SRR2935764.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935764.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	754967
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGC	22239	2.945691665993348	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCG	18861	2.4982548906111126	No Hit
GAATCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC	17668	2.3402347387369247	No Hit
GCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	7119	0.94295512254178	No Hit
GAATGACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCT	3996	0.5292946579122001	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACGAGTCTT	3652	0.483729752426265	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTA	3193	0.4229323930714852	No Hit
GAACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT	3174	0.42041572678011097	No Hit
CCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	3123	0.41366046462957984	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTC	3052	0.40425608006707575	No Hit
CTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGCT	2236	0.29617188565857844	No Hit
GAATGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT	1614	0.213784178646219	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1355	0.17947804341116896	No Hit
TCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	1271	0.1683517292808825	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATG	1047	0.13868155826678516	No Hit
ACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	974	0.1290122614630838	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACGAGTCTTCGT	841	0.11139559742346355	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTAT	830	0.10993858009687842	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGGTA	90	0.0	45.000004	14
TGATCCG	20	7.031748E-4	45.0	4
GTTTGCG	20	7.031748E-4	45.0	1
TCCGCAT	20	7.031748E-4	45.0	39
CTCGTCG	20	7.031748E-4	45.0	30
ATTAGCG	20	7.031748E-4	45.0	1
TTGCTCG	35	1.2111923E-7	45.0	1
CGCATCG	20	7.031748E-4	45.0	21
CGCGCCA	20	7.031748E-4	45.0	20
GTTAGTC	20	7.031748E-4	45.0	20
TTATCCG	25	3.889529E-5	45.0	1
TACGCGG	25	3.889529E-5	45.0	2
CGCTCGT	20	7.031748E-4	45.0	24
CTACGAA	40	6.8102963E-9	45.0	11
CGAATAT	40	6.8102963E-9	45.0	14
GTTCACG	20	7.031748E-4	45.0	1
CCGAACG	20	7.031748E-4	45.0	1
GACGCGA	20	7.031748E-4	45.0	1
ATACGTT	20	7.031748E-4	45.0	37
TCGAATA	40	6.8102963E-9	45.0	29