245322321 23.965639461544335 32 24.999436533700738 27.45091481480135 23.611928036265418 23.937720615232493 33 23.243166607896526 26.42576967678846 24.428190764242068 25.902872951072947 34 21.131513034247845 28.27030387192229 27.449751529538357 23.148431564291506 35 19.87683717278058 27.841996779153927 25.422872369430316 26.858293678635174 36 22.58671019292359 30.206592192174725 25.065816499020293 22.14088111588139 37 20.40547761948212 27.96763158755721 25.744884271292662 25.882006521668004 38 21.19403961713374 29.853971346829866 24.454873619961976 24.497115416074422 39 21.576760468658552 26.803837387261296 25.66592628406699 25.95347586001316 40 22.74055466895446 25.64069753492582 27.57771290846763 24.041034887652092 41 19.46539771632562 26.798966130222514 26.970478001185093 26.76515815226677 42 20.46356917730285 24.58145359764144 29.14771178153503 25.807265443520684 43 21.16132221911205 24.533395375214027 28.12743790056092 26.177844505113 44 22.084898012599833 24.356067077936476 27.639367027406276 25.919667882057418 45 21.261873689032036 23.77493338374236 25.458861507254177 29.504331419971425 46 23.272830382102857 25.433123820810444 26.044575637171324 25.249470159915372 47 18.863252182068685 25.89531159686349 31.47682699403453 23.764609227033297 48 20.28202397094695 27.512278112424248 26.93390722072974 25.271790695899053 49 21.96747890636644 23.93677544595631 29.776612876840808 24.31913277083644 50 20.671288302076103 24.658230424999 28.3803070346041 26.290174238320795 51 20.282387497591635 24.062555665017467 26.04821090361818 29.606845933772718 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 486.0 1 961.0 2 1436.0 3 3814.0 4 6192.0 5 4215.0 6 2238.0 7 2201.0 8 2164.0 9 2181.5 10 2199.0 11 2206.0 12 2213.0 13 2263.0 14 2313.0 15 2417.0 16 2521.0 17 2386.5 18 2252.0 19 2338.0 20 2424.0 21 2690.0 22 2956.0 23 3509.5 24 4063.0 25 4833.5 26 7031.0 27 8458.0 28 9479.5 29 10501.0 30 12570.5 31 14640.0 32 17159.0 33 19678.0 34 24186.0 35 28694.0 36 32099.5 37 35505.0 38 38493.0 39 41481.0 40 47852.5 41 54224.0 42 63083.0 43 71942.0 44 112583.0 45 153224.0 46 140610.5 47 127997.0 48 132581.0 49 137165.0 50 124019.0 51 110873.0 52 102546.0 53 94219.0 54 86977.0 55 79735.0 56 80313.5 57 80892.0 58 75969.0 59 71046.0 60 65155.5 61 59265.0 62 52676.5 63 46088.0 64 39922.5 65 33757.0 66 27748.5 67 21740.0 68 17881.5 69 14023.0 70 11381.0 71 8739.0 72 6905.0 73 5071.0 74 4383.0 75 2842.0 76 1989.0 77 1463.0 78 937.0 79 607.5 80 278.0 81 252.0 82 226.0 83 174.0 84 122.0 85 86.0 86 50.0 87 43.0 88 36.0 89 28.0 90 20.0 91 27.0 92 34.0 93 19.5 94 5.0 95 3.5 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1375415.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.41560065216576 #Duplication Level Percentage of deduplicated Percentage of total 1 72.41400566178103 19.852734608470595 2 11.074188546228276 6.072110614603651 3 4.183743287786071 3.4409950562736586 4 2.062300526145499 2.2615683059822542 5 1.2666404487868357 1.7362854356909954 6 0.8690403926064707 1.429515861258021 7 0.6565956487550458 1.2600674867352624 8 0.5044757843486055 1.106440531391157 9 0.4130843203112064 1.0192459285191022 >10 5.726351604111126 39.48906070242664 >50 0.7560263702445966 12.528879215679103 >100 0.06422074473600703 3.359262308649363 >500 0.004796570139067306 0.8466463151413334 >1k 0.0034641895448819433 1.9518379154052121 >5k 2.664761188370726E-4 0.4466645586999838 >10k+ 7.994283565112177E-4 3.1986851550736164 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGC 15683 1.1402376737202953 No Hit GAATCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 14282 1.03837750787944 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCG 13819 1.0047149405815698 No Hit GCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 6114 0.4445203811213343 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3423 0.24887034095164004 No Hit GAACTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT 2909 0.21149980187797868 No Hit GAATGACTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCT 2701 0.19637709345906507 No Hit CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 2579 0.1875070433287408 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2436 0.1771101812907377 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACACAACTT 2183 0.15871573306965533 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACACAACTTCGTA 2098 0.15253578011000316 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTC 1990 0.14468360458479806 No Hit CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGCT 1920 0.13959423155920214 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9082131574833777E-4 0.0 0.0 0.1458468898477914 0.0 2 2.9082131574833777E-4 0.0 0.0 0.9534576836809254 0.0 3 2.9082131574833777E-4 0.0 0.0 1.294954613698411 0.0 4 2.9082131574833777E-4 0.0 0.0 1.8972455586132186 0.0 5 2.9082131574833777E-4 0.0 0.0 4.0043914018677995 0.0 6 2.9082131574833777E-4 0.0 0.0 4.798987941821196 0.0 7 2.9082131574833777E-4 0.0 0.0 5.673560343605384 0.0 8 2.9082131574833777E-4 0.0 0.0 6.81081709883926 0.0 9 2.9082131574833777E-4 0.0 0.0 7.223856072530836 0.0 10 2.9082131574833777E-4 0.0 0.0 9.127281584103708 0.0 11 2.9082131574833777E-4 0.0 0.0 10.338479658866596 0.0 12 3.635266446854222E-4 0.0 0.0 12.491793385996226 0.0 13 3.635266446854222E-4 0.0 0.0 12.9448202906032 0.0 14 4.3623197362250665E-4 0.0 0.0 13.167444007808552 0.0 15 4.3623197362250665E-4 0.0 0.0 13.623815357546631 0.0 16 4.3623197362250665E-4 0.0 0.0 14.238320797722869 0.0 17 5.089373025595911E-4 0.0 0.0 14.92756731604643 0.0 18 5.089373025595911E-4 0.0 0.0 15.690173511267508 0.0 19 5.089373025595911E-4 0.0 0.0 16.348520264792807 0.0 20 5.089373025595911E-4 0.0 0.0 16.88741216287448 0.0 21 5.089373025595911E-4 0.0 0.0 17.506498038773753 0.0 22 5.816426314966755E-4 0.0 0.0 18.171897209205948 0.0 23 5.816426314966755E-4 0.0 0.0 18.781458687014464 0.0 24 5.816426314966755E-4 0.0 0.0 19.273019415958093 0.0 25 5.816426314966755E-4 0.0 0.0 19.717612502408365 0.0 26 6.5434796043376E-4 0.0 0.0 20.149045924321022 0.0 27 6.5434796043376E-4 0.0 0.0 20.69629893523046 0.0 28 6.5434796043376E-4 0.0 0.0 21.142273422930533 0.0 29 6.5434796043376E-4 0.0 0.0 21.649683913582447 0.0 30 6.5434796043376E-4 0.0 0.0 22.30694008717369 0.0 31 6.5434796043376E-4 0.0 0.0 22.79123028322361 0.0 32 7.270532893708444E-4 0.0 0.0 23.256689799078824 0.0 33 7.270532893708444E-4 0.0 0.0 23.729710669143493 0.0 34 7.270532893708444E-4 0.0 0.0 24.23603057986135 0.0 35 7.270532893708444E-4 0.0 0.0 24.785028518665275 0.0 36 7.270532893708444E-4 0.0 0.0 25.254923059585654 0.0 37 7.997586183079289E-4 0.0 0.0 25.749900938989324 0.0 38 7.997586183079289E-4 0.0 0.0 26.308423275884007 0.0 39 8.724639472450133E-4 0.0 0.0 27.247558009764326 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTAGA 25 3.891206E-5 45.000004 42 ATCGTAC 20 7.0337724E-4 45.0 21 TATCGTG 20 7.0337724E-4 45.0 1 ATTAGCG 140 0.0 40.17857 1 TACGGCT 1935 0.0 40.000004 7 CACGGGA 355 0.0 39.929577 4 CGTTTTT 2010 0.0 39.850746 1 CCGGTAT 85 0.0 39.705883 42 CCGTAAG 40 3.458881E-7 39.375 1 ATGCGTA 40 3.458881E-7 39.375 16 AGTTGCG 75 0.0 39.0 1 AGCGACT 730 0.0 38.219177 19 AACGAGC 740 0.0 38.006756 15 CGATGAA 705 0.0 37.659573 19 CGACGGT 120 0.0 37.500004 28 CACGCGT 30 1.1400385E-4 37.500004 43 TATAGCG 30 1.1400385E-4 37.500004 1 CGGTCTA 120 0.0 37.500004 31 ACCGTAG 30 1.1400385E-4 37.500004 41 GTACGCT 30 1.1400385E-4 37.500004 38 >>END_MODULE