##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935770.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 596810 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90314170338969 33.0 31.0 34.0 30.0 34.0 2 31.95347095390493 33.0 31.0 34.0 30.0 34.0 3 31.98914729981066 33.0 31.0 34.0 30.0 34.0 4 35.6754528241819 37.0 35.0 37.0 33.0 37.0 5 34.71834922337092 37.0 35.0 37.0 33.0 37.0 6 35.22638360617282 37.0 35.0 37.0 33.0 37.0 7 35.82360550258876 37.0 35.0 37.0 35.0 37.0 8 35.80198388096714 37.0 35.0 37.0 35.0 37.0 9 37.67179671922387 39.0 37.0 39.0 35.0 39.0 10 37.29571052763861 39.0 37.0 39.0 34.0 39.0 11 37.22295202828371 39.0 37.0 39.0 34.0 39.0 12 37.13636500728875 39.0 37.0 39.0 34.0 39.0 13 37.025212379149146 39.0 37.0 39.0 33.0 39.0 14 38.062571002496604 40.0 37.0 41.0 33.0 41.0 15 38.12281295554699 40.0 37.0 41.0 33.0 41.0 16 38.20852365074312 40.0 37.0 41.0 34.0 41.0 17 38.18446574286624 40.0 37.0 41.0 34.0 41.0 18 38.19642097149847 40.0 37.0 41.0 34.0 41.0 19 38.13418843518038 40.0 37.0 41.0 34.0 41.0 20 38.12693151924398 40.0 37.0 41.0 34.0 41.0 21 38.10745463380305 40.0 37.0 41.0 34.0 41.0 22 38.145386303848795 40.0 37.0 41.0 34.0 41.0 23 38.13639516764129 40.0 37.0 41.0 34.0 41.0 24 38.07589852716945 40.0 37.0 41.0 34.0 41.0 25 37.96752232703876 40.0 36.0 41.0 34.0 41.0 26 37.99642432264875 40.0 37.0 41.0 34.0 41.0 27 37.971466630921064 40.0 37.0 41.0 34.0 41.0 28 37.91678256061393 40.0 36.0 41.0 34.0 41.0 29 37.886590372145236 40.0 36.0 41.0 34.0 41.0 30 37.71390727367169 40.0 36.0 41.0 33.0 41.0 31 37.69674435750071 40.0 36.0 41.0 33.0 41.0 32 37.54408940868953 40.0 36.0 41.0 33.0 41.0 33 37.409195556374726 40.0 36.0 41.0 33.0 41.0 34 37.374402238568386 40.0 36.0 41.0 33.0 41.0 35 37.222417519813675 39.0 35.0 41.0 32.0 41.0 36 37.18280189675106 39.0 35.0 41.0 32.0 41.0 37 37.09568706958664 39.0 35.0 41.0 32.0 41.0 38 37.04350128181498 39.0 35.0 41.0 32.0 41.0 39 37.066461687974396 39.0 35.0 41.0 32.0 41.0 40 36.9174896533235 39.0 35.0 41.0 31.0 41.0 41 36.84203850471675 39.0 35.0 41.0 31.0 41.0 42 36.864352138871666 39.0 35.0 41.0 31.0 41.0 43 36.78330624486855 39.0 35.0 41.0 31.0 41.0 44 36.697310701898424 39.0 35.0 41.0 31.0 41.0 45 36.671007523332385 39.0 35.0 41.0 31.0 41.0 46 36.560290544729476 39.0 35.0 41.0 31.0 41.0 47 36.41329568874516 39.0 35.0 40.0 31.0 41.0 48 36.36576967544109 39.0 35.0 40.0 31.0 41.0 49 36.37243008662723 39.0 35.0 40.0 31.0 41.0 50 36.239468172450195 39.0 35.0 40.0 30.0 41.0 51 34.96716542953369 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 10.0 10 8.0 11 5.0 12 11.0 13 8.0 14 7.0 15 25.0 16 29.0 17 67.0 18 108.0 19 249.0 20 488.0 21 738.0 22 1066.0 23 1516.0 24 2151.0 25 2915.0 26 3930.0 27 4650.0 28 5536.0 29 6937.0 30 8617.0 31 11414.0 32 15443.0 33 21725.0 34 37093.0 35 49420.0 36 45091.0 37 69421.0 38 123031.0 39 184990.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.75548331964947 21.27729093011176 25.131783984852802 10.83544176538597 2 29.385063923191634 28.225901040532165 24.813424708031032 17.57561032824517 3 28.854744391012215 27.36716878068397 27.811531308121513 15.966555520182302 4 28.517618672609373 23.81360902129656 29.861262378311356 17.80750992778271 5 26.107136274526233 29.237780868283036 25.543305239523466 19.111777617667265 6 23.802047552822504 35.195623397731275 24.976625726780718 16.025703322665503 7 74.84660109582613 5.531743771049412 13.894204185586704 5.727450947537743 8 74.93004473785628 7.568740470166385 10.214976290611752 7.2862385013655935 9 69.56250733064124 6.914093262512358 12.498450092994421 11.02494931385198 10 39.05782409812168 25.45718067726747 20.40314337896483 15.08185184564602 11 28.329786699284533 24.69194551029641 26.581994269533016 20.396273520886044 12 24.385147701948696 21.238082471808447 32.8870159682311 21.489753858011763 13 21.721988572577537 24.464737521154138 35.2810777299308 18.53219617633753 14 18.40636048323587 29.264925185569947 30.73490725691594 21.593807074278246 15 16.870528308842008 25.80687320922907 38.244835039627354 19.07776344230157 16 18.28287059533185 26.15170657328128 31.26455655903889 24.300866272347985 17 18.576766475092576 26.080327072267558 30.33511502823344 25.007791424406427 18 19.163888004557563 25.408756555687738 33.07451282652771 22.35284261322699 19 19.410197550309142 27.100417218210147 30.137229604061595 23.352155627419112 20 21.126656724920828 27.336170640572377 32.146746870863424 19.39042576364337 21 21.033997419614284 28.234949146294465 31.366431527621856 19.364621906469395 22 18.89378529180141 24.723446322950352 30.574722273420353 25.80804611182789 23 18.656021179269786 27.26093731673397 30.158676965868537 23.924364538127712 24 22.1113922353848 23.786632261523767 29.494646537423968 24.607328965667467 25 19.21013387845378 28.77347899666561 27.277022838089177 24.73936428679144 26 19.751512206564904 26.30183810592986 29.093848963656775 24.85280072384846 27 20.509709957943066 28.740302608870493 28.604581022435948 22.14540641075049 28 16.122886680853203 26.503577352926396 33.658953435766826 23.71458253045358 29 21.119451751813813 26.771501817999027 29.281345821953387 22.827700608233776 30 20.551599336472247 31.06985472763526 28.693218947403697 19.6853269884888 31 22.94566109817195 27.924800187664417 27.391967292773245 21.737571421390392 32 23.331881168210987 30.989092005831004 26.4305222767715 19.248504549186507 33 22.383170523282118 29.27062214104992 25.755768167423472 22.5904391682445 34 24.54717581809956 24.847606440910845 29.67778690035355 20.92743084063605 35 21.027630234077847 27.267136944756288 28.496003753288317 23.209229067877548 36 27.31556106633602 25.819942695330173 27.885424171846985 18.97907206648682 37 20.94988354752769 28.129387912400933 32.59596856621035 18.324759973861028 38 19.39712806420804 29.79993632814464 28.833464586719394 21.969471020927934 39 24.731153968599724 27.133593606005263 27.83163820981552 20.303614215579497 40 23.843099143781103 24.192289003200347 30.866775020525793 21.097836832492753 41 23.97697759756036 24.010656657897826 26.989494143864885 25.022871600676933 42 23.17705802516714 23.20302943985523 31.744273721955064 21.87563881302257 43 25.220086794792312 23.60416212865066 28.345537105611502 22.830213970945525 44 21.60184983495585 24.89050116452472 29.144786447948256 24.362862552571173 45 21.025619543908448 23.997754729310834 28.222214775221595 26.75441095155912 46 25.324810241115266 24.84827667096731 28.649486436219235 21.177426651698195 47 19.830599353227996 24.495903218779848 34.48132571505169 21.192171712940468 48 20.841641393408285 24.00831085270019 30.502840099864276 24.647207654027245 49 22.48269968666745 21.053936763794173 34.61704730148624 21.846316248052144 50 22.839932306764297 20.617952112062465 31.7015465558553 24.84056902531794 51 21.0802432935105 20.993113386169803 27.500712119434993 30.425931200884705 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 533.0 1 660.0 2 787.0 3 1466.0 4 2145.0 5 1436.5 6 728.0 7 763.5 8 799.0 9 853.5 10 908.0 11 986.0 12 1064.0 13 1128.5 14 1193.0 15 1151.5 16 1110.0 17 1095.5 18 1081.0 19 1148.5 20 1216.0 21 1388.0 22 1560.0 23 1956.0 24 2352.0 25 3222.5 26 4379.0 27 4665.0 28 5871.5 29 7078.0 30 7245.0 31 7412.0 32 8848.5 33 10285.0 34 11911.5 35 13538.0 36 14930.0 37 16322.0 38 18655.5 39 20989.0 40 26389.5 41 31790.0 42 37999.0 43 44208.0 44 64224.5 45 84241.0 46 82678.0 47 81115.0 48 77995.0 49 74875.0 50 60805.5 51 46736.0 52 39942.0 53 33148.0 54 28320.0 55 23492.0 56 21358.0 57 19224.0 58 17811.5 59 16399.0 60 14492.5 61 12586.0 62 11073.5 63 9561.0 64 8122.5 65 6684.0 66 5684.5 67 4685.0 68 3915.0 69 3145.0 70 2685.5 71 2226.0 72 1724.5 73 1223.0 74 1058.5 75 595.5 76 297.0 77 265.5 78 234.0 79 152.5 80 71.0 81 81.5 82 92.0 83 58.0 84 24.0 85 13.0 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 596810.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.72032581184061 #Duplication Level Percentage of deduplicated Percentage of total 1 68.59886431447946 20.387805977485755 2 13.114119426510623 7.79511804182568 3 5.513268231869714 4.915683844177148 4 2.8290828311677974 3.3632505396396564 5 1.6369047163634818 2.4324670746630606 6 1.0615211174864068 1.8929252080707084 7 0.7666079259720514 1.594868613088013 8 0.5695494539337059 1.3541756269492513 9 0.4340184469766688 1.1609252687246097 >10 4.93760048197121 34.48547910606026 >50 0.4483413422481301 8.325420664773214 >100 0.07651843388558388 4.300338689861368 >500 0.0068016385676074554 1.487801289127844 >1k 0.004534425711738304 2.518750551974584 >5k 0.002267212855869152 3.984989503578836 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGC 6628 1.1105712035656239 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCG 6140 1.0288031366766643 No Hit GCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 5562 0.9319548935171997 TruSeq Adapter, Index 15 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC 5326 0.8924113201856537 No Hit CCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 4507 0.7551817161240596 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCT 2702 0.45274040314337893 TruSeq Adapter, Index 21 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 1827 0.3061275782912485 TruSeq Adapter, Index 15 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCT 1289 0.2159816356964528 No Hit ACTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 1222 0.20475528225063255 TruSeq Adapter, Index 21 (95% over 21bp) TTGTGCGGGATATTGTGTGTAGGAGGAAACTTGAGTTTGGGGAATTATGTT 1169 0.19587473400244632 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1154 0.19336137129069553 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGATAAGTGT 1082 0.18129723027429165 No Hit CGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTG 932 0.15616360315678357 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGATAAGTGTCGTA 926 0.15515825807208325 No Hit GAACTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCT 909 0.152309780332099 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTC 894 0.14979641762034818 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCC 816 0.13672693151924398 No Hit GCCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTG 745 0.12483034801695683 TruSeq Adapter, Index 15 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTG 688 0.11527956971230376 No Hit AGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTG 652 0.1092474992041018 No Hit GGTTCGGGATGTGTGCTGTACTAGGCTTCATGATGCATTTCTAAATTTGTG 644 0.10790703909116806 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.026725423501616E-4 0.0 0.0 0.4800522779444044 0.0 2 5.026725423501616E-4 0.0 0.0 2.824181900437325 0.0 3 5.026725423501616E-4 0.0 0.0 3.753623431242774 0.0 4 5.026725423501616E-4 0.0 0.0 4.878604581022436 0.0 5 5.026725423501616E-4 0.0 0.0 8.194232670364103 0.0 6 5.026725423501616E-4 0.0 0.0 9.503191970643924 0.0 7 5.026725423501616E-4 0.0 0.0 10.983897722893383 0.0 8 5.026725423501616E-4 0.0 0.0 12.999111945175182 0.0 9 5.026725423501616E-4 0.0 0.0 13.63633317136107 0.0 10 5.026725423501616E-4 0.0 0.0 16.251570851694844 0.0 11 5.026725423501616E-4 0.0 0.0 18.589500846165446 0.0 12 5.026725423501616E-4 0.0 0.0 21.515557715185736 0.0 13 5.026725423501616E-4 0.0 0.0 22.2858196075803 0.0 14 5.026725423501616E-4 0.0 0.0 22.580385717397498 0.0 15 5.026725423501616E-4 0.0 0.0 23.233524907424474 0.0 16 5.026725423501616E-4 0.0 0.0 24.38280189675106 0.0 17 5.026725423501616E-4 0.0 0.0 25.791122802902095 0.0 18 5.026725423501616E-4 0.0 0.0 27.50456594225968 0.0 19 5.026725423501616E-4 0.0 0.0 28.68081969135906 0.0 20 5.026725423501616E-4 0.0 0.0 29.604396709170423 0.0 21 5.026725423501616E-4 0.0 0.0 30.622141049915385 0.0 22 5.026725423501616E-4 0.0 0.0 31.748630217322095 0.0 23 5.026725423501616E-4 0.0 0.0 32.82300899783851 0.0 24 5.026725423501616E-4 0.0 0.0 33.67101757678323 0.0 25 5.026725423501616E-4 0.0 0.0 34.41111911663678 0.0 26 5.026725423501616E-4 0.0 0.0 35.09425110169065 0.0 27 5.026725423501616E-4 0.0 0.0 35.86903704696637 0.0 28 5.026725423501616E-4 0.0 0.0 36.50575560060991 0.0 29 5.026725423501616E-4 0.0 0.0 37.205978452103686 0.0 30 5.026725423501616E-4 0.0 0.0 38.009081617265124 0.0 31 5.026725423501616E-4 0.0 0.0 38.70008880548248 0.0 32 5.026725423501616E-4 0.0 0.0 39.35758449087649 0.0 33 5.026725423501616E-4 0.0 0.0 39.98006065582011 0.0 34 5.026725423501616E-4 0.0 0.0 40.61661165194953 0.0 35 5.026725423501616E-4 0.0 0.0 41.3428059181314 0.0 36 5.026725423501616E-4 0.0 0.0 42.011192841943 0.0 37 6.702300564668822E-4 0.0 0.0 42.65595415626414 0.0 38 8.377875705836028E-4 0.0 0.0 43.26536083510665 0.0 39 8.377875705836028E-4 0.0 0.0 43.99071731371794 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATCT 30 2.1637406E-6 45.000004 15 GTAAGCG 30 2.1637406E-6 45.000004 1 ATCTCGA 25 3.888543E-5 45.0 12 TTAGACG 20 7.0305576E-4 45.0 1 CGCATCG 25 3.888543E-5 45.0 21 GACGGTC 20 7.0305576E-4 45.0 29 GAACGTA 20 7.0305576E-4 45.0 1 ACGCTAG 20 7.0305576E-4 45.0 1 CGGTCTA 20 7.0305576E-4 45.0 31 CGCACCA 20 7.0305576E-4 45.0 39 AACTACG 20 7.0305576E-4 45.0 13 ACCCCTA 25 3.888543E-5 45.0 28 GTAACGT 25 3.888543E-5 45.0 13 GCGTAAG 45 3.8380676E-10 45.0 1 GTTATCG 20 7.0305576E-4 45.0 18 TGATTAG 75 0.0 42.0 1 CTATAGG 135 0.0 41.666668 2 TAGGGCA 180 0.0 41.25 5 AGGGCTC 165 0.0 40.909092 6 CTCCCAT 50 1.0804797E-9 40.5 38 >>END_MODULE