##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935780.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 513944 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90938117771586 33.0 31.0 34.0 30.0 34.0 2 31.94104610619056 33.0 31.0 34.0 30.0 34.0 3 31.975649097956197 33.0 31.0 34.0 30.0 34.0 4 35.655688168360754 37.0 35.0 37.0 33.0 37.0 5 34.75386812571019 37.0 35.0 37.0 33.0 37.0 6 35.24377753218249 37.0 35.0 37.0 33.0 37.0 7 35.844090017589465 37.0 35.0 37.0 35.0 37.0 8 35.85774325607459 37.0 35.0 37.0 35.0 37.0 9 37.69212988185483 39.0 37.0 39.0 35.0 39.0 10 37.29157845991003 39.0 37.0 39.0 34.0 39.0 11 37.213604984200614 39.0 37.0 39.0 34.0 39.0 12 37.02215221891879 39.0 37.0 39.0 34.0 39.0 13 36.90432420652834 39.0 37.0 39.0 33.0 39.0 14 37.91447706364896 40.0 37.0 41.0 33.0 41.0 15 38.07461318742898 40.0 37.0 41.0 33.0 41.0 16 38.09357634294787 40.0 37.0 41.0 34.0 41.0 17 38.07923236772878 40.0 36.0 41.0 34.0 41.0 18 38.0911266597139 40.0 37.0 41.0 34.0 41.0 19 38.032653363012315 40.0 36.0 41.0 34.0 41.0 20 38.03766169076786 40.0 36.0 41.0 34.0 41.0 21 37.93301021122924 40.0 36.0 41.0 34.0 41.0 22 37.98260705446508 40.0 36.0 41.0 34.0 41.0 23 37.99918084460564 40.0 36.0 41.0 34.0 41.0 24 37.96836814905904 40.0 36.0 41.0 34.0 41.0 25 37.801661270488616 40.0 36.0 41.0 34.0 41.0 26 37.85654662764815 40.0 36.0 41.0 34.0 41.0 27 37.86960447052597 40.0 36.0 41.0 34.0 41.0 28 37.77904985757203 40.0 36.0 41.0 34.0 41.0 29 37.77738625219868 40.0 36.0 41.0 34.0 41.0 30 37.60724514733123 40.0 36.0 41.0 33.0 41.0 31 37.56546822221876 40.0 35.0 41.0 33.0 41.0 32 37.515563952492876 40.0 35.0 41.0 33.0 41.0 33 37.27810422925455 39.0 35.0 41.0 33.0 41.0 34 37.25000778294911 39.0 35.0 41.0 33.0 41.0 35 37.22210591037156 39.0 35.0 41.0 33.0 41.0 36 37.0671143159566 39.0 35.0 41.0 32.0 41.0 37 37.05946367697648 39.0 35.0 41.0 32.0 41.0 38 36.96057547125757 39.0 35.0 41.0 32.0 41.0 39 36.87299005339103 39.0 35.0 41.0 31.0 41.0 40 36.80246680572203 39.0 35.0 41.0 31.0 41.0 41 36.711293448313434 39.0 35.0 41.0 31.0 41.0 42 36.69076397428513 39.0 35.0 41.0 31.0 41.0 43 36.55227028625687 39.0 35.0 41.0 31.0 41.0 44 36.445527139143564 39.0 35.0 40.0 31.0 41.0 45 36.433045234500256 39.0 35.0 40.0 31.0 41.0 46 36.28760915586134 39.0 35.0 40.0 31.0 41.0 47 36.16078989150569 38.0 35.0 40.0 30.0 41.0 48 36.1143412511869 38.0 35.0 40.0 30.0 41.0 49 36.0543658453061 38.0 35.0 40.0 30.0 41.0 50 35.919750011674424 38.0 35.0 40.0 30.0 41.0 51 34.6576183397413 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 11.0 10 7.0 11 16.0 12 13.0 13 7.0 14 15.0 15 13.0 16 32.0 17 53.0 18 92.0 19 233.0 20 363.0 21 606.0 22 903.0 23 1345.0 24 1936.0 25 2710.0 26 3500.0 27 4458.0 28 5063.0 29 6220.0 30 7720.0 31 9886.0 32 13101.0 33 19285.0 34 35727.0 35 47600.0 36 38915.0 37 59197.0 38 104833.0 39 150013.0 40 69.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.500933953893814 21.038673474152823 25.056037233628565 11.404355338324798 2 31.013106486309795 25.1385364942484 25.747163115047556 18.101193904394254 3 31.78556418598135 24.282217517861866 27.571097240166242 16.361121055990534 4 29.158235138458664 24.87683483025388 26.61612938374609 19.348800647541367 5 23.98763289385614 31.2884283112557 26.08533225409772 18.638606540790438 6 24.58108276388089 33.643354139750635 26.204216801830547 15.571346294537927 7 77.83980355836434 6.131407312858989 10.593177466805722 5.435611661970954 8 78.14547888485906 5.0600843671684075 9.853019005961738 6.9414177420108025 9 72.41859035225627 7.1383263546222935 12.68426132029949 7.758821972821941 10 40.74218202761391 24.32716404900145 20.017355976526627 14.913297946858023 11 30.115537879613342 25.112463614712887 24.430093551048362 20.341904954625406 12 26.415523870304934 22.202029793129213 31.407507432716404 19.974938903849445 13 22.792561057235808 26.950796195694473 31.825646373924005 18.43099637314571 14 19.40055725915664 29.20084678486372 30.36731628348614 21.031279672493504 15 18.457652973864857 25.645595629095773 36.415056893358035 19.481694503681336 16 19.89321793814112 26.065291160126396 30.9936491135221 23.047841788210388 17 19.560107716015754 25.40607537007923 28.56361782606665 26.470199087838363 18 21.750229596998892 25.24633033949224 31.67777034073751 21.325669722771355 19 22.00901265507526 26.405211462727458 28.57101162772598 23.014764254471302 20 23.291058948056598 26.608735582086762 29.337826689289102 20.762378780567534 21 22.620168734336815 27.200045141104866 30.49573494388494 19.684051180673382 22 21.151137088865713 25.42203041576514 28.24607350217144 25.180758993197706 23 19.98583503261056 26.679560419033983 28.191398284638012 25.14320626371745 24 22.657916037544947 23.940546051709912 29.60614386003144 23.795394050713696 25 19.293152561368554 26.5256526002833 28.142365705213017 26.038829133135128 26 20.32945223604128 26.734624784023165 28.448624752891366 24.487298227044192 27 21.122145603412047 26.347812213003753 28.025232321031083 24.504809862553117 28 18.548908052239156 25.164220226328162 32.3688962221565 23.917975499276185 29 22.65188425198076 24.35284778108121 28.995766075681395 23.999501891256635 30 21.866195538813567 26.24955248042588 28.532680603334214 23.351571377426332 31 25.327856731472693 25.476316485842815 26.247023021963482 22.948803760721013 32 27.513892564170416 26.077354731254765 25.261701663994522 21.147051040580298 33 23.169450368133493 25.33680712295503 27.99234936101988 23.5013931478916 34 23.70861416808057 23.77457466183086 29.586297339787993 22.930513830300576 35 24.42970440359261 23.258954282956896 26.79299690238625 25.51834441106424 36 25.467949815544106 23.46208925486045 29.407289510141183 21.66267141945426 37 24.16547328113569 24.04094609529443 30.05230141805333 21.741279205516552 38 23.144739504693117 27.02979312921252 26.47681459458618 23.34865277150818 39 24.376002054698567 24.71514406238812 29.412932148249617 21.495921734663696 40 26.38750525349065 23.439518702426724 27.777539965443705 22.395436078638916 41 23.395155892470775 23.231908534782 27.016756689444765 26.356178883302462 42 24.303815201656214 21.90180253101505 29.554970969599804 24.239411297728935 43 24.23260121725324 21.7383605995984 29.600501221923007 24.428536961225348 44 22.273632924987936 23.188324019737557 29.14247466650063 25.395568388773874 45 24.055149977429448 22.472487274878198 26.487127002163657 26.985235745528698 46 25.96489111654188 23.276465918465824 27.728312812290834 23.03033015270146 47 21.85841258969849 22.42034151580717 32.3292031816696 23.392042712824743 48 22.944133991251967 21.086733184938435 31.044432856497984 24.924699967311614 49 22.88420528306586 20.403001105178774 33.65561228460688 23.05718132714848 50 22.841593636660804 20.669177964914464 31.282591099419392 25.20663729900534 51 21.950835110440046 21.12389676696294 27.56156312750027 29.36370499509674 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 514.0 1 631.5 2 749.0 3 1320.0 4 1891.0 5 1334.5 6 778.0 7 780.0 8 782.0 9 833.5 10 885.0 11 939.5 12 994.0 13 1026.5 14 1059.0 15 1009.0 16 959.0 17 947.0 18 935.0 19 951.0 20 967.0 21 961.5 22 956.0 23 1397.0 24 1838.0 25 2085.5 26 2844.5 27 3356.0 28 3591.5 29 3827.0 30 4642.0 31 5457.0 32 6734.5 33 8012.0 34 9631.0 35 11250.0 36 12127.0 37 13004.0 38 14270.0 39 15536.0 40 17751.5 41 19967.0 42 23287.0 43 26607.0 44 29523.0 45 32439.0 46 36588.5 47 40738.0 48 47840.5 49 54943.0 50 61083.0 51 67223.0 52 65251.5 53 63280.0 54 51516.5 55 39753.0 56 33747.5 57 27742.0 58 24531.0 59 21320.0 60 18042.5 61 14765.0 62 12513.0 63 10261.0 64 8764.0 65 7267.0 66 5749.0 67 4231.0 68 3539.0 69 2847.0 70 2287.0 71 1727.0 72 1474.0 73 1221.0 74 1088.5 75 649.0 76 342.0 77 241.0 78 140.0 79 99.0 80 58.0 81 39.0 82 20.0 83 12.0 84 4.0 85 3.5 86 3.0 87 3.0 88 3.0 89 3.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 513944.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.486518672543433 #Duplication Level Percentage of deduplicated Percentage of total 1 69.9682310453561 22.030560132944387 2 12.894659177884375 8.120158539610799 3 5.145534280322775 4.860448835927862 4 2.555368479650072 3.218386293989237 5 1.5101773297342647 2.377511334576486 6 0.9730488223299838 1.838275194815366 7 0.6805764144718808 1.5000287387653073 8 0.5455429913352899 1.3741799666683046 9 0.39422656962363267 1.1171540021100528 >10 4.753691773551281 36.706911476580395 >50 0.5091239352934931 9.925900441800072 >100 0.061169016497640546 3.361160736421863 >500 0.006178688535115207 1.4468340798037502 >1k 0.002471475414046083 2.122490225986139 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 3739 0.7275111685319802 No Hit CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 3559 0.6924878975141261 No Hit CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGCT 2106 0.4097722709088928 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 1506 0.2930280341827125 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 994 0.19340628550970534 No Hit ACTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 934 0.1817318618370873 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGC 897 0.17453263390563953 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTC 874 0.17005743816446928 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCG 827 0.16091247295425182 No Hit CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 679 0.1321155612284607 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCC 645 0.1255000544806438 No Hit GCCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 577 0.11226904098501005 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.837211836309014E-4 0.0 0.0 0.4329265445262519 0.0 2 5.837211836309014E-4 0.0 0.0 2.451434397521909 0.0 3 7.782949115078685E-4 0.0 0.0 3.2593045156670764 0.0 4 7.782949115078685E-4 0.0 0.0 4.2111591924412 0.0 5 7.782949115078685E-4 0.0 0.0 6.655783509487415 0.0 6 7.782949115078685E-4 0.0 0.0 7.80065532431549 0.0 7 7.782949115078685E-4 0.0 0.0 9.033085316688199 0.0 8 7.782949115078685E-4 0.0 0.0 10.891653565368989 0.0 9 7.782949115078685E-4 0.0 0.0 11.525769344520025 0.0 10 7.782949115078685E-4 0.0 0.0 13.16855532898526 0.0 11 7.782949115078685E-4 0.0 0.0 15.346419065112153 0.0 12 7.782949115078685E-4 0.0 0.0 17.332627679280233 0.0 13 7.782949115078685E-4 0.0 0.0 18.05002101396261 0.0 14 7.782949115078685E-4 0.0 0.0 18.351804865899787 0.0 15 7.782949115078685E-4 0.0 0.0 18.901281073424343 0.0 16 7.782949115078685E-4 0.0 0.0 20.021247451084164 0.0 17 7.782949115078685E-4 0.0 0.0 21.445721712871443 0.0 18 7.782949115078685E-4 0.0 0.0 23.10290615319957 0.0 19 7.782949115078685E-4 0.0 0.0 23.990551499774295 0.0 20 7.782949115078685E-4 0.0 0.0 24.82741310337313 0.0 21 7.782949115078685E-4 0.0 0.0 25.87441433307909 0.0 22 7.782949115078685E-4 0.0 0.0 26.871020967264915 0.0 23 7.782949115078685E-4 0.0 0.0 27.865487290444094 0.0 24 7.782949115078685E-4 0.0 0.0 28.67744345687468 0.0 25 7.782949115078685E-4 0.0 0.0 29.414294164344753 0.0 26 7.782949115078685E-4 0.0 0.0 30.111062683872174 0.0 27 7.782949115078685E-4 0.0 0.0 30.735255202901484 0.0 28 7.782949115078685E-4 0.0 0.0 31.376764783711845 0.0 29 7.782949115078685E-4 0.0 0.0 32.02333328144701 0.0 30 7.782949115078685E-4 0.0 0.0 32.805519667512414 0.0 31 9.728686393848357E-4 0.0 0.0 33.531863393677135 0.0 32 9.728686393848357E-4 0.0 0.0 34.202753607396915 0.0 33 0.0011674423672618029 0.0 0.0 34.87403296857245 0.0 34 0.0011674423672618029 0.0 0.0 35.52974643151783 0.0 35 0.0011674423672618029 0.0 0.0 36.22846068832402 0.0 36 0.0011674423672618029 0.0 0.0 36.878142365705216 0.0 37 0.0011674423672618029 0.0 0.0 37.508950391482344 0.0 38 0.0011674423672618029 0.0 0.0 38.14150958081036 0.0 39 0.00136201609513877 0.0 0.0 38.81492925299254 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAACGG 30 2.1631495E-6 45.000004 2 TATTGCG 30 2.1631495E-6 45.000004 1 CTAATGG 70 0.0 45.000004 2 TGATATC 25 3.887785E-5 45.0 24 AGGTACG 25 3.887785E-5 45.0 1 TCTTGCG 25 3.887785E-5 45.0 1 GTCGATA 25 3.887785E-5 45.0 40 AACCCAC 20 7.0296414E-4 45.0 41 CGCATGT 20 7.0296414E-4 45.0 44 ATTACGG 25 3.887785E-5 45.0 2 TAAACCG 20 7.0296414E-4 45.0 9 TTACTAG 25 3.887785E-5 45.0 1 CGATTCA 100 0.0 45.0 10 TAACGCG 20 7.0296414E-4 45.0 1 CCATGCG 20 7.0296414E-4 45.0 1 AAACGAT 20 7.0296414E-4 45.0 11 TACGATG 20 7.0296414E-4 45.0 1 ACTACGG 40 6.8030204E-9 45.0 2 TCGTCAA 20 7.0296414E-4 45.0 40 ACAGACG 25 3.887785E-5 45.0 1 >>END_MODULE