##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935781.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 495272 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.088420100470046 33.0 31.0 34.0 30.0 34.0 2 32.112081845935165 33.0 31.0 34.0 30.0 34.0 3 32.13606664620653 33.0 31.0 34.0 30.0 34.0 4 35.78564909786945 37.0 35.0 37.0 35.0 37.0 5 34.84400491043306 37.0 35.0 37.0 33.0 37.0 6 35.35191773409359 37.0 35.0 37.0 33.0 37.0 7 35.91086715986367 37.0 35.0 37.0 35.0 37.0 8 35.942183285144324 37.0 35.0 37.0 35.0 37.0 9 37.772617874622426 39.0 38.0 39.0 35.0 39.0 10 37.379900337592275 39.0 37.0 39.0 34.0 39.0 11 37.32725653782164 39.0 37.0 39.0 34.0 39.0 12 37.18892043160122 39.0 37.0 39.0 34.0 39.0 13 37.087949651908446 39.0 37.0 39.0 33.0 39.0 14 38.17144518567575 40.0 37.0 41.0 33.0 41.0 15 38.34021911192234 40.0 37.0 41.0 34.0 41.0 16 38.35064772488653 40.0 37.0 41.0 34.0 41.0 17 38.36174465748114 40.0 37.0 41.0 34.0 41.0 18 38.33843221502528 40.0 37.0 41.0 34.0 41.0 19 38.29922143791694 40.0 37.0 41.0 34.0 41.0 20 38.29822400620265 40.0 37.0 41.0 34.0 41.0 21 38.19456985252548 40.0 37.0 41.0 34.0 41.0 22 38.22358421231162 40.0 37.0 41.0 34.0 41.0 23 38.23579568398779 40.0 37.0 41.0 34.0 41.0 24 38.20158619909868 40.0 37.0 41.0 34.0 41.0 25 38.03506961831074 40.0 36.0 41.0 34.0 41.0 26 38.10297977676913 40.0 36.0 41.0 34.0 41.0 27 38.1000722835129 40.0 36.0 41.0 34.0 41.0 28 37.990645544266584 40.0 36.0 41.0 34.0 41.0 29 37.94964383207611 40.0 36.0 41.0 34.0 41.0 30 37.82056526514723 40.0 36.0 41.0 34.0 41.0 31 37.790896719378445 40.0 36.0 41.0 34.0 41.0 32 37.76547836340435 40.0 36.0 41.0 33.0 41.0 33 37.6344675249156 40.0 36.0 41.0 33.0 41.0 34 37.58352985834047 40.0 36.0 41.0 33.0 41.0 35 37.51453342809608 40.0 36.0 41.0 33.0 41.0 36 37.4839966725355 40.0 35.0 41.0 33.0 41.0 37 37.441097013358316 40.0 35.0 41.0 33.0 41.0 38 37.34357080553716 40.0 35.0 41.0 33.0 41.0 39 37.292205091343746 40.0 35.0 41.0 33.0 41.0 40 37.18319226606794 39.0 35.0 41.0 32.0 41.0 41 37.081926698864464 39.0 35.0 41.0 32.0 41.0 42 37.113967678366635 39.0 35.0 41.0 32.0 41.0 43 37.019451937521204 39.0 35.0 41.0 32.0 41.0 44 36.91049968502156 39.0 35.0 41.0 32.0 41.0 45 36.870737695650064 39.0 35.0 41.0 32.0 41.0 46 36.70884079859148 39.0 35.0 41.0 31.0 41.0 47 36.64545340742057 39.0 35.0 41.0 31.0 41.0 48 36.61150640456153 39.0 35.0 41.0 31.0 41.0 49 36.55780661939298 39.0 35.0 41.0 31.0 41.0 50 36.40747104621299 39.0 35.0 41.0 31.0 41.0 51 35.28130401072542 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 8.0 10 11.0 11 17.0 12 16.0 13 9.0 14 17.0 15 24.0 16 29.0 17 69.0 18 91.0 19 154.0 20 299.0 21 522.0 22 822.0 23 1171.0 24 1629.0 25 2349.0 26 3046.0 27 3758.0 28 4416.0 29 5203.0 30 6459.0 31 8241.0 32 10830.0 33 15911.0 34 30998.0 35 43151.0 36 34281.0 37 52044.0 38 96377.0 39 173193.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.87739262465877 22.33399021143937 24.283222148637517 11.50539501526434 2 31.174788802920418 24.34359301555509 25.77936972007301 18.702248461451486 3 31.50248752200811 23.807120127929704 27.487320098854774 17.20307225120742 4 28.482126992844336 26.485042562470724 26.13937391978549 18.89345652489945 5 24.602844497569013 30.85112826891082 25.616832770679547 18.92919446284062 6 25.426836162755013 33.8307031287858 25.163142677155182 15.579318031304009 7 79.3002632896671 6.304414543927376 9.190101600736565 5.205220565668966 8 80.41096609539808 4.8712626597102195 8.543991988240805 6.1737792566508904 9 73.72554878935212 7.60208531877433 11.35376116558174 7.318604726291815 10 40.52944644558949 26.1153467185708 19.127267440921354 14.227939394918348 11 29.240094332003423 26.464649727826327 24.505322327932934 19.789933612237316 12 26.135335734707393 22.052932530003716 31.17115443635013 20.640577298938766 13 23.513544072751944 25.576450919898562 30.93370915375793 19.976295853591562 14 19.037619732187565 29.74284837422669 29.72366699510572 21.495864898480026 15 18.173650034728393 25.577056647660275 36.14761181734481 20.10168150026652 16 19.786904973428744 26.419422054951625 31.64927554959699 22.144397422022646 17 20.875599670484096 24.745594340079794 28.502519827488733 25.876286161947377 18 21.680208047295224 25.475092474438288 31.156011242307258 21.68868823595923 19 22.958697443021208 26.01540163788787 28.24528743801386 22.780613481077065 20 23.51879371335347 26.648589058133716 28.726639099323197 21.105978129189616 21 23.186249172172058 26.398019674037698 30.304963737098 20.11076741669224 22 21.403592369445477 26.178140496535235 27.700738180232275 24.71752895378701 23 20.705390169442246 26.557124166114782 28.158668368088648 24.578817296354327 24 21.655978936826635 25.251982748873345 29.03899271511412 24.0530455991859 25 19.939952187888675 27.245028994168862 28.04358009336284 24.771438724579625 26 18.691143452486713 27.249269088500867 29.425043208580338 24.634544250432086 27 19.491107916458027 26.97144195512769 31.015078583081618 22.522371545332664 28 17.608506033048506 25.79330145859245 33.40164596423783 23.19654654412121 29 18.50982894248009 23.946033694616293 32.55948246620039 24.984654896703226 30 21.04742444555719 24.814849214169186 31.03325041593306 23.104475924340566 31 22.758605372401426 26.03074674118464 28.16977337705342 23.040874509360513 32 21.48132743219887 27.399287664152222 27.517808396194415 23.60157650745449 33 21.440945581417886 26.751966596133038 27.24341372013762 24.563674102311456 34 20.01728343213426 25.42037506663005 29.734368185562683 24.827973315673006 35 18.645713870358104 26.84666203621444 28.942883910255375 25.564740183172074 36 21.856474825954223 25.710720573745338 30.312636288746386 22.120168311554057 37 20.164677187484855 26.509675491447126 31.548724741152334 21.776922579915684 38 18.702248461451486 28.76722285935809 27.11984525674781 25.410683422442617 39 21.787623770372644 25.4674199227899 28.31736904165792 24.427587265179536 40 23.635497262110515 23.937149687444474 28.69756416676089 23.729788883684115 41 19.646779951218722 25.899505726146444 28.287890290587796 26.165824032047034 42 20.51155728569352 25.54232825598863 29.6491624804148 24.29695197790305 43 21.497480172511267 24.26908850086417 30.039453068213025 24.193978258411537 44 19.494944192282222 24.613141869518163 29.55244794779434 26.33946599040527 45 21.239440146020772 24.012058020643202 27.756061315802228 26.9924405175338 46 22.927401508665945 24.244859390395582 29.13086142564086 23.696877675297614 47 19.77660760147959 24.691078841525467 30.897163578801145 24.6351499781938 48 19.14241063496422 24.402954336203138 30.88827957162933 25.566355457203315 49 20.735272739020175 22.479162964997013 32.126992844336044 24.658571451646772 50 20.768385856660583 22.808880776623756 31.2931076257087 25.12962574100696 51 20.5969649000953 23.05056615354795 27.886494693824808 28.465974252531943 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 419.0 1 552.5 2 686.0 3 1200.0 4 1714.0 5 1229.5 6 745.0 7 746.0 8 747.0 9 768.0 10 789.0 11 861.5 12 934.0 13 886.0 14 838.0 15 877.0 16 916.0 17 911.5 18 907.0 19 1026.5 20 1146.0 21 1278.0 22 1410.0 23 1644.0 24 1878.0 25 2257.5 26 3235.5 27 3834.0 28 4851.5 29 5869.0 30 5757.0 31 5645.0 32 6803.0 33 7961.0 34 9841.5 35 11722.0 36 12331.0 37 12940.0 38 15164.5 39 17389.0 40 21220.5 41 25052.0 42 29750.0 43 34448.0 44 42043.0 45 49638.0 46 55433.5 47 61229.0 48 60181.5 49 59134.0 50 49946.5 51 40759.0 52 35525.0 53 30291.0 54 28122.5 55 25954.0 56 23602.0 57 21250.0 58 19843.0 59 18436.0 60 16659.5 61 14883.0 62 13091.5 63 11300.0 64 9708.5 65 8117.0 66 6731.5 67 5346.0 68 4456.5 69 3567.0 70 2816.0 71 2065.0 72 1714.5 73 1364.0 74 1056.0 75 505.0 76 262.0 77 204.5 78 147.0 79 108.5 80 70.0 81 51.0 82 32.0 83 37.5 84 43.0 85 23.5 86 4.0 87 2.0 88 0.0 89 1.0 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 495272.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.72365434809889 #Duplication Level Percentage of deduplicated Percentage of total 1 72.31863928018278 22.218928761691828 2 11.783166834715132 7.240438899115404 3 4.5032271075358485 4.150667793087616 4 2.1491535630882757 2.6411940485323724 5 1.2857388758121349 1.9751298401182635 6 0.8340344240061326 1.5374751214548101 7 0.6033103901481511 1.2975129924069935 8 0.43312074155122965 1.06456415635298 9 0.3709721605334219 1.0257858389696677 >10 5.008669966186512 39.22782564307744 >50 0.6462011324855034 12.214545370921858 >100 0.05784913495292401 3.2494968413241696 >500 0.003944259201335728 0.8230281327861265 >1k 0.001972129600667864 1.3334065601604927 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 2601 0.5251659694067099 No Hit CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 2464 0.4975044016217351 No Hit CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 1537 0.3103345232518697 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 904 0.18252596553005218 No Hit TCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 867 0.17505532313556996 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 641 0.12942383175305688 No Hit ACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 640 0.129221922499152 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCC 512 0.10337753799932159 No Hit GCTAGTAGGGACCCACTGTTTGTTTATTCATGTCAGCTGTTCAAATGCAAA 511 0.10317562874541666 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.057277617147749E-4 0.0 0.0 0.32244907848616516 0.0 2 8.076370156196999E-4 0.0 0.0 1.7156229304301476 0.0 3 8.076370156196999E-4 0.0 0.0 2.3480027136603723 0.0 4 8.076370156196999E-4 0.0 0.0 3.0710397518939088 0.0 5 8.076370156196999E-4 0.0 0.0 4.900741410780339 0.0 6 8.076370156196999E-4 0.0 0.0 5.86627146295369 0.0 7 8.076370156196999E-4 0.0 0.0 6.804543765849877 0.0 8 8.076370156196999E-4 0.0 0.0 8.250819751570853 0.0 9 8.076370156196999E-4 0.0 0.0 8.77416853769242 0.0 10 8.076370156196999E-4 0.0 0.0 10.005007349496843 0.0 11 8.076370156196999E-4 0.0 0.0 11.768078954594648 0.0 12 8.076370156196999E-4 0.0 0.0 13.216979760616388 0.0 13 8.076370156196999E-4 0.0 0.0 13.92830606212344 0.0 14 8.076370156196999E-4 0.0 0.0 14.282656802726583 0.0 15 8.076370156196999E-4 0.0 0.0 14.717367426383886 0.0 16 8.076370156196999E-4 0.0 0.0 15.617276971038137 0.0 17 8.076370156196999E-4 0.0 0.0 16.693857112859195 0.0 18 0.001009546269524625 0.0 0.0 18.05169684536982 0.0 19 0.001009546269524625 0.0 0.0 18.772714791064303 0.0 20 0.001009546269524625 0.0 0.0 19.45153370269266 0.0 21 0.001009546269524625 0.0 0.0 20.30298502640973 0.0 22 0.001009546269524625 0.0 0.0 21.157868807443183 0.0 23 0.001009546269524625 0.0 0.0 21.99619602965643 0.0 24 0.001009546269524625 0.0 0.0 22.662900386050495 0.0 25 0.001009546269524625 0.0 0.0 23.248235313120873 0.0 26 0.001009546269524625 0.0 0.0 23.7946017541876 0.0 27 0.001009546269524625 0.0 0.0 24.373273675879112 0.0 28 0.001009546269524625 0.0 0.0 24.92085157246927 0.0 29 0.001009546269524625 0.0 0.0 25.483976481610107 0.0 30 0.001009546269524625 0.0 0.0 26.10403980035213 0.0 31 0.001009546269524625 0.0 0.0 26.714209565652812 0.0 32 0.001009546269524625 0.0 0.0 27.281776478379555 0.0 33 0.001009546269524625 0.0 0.0 27.842882294981344 0.0 34 0.001009546269524625 0.0 0.0 28.400555654266746 0.0 35 0.001009546269524625 0.0 0.0 29.004668141950283 0.0 36 0.001009546269524625 0.0 0.0 29.53791048151319 0.0 37 0.001009546269524625 0.0 0.0 30.10689075901727 0.0 38 0.001009546269524625 0.0 0.0 30.647805650228563 0.0 39 0.001009546269524625 0.0 0.0 31.22991002923646 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGG 55 1.8189894E-12 45.000004 2 CCCGCAT 30 2.1629894E-6 45.000004 23 CGGGTCG 25 3.88758E-5 45.0 6 TCGTTTG 25 3.88758E-5 45.0 1 CAGCGCG 20 7.0293946E-4 45.0 1 AGATCGG 40 6.8012014E-9 45.0 2 CACGGAC 20 7.0293946E-4 45.0 42 GCAACGT 20 7.0293946E-4 45.0 17 CAACCCG 45 3.8380676E-10 45.0 23 GACCCGT 40 6.8012014E-9 45.0 41 TTAAGCG 25 3.88758E-5 45.0 1 CCATACG 20 7.0293946E-4 45.0 2 GACGGTC 35 1.2100645E-7 45.0 29 CTCGCTA 25 3.88758E-5 45.0 21 CTCGCGG 20 7.0293946E-4 45.0 2 CTCGAGG 20 7.0293946E-4 45.0 2 CGTAAGT 20 7.0293946E-4 45.0 20 CGTAAAT 20 7.0293946E-4 45.0 16 ATAACGG 40 6.8012014E-9 45.0 2 ACGTAGG 25 3.88758E-5 45.0 2 >>END_MODULE