##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935767.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1165489 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08754265377022 33.0 31.0 34.0 30.0 34.0 2 32.1990992621981 34.0 31.0 34.0 30.0 34.0 3 32.10802933361018 33.0 31.0 34.0 30.0 34.0 4 35.81654910513956 37.0 35.0 37.0 35.0 37.0 5 34.99988073675513 37.0 35.0 37.0 33.0 37.0 6 35.41356374877841 37.0 35.0 37.0 33.0 37.0 7 35.915833611471236 37.0 35.0 37.0 35.0 37.0 8 35.894223797908005 37.0 35.0 37.0 35.0 37.0 9 37.760510824211984 39.0 38.0 39.0 35.0 39.0 10 37.513727714289885 39.0 37.0 39.0 35.0 39.0 11 37.38576425860733 39.0 37.0 39.0 35.0 39.0 12 37.193883425755196 39.0 37.0 39.0 34.0 39.0 13 37.0815666213924 39.0 37.0 39.0 33.0 39.0 14 38.00910090099521 40.0 37.0 41.0 33.0 41.0 15 38.00217333668529 40.0 37.0 41.0 33.0 41.0 16 38.06427087685941 40.0 37.0 41.0 33.0 41.0 17 38.0401839914405 40.0 37.0 41.0 33.0 41.0 18 37.925500798377335 39.0 37.0 41.0 33.0 41.0 19 37.8129317393815 39.0 37.0 41.0 34.0 41.0 20 37.668050921115515 39.0 35.0 41.0 33.0 41.0 21 37.61228205500009 39.0 35.0 41.0 33.0 41.0 22 37.59040111060679 39.0 35.0 41.0 33.0 41.0 23 37.557487887058564 39.0 35.0 41.0 33.0 41.0 24 37.55712237524335 39.0 35.0 41.0 33.0 41.0 25 37.449901286069625 39.0 35.0 41.0 33.0 41.0 26 37.45320118851401 39.0 35.0 41.0 33.0 41.0 27 37.47066510280234 39.0 35.0 41.0 33.0 41.0 28 37.338004048086255 39.0 35.0 41.0 33.0 41.0 29 37.24691610131026 39.0 35.0 41.0 33.0 41.0 30 37.056107779653004 39.0 35.0 41.0 33.0 41.0 31 36.86936813646461 39.0 35.0 41.0 32.0 41.0 32 36.59524971921657 39.0 35.0 41.0 31.0 41.0 33 36.23379628636564 39.0 35.0 41.0 30.0 41.0 34 35.92005930557903 39.0 35.0 41.0 29.0 41.0 35 35.71076518096696 39.0 35.0 41.0 27.0 41.0 36 35.57041121795229 39.0 35.0 41.0 26.0 41.0 37 35.50622785800638 39.0 35.0 41.0 26.0 41.0 38 35.40442252136228 39.0 35.0 41.0 25.0 41.0 39 35.33292206104047 39.0 35.0 41.0 24.0 41.0 40 35.186743933233174 38.0 35.0 41.0 23.0 41.0 41 35.040637878178174 38.0 35.0 41.0 23.0 41.0 42 35.03598060556556 38.0 35.0 41.0 23.0 41.0 43 34.920786897173635 38.0 35.0 40.0 23.0 41.0 44 34.785597290064516 38.0 34.0 40.0 23.0 41.0 45 34.771422124104134 38.0 34.0 40.0 23.0 41.0 46 34.625898657130186 38.0 34.0 40.0 23.0 41.0 47 34.478946605244666 37.0 34.0 40.0 23.0 41.0 48 34.39624741203048 37.0 34.0 40.0 22.0 41.0 49 34.375106929366126 37.0 34.0 40.0 22.0 41.0 50 34.27933425369094 37.0 34.0 40.0 22.0 41.0 51 33.25844259362379 35.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 19.0 9 22.0 10 32.0 11 33.0 12 27.0 13 30.0 14 56.0 15 81.0 16 120.0 17 219.0 18 477.0 19 862.0 20 1545.0 21 2481.0 22 3691.0 23 5439.0 24 8474.0 25 13647.0 26 19758.0 27 23415.0 28 23637.0 29 21910.0 30 22577.0 31 26127.0 32 31521.0 33 43742.0 34 80203.0 35 97266.0 36 86291.0 37 120551.0 38 204383.0 39 326664.0 40 187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.0689616118213 20.51250590953668 23.16529799938052 22.253234479261494 2 39.098266907709984 23.639605350200647 21.38184058365201 15.880287158437358 3 28.546472768082754 22.87915201258871 32.556720827052 16.017654392276548 4 25.944732211114818 22.49725222631874 33.738370761114005 17.81964480145244 5 24.21798918737114 27.265122193345455 30.78673415193108 17.730154467352328 6 24.86767356877671 30.06772264688899 30.638127000769632 14.426476783564668 7 72.6247952576129 5.2210702975317655 17.364728453035593 4.789405991819742 8 73.69241580143614 5.5595548306333225 16.40847747168785 4.339551896242693 9 68.20991017504241 5.776373693788616 18.09480827360876 7.918907857560217 10 43.72928444627105 19.725711696978692 23.302751034115293 13.242252822634962 11 32.971911360810786 22.728485639933112 27.44393125975449 16.855671739501616 12 29.629280070425374 20.178654624796973 31.5406666214782 18.651398683299455 13 27.144829337728627 20.700667273565003 34.34987374398214 17.804629644724233 14 23.165898605649645 21.85957997029573 37.191685206810185 17.782836217244437 15 22.34924568142642 19.759688851632234 40.0388163251648 17.85224914177654 16 26.20719715072386 20.729067370005207 36.14319826270347 16.920537216567467 17 26.22392832536386 20.746913956287877 34.53305865606625 18.496099062282013 18 25.827356585948042 24.035404881556154 32.94574208765591 17.191496444839892 19 22.788632067741524 29.571621868589066 29.950690225304573 17.689055838364844 20 22.281720376597292 31.085149666792223 30.24472989449064 16.38840006211985 21 25.07822896655395 27.976583219575645 31.37095245000167 15.574235363868727 22 23.727551268180136 22.464476284203457 34.78565649268247 19.022315954933937 23 20.10134801787061 22.496051013780484 38.41220294657436 18.990398021774553 24 21.110623952692816 21.354041093480934 38.39941861313149 19.135916340694763 25 21.986565295768557 21.137651234803588 36.948525468708844 19.92725800071901 26 18.67070388480715 21.100499447013227 35.775627225996985 24.453169442182638 27 19.45415186243714 22.550706184271153 33.18958823292198 24.805553720369733 28 18.431490987902933 23.890401368009478 34.861075479905864 22.81703216418173 29 19.816489044512647 21.01075171022635 33.79971840146068 25.373040843800325 30 21.942206232748656 20.49002607489217 29.548541427675424 28.01922626468375 31 21.779956739188442 23.90370050682589 29.271833539398486 25.04450921458718 32 22.716730917237314 26.52397405724121 28.489929977889112 22.269365047632366 33 23.73595975594793 23.892031585025684 29.68616606420138 22.685842594825004 34 23.892031585025684 21.589307149188024 31.694507627270614 22.82415363851568 35 24.286715704738526 23.985211357636153 27.285113802017865 24.44295913560746 36 22.176700080395438 26.788240815657634 27.443845458858902 23.591213645088025 37 20.996079757080505 26.07326195270826 28.696538534469223 24.234119755742007 38 21.769403229030903 22.570955195630333 29.79358878547974 25.866052789859022 39 20.80053951603147 21.34134256093365 30.6158187679163 27.242299155118584 40 21.268154396995595 21.22654096263457 31.97104391375637 25.534260726613468 41 19.123732613521017 21.84679563685286 35.75246098418775 23.27701076543837 42 22.089183166893896 21.2806813277517 35.13117669922239 21.498958806132016 43 23.080440913642256 20.00130417361296 34.30997632753291 22.60827858521187 44 21.31800471733324 19.367836161473853 37.024802464888126 22.28935665630478 45 21.39350950545222 19.11489512127528 36.45783014683107 23.03376522644143 46 25.224347891743292 20.386807597497704 32.90841869807437 21.480425812684633 47 26.34670940695279 20.460081562331347 32.013172153490935 21.180036877224925 48 24.006575780638 20.134381362672663 31.34169434460557 24.51734851208377 49 22.12255971527831 18.717465372903565 33.864412276735344 25.295562635082785 50 20.428592633649913 19.071994673480404 36.98481924754331 23.514593445326383 51 20.0236124064663 19.70572008830628 36.184296891690956 24.086370613536463 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 788.0 1 1192.0 2 1596.0 3 19042.5 4 36489.0 5 23431.0 6 10373.0 7 10007.0 8 9641.0 9 9512.5 10 9384.0 11 9344.5 12 9305.0 13 9042.0 14 8779.0 15 8356.5 16 7934.0 17 7294.5 18 6655.0 19 6108.0 20 5561.0 21 5258.0 22 4955.0 23 4981.5 24 5008.0 25 5293.0 26 5883.5 27 6189.0 28 7009.0 29 7829.0 30 9566.0 31 11303.0 32 12638.0 33 13973.0 34 15830.5 35 17688.0 36 19957.0 37 22226.0 38 26936.0 39 31646.0 40 40633.0 41 49620.0 42 58272.0 43 66924.0 44 71006.0 45 75088.0 46 75402.0 47 75716.0 48 89130.0 49 102544.0 50 98586.5 51 94629.0 52 92000.5 53 89372.0 54 80472.5 55 71573.0 56 66750.5 57 61928.0 58 58761.0 59 55594.0 60 51306.5 61 47019.0 62 43278.5 63 39538.0 64 35679.5 65 31821.0 66 27596.5 67 23372.0 68 21286.5 69 19201.0 70 15620.5 71 12040.0 72 9866.5 73 7693.0 74 6030.5 75 3437.5 76 2507.0 77 1775.5 78 1044.0 79 828.0 80 612.0 81 413.5 82 215.0 83 150.0 84 85.0 85 54.5 86 24.0 87 32.0 88 40.0 89 23.0 90 6.0 91 8.5 92 11.0 93 6.5 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1165489.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.073830754327663 #Duplication Level Percentage of deduplicated Percentage of total 1 72.11671073001406 22.409424637832632 2 7.727903391405169 4.80271124140638 3 3.3483457820686056 3.121377904169003 4 2.1752626179232197 2.7037496974224737 5 1.6092173744687472 2.500227417058269 6 1.322638640994999 2.4659669567647526 7 1.1312984426806778 2.460764343834569 8 1.020528568001573 2.53693856016298 9 0.9545681340290533 2.6695879776263847 >10 8.456187758220262 44.608598432368424 >50 0.09886242894731993 2.0317179836819035 >100 0.03117409175859578 1.8589410522451573 >500 0.0028084767260469785 0.63410476794163 >1k 0.003931867416465769 2.7014468884713945 >5k 2.808476726046978E-4 0.5491909310014694 >10k+ 2.808476726046978E-4 1.9452512080125144 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22290 1.9125019626954867 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC 6293 0.5399450359462852 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTT 4583 0.39322550448781585 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC 3673 0.31514668950114505 No Hit CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 3200 0.27456286588719414 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCG 2589 0.222138518681858 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCT 2584 0.22170951420390927 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGC 2467 0.21167080941990873 No Hit CGTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT 2061 0.17683564581047098 No Hit GAACTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT 1774 0.15221078877621325 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCC 1481 0.12707112636841703 No Hit GCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 1473 0.12638471920369904 No Hit CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 1415 0.12140826725949366 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTT 1392 0.11943484666092945 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.14805373538489E-4 0.0 0.0 0.06580928691733684 0.0 2 5.14805373538489E-4 0.0 0.0 0.3691154528270966 0.0 3 6.006062691282371E-4 0.0 0.0 0.8063568167524533 0.0 4 6.006062691282371E-4 0.0 0.0 1.345100640160482 0.0 5 6.006062691282371E-4 0.0 0.0 2.8371782144662028 0.0 6 6.006062691282371E-4 0.0 0.0 4.311666605176025 0.0 7 6.006062691282371E-4 0.0 0.0 5.362212770776901 0.0 8 6.006062691282371E-4 0.0 0.0 6.4870625119584995 0.0 9 6.006062691282371E-4 0.0 0.0 7.333574147846956 0.0 10 6.006062691282371E-4 0.0 0.0 8.835347223354317 0.0 11 6.006062691282371E-4 0.0 0.0 10.240251087740853 0.0 12 6.006062691282371E-4 0.0 0.0 11.208085189993213 0.0 13 6.006062691282371E-4 0.0 0.0 11.663087339305648 0.0 14 6.006062691282371E-4 0.0 0.0 11.916714786668944 0.0 15 6.864071647179853E-4 0.0 0.0 12.15275305043634 0.0 16 6.864071647179853E-4 0.0 0.0 12.396942399284764 0.0 17 6.864071647179853E-4 0.0 0.0 12.637356508727239 0.0 18 6.864071647179853E-4 0.0 0.0 12.941349081801716 0.0 19 6.864071647179853E-4 0.0 0.0 13.170694875713112 0.0 20 6.864071647179853E-4 0.0 0.0 13.381421875281534 0.0 21 6.864071647179853E-4 0.0 0.0 13.623466201740214 0.0 22 6.864071647179853E-4 0.0 0.0 13.912529418982075 0.0 23 6.864071647179853E-4 0.0 0.0 14.233682171174502 0.0 24 6.864071647179853E-4 0.0 0.0 14.489797844509901 0.0 25 6.864071647179853E-4 0.0 0.0 14.690657741085502 0.0 26 6.864071647179853E-4 0.0 0.0 14.900784134384795 0.0 27 6.864071647179853E-4 0.0 0.0 15.13373356591096 0.0 28 7.722080603077334E-4 0.0 0.0 15.349265415632408 0.0 29 7.722080603077334E-4 0.0 0.0 15.585475281190986 0.0 30 7.722080603077334E-4 0.0 0.0 15.89718993486854 0.0 31 7.722080603077334E-4 0.0 0.0 16.14601253207881 0.0 32 7.722080603077334E-4 0.0 0.0 16.39080248719636 0.0 33 7.722080603077334E-4 0.0 0.0 16.65386803307453 0.0 34 7.722080603077334E-4 0.0 0.0 16.924827261346955 0.0 35 7.722080603077334E-4 0.0 0.0 17.193727268125226 0.0 36 8.580089558974817E-4 0.0 0.0 17.48742373372893 0.0 37 8.580089558974817E-4 0.0 0.0 17.77803136709141 0.0 38 8.580089558974817E-4 0.0 0.0 18.12492438796076 0.0 39 8.580089558974817E-4 0.0 0.0 18.61287408117966 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACTA 20 7.0333283E-4 45.0 24 GTTCACG 25 3.8908394E-5 45.0 1 TATAGCG 40 6.8157533E-9 45.0 1 CGTTTTT 10830 0.0 44.085873 1 CGAATAT 125 0.0 41.399998 14 ACTACGG 60 3.6379788E-12 41.250004 2 CGTTATT 285 0.0 41.05263 1 CTACGAA 130 0.0 39.807693 11 CGTTCTG 435 0.0 39.310345 1 GTTTTTT 12405 0.0 39.068924 2 TCGTTGA 70 0.0 38.57143 24 TAATCGT 70 0.0 38.57143 21 CTCGATC 170 0.0 38.382355 16 TCGATCA 165 0.0 38.181816 17 ACGATAG 30 1.13993156E-4 37.500004 1 TATTACG 30 1.13993156E-4 37.500004 1 ACGTATG 30 1.13993156E-4 37.500004 1 ATACGAG 30 1.13993156E-4 37.500004 1 CGTTTCT 615 0.0 37.317074 1 TCCACCG 110 0.0 36.81818 38 >>END_MODULE