SRR2935762.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935762.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1140977
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3396	0.2976396544365048	No Hit
GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC	2868	0.25136352441810833	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGC	2636	0.23103007334941897	No Hit
CCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC	2534	0.2220903664140469	No Hit
GAATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTC	2506	0.21963632921610166	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCG	2392	0.20964489205303874	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1851	0.1622293876213105	No Hit
CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT	1788	0.15670780392593364	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATTCGT	35	1.2119199E-7	45.000004	11
CGAACCT	25	3.8907885E-5	45.0	41
ACACGAT	20	7.033266E-4	45.0	32
TTGTACG	20	7.033266E-4	45.0	1
ACTACCG	20	7.033266E-4	45.0	1
TATTACG	20	7.033266E-4	45.0	1
ACGACTA	20	7.033266E-4	45.0	19
ATACGGA	130	0.0	41.53846	4
GCTAACG	55	6.184564E-11	40.909092	1
CGGTCTA	125	0.0	39.6	31
CGCATCG	40	3.45819E-7	39.375	21
TAGGACG	40	3.45819E-7	39.375	1
CGTTTTT	1655	0.0	39.018127	1
ACGGGAC	255	0.0	38.82353	5
TACGGAA	140	0.0	38.57143	5
ACGATAT	35	6.2482486E-6	38.57143	34
CCATACG	140	0.0	38.57143	2
CGACGGT	130	0.0	38.07692	28
AATCGTT	30	1.13991686E-4	37.499996	22
TAGCCGT	115	0.0	37.173916	44