##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935760.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1436731 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13579299117232 33.0 31.0 34.0 30.0 34.0 2 32.18783892043813 33.0 31.0 34.0 30.0 34.0 3 32.19465717660439 34.0 31.0 34.0 30.0 34.0 4 35.85403043436802 37.0 35.0 37.0 35.0 37.0 5 34.90532396113121 37.0 35.0 37.0 33.0 37.0 6 35.38800165097015 37.0 35.0 37.0 33.0 37.0 7 35.9448498013894 37.0 35.0 37.0 35.0 37.0 8 35.93139773555384 37.0 35.0 37.0 35.0 37.0 9 37.807993980779976 39.0 38.0 39.0 35.0 39.0 10 37.41425082357101 39.0 37.0 39.0 34.0 39.0 11 37.36005278649935 39.0 37.0 39.0 35.0 39.0 12 37.244988797485405 39.0 37.0 39.0 34.0 39.0 13 37.16470445754981 39.0 37.0 39.0 34.0 39.0 14 38.18615175700949 40.0 38.0 41.0 33.0 41.0 15 38.31834490938109 40.0 38.0 41.0 33.0 41.0 16 38.386474573180365 40.0 38.0 41.0 34.0 41.0 17 38.36860135961429 40.0 37.0 41.0 34.0 41.0 18 38.330370124957284 40.0 37.0 41.0 34.0 41.0 19 38.224479739074326 40.0 37.0 41.0 34.0 41.0 20 38.176562627241985 40.0 37.0 41.0 34.0 41.0 21 38.12306827095678 40.0 37.0 41.0 34.0 41.0 22 38.17874884024915 40.0 37.0 41.0 34.0 41.0 23 38.180314895411875 40.0 37.0 41.0 34.0 41.0 24 38.14418565479551 40.0 36.0 41.0 34.0 41.0 25 38.009676132832105 40.0 36.0 41.0 34.0 41.0 26 38.020353844943834 40.0 36.0 41.0 34.0 41.0 27 38.03111856012016 40.0 36.0 41.0 34.0 41.0 28 37.92491426718015 40.0 36.0 41.0 34.0 41.0 29 37.873738368560296 40.0 36.0 41.0 34.0 41.0 30 37.7475686123568 40.0 36.0 41.0 33.0 41.0 31 37.682067833157355 40.0 36.0 41.0 33.0 41.0 32 37.58088118095872 40.0 36.0 41.0 33.0 41.0 33 37.42250915446245 40.0 36.0 41.0 33.0 41.0 34 37.280584187297414 40.0 35.0 41.0 33.0 41.0 35 37.192900410724064 40.0 35.0 41.0 32.0 41.0 36 37.11674349617291 40.0 35.0 41.0 32.0 41.0 37 37.06429735280996 40.0 35.0 41.0 32.0 41.0 38 36.94359834930825 40.0 35.0 41.0 32.0 41.0 39 36.86473807553397 39.0 35.0 41.0 31.0 41.0 40 36.72438125160521 39.0 35.0 41.0 31.0 41.0 41 36.63101304280342 39.0 35.0 41.0 31.0 41.0 42 36.65411548856397 39.0 35.0 41.0 31.0 41.0 43 36.57488005757515 39.0 35.0 41.0 31.0 41.0 44 36.47383609040245 39.0 35.0 41.0 31.0 41.0 45 36.44637374706887 39.0 35.0 41.0 31.0 41.0 46 36.33591535228237 39.0 35.0 41.0 30.0 41.0 47 36.22522657338082 39.0 35.0 41.0 30.0 41.0 48 36.15352978393311 39.0 35.0 41.0 30.0 41.0 49 36.14468261630048 39.0 35.0 41.0 30.0 41.0 50 36.012094122003354 38.0 35.0 40.0 30.0 41.0 51 34.829849846631 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 26.0 10 18.0 11 32.0 12 27.0 13 33.0 14 25.0 15 50.0 16 102.0 17 209.0 18 341.0 19 689.0 20 1264.0 21 2085.0 22 3066.0 23 4487.0 24 6316.0 25 9415.0 26 12171.0 27 13945.0 28 15553.0 29 16866.0 30 19944.0 31 25734.0 32 34277.0 33 50111.0 34 90001.0 35 104001.0 36 102308.0 37 153521.0 38 273222.0 39 496498.0 40 384.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.35014696557671 20.402497057556353 23.718427457888776 12.528928518978152 2 33.308670864622535 25.507697683143192 24.41695766291672 16.766673789317554 3 30.91225845339176 25.061685172798526 27.77771204212897 16.248344331680737 4 27.407983818822036 24.048064669029902 29.641665698032547 18.902285814115515 5 25.162887137536533 30.098744998193816 26.23720097916729 18.50116688510236 6 24.865754271328452 34.758698740404434 25.987884997261148 14.38766199100597 7 78.23510455332278 5.553022799675096 11.627785577119168 4.5840870698829495 8 79.76614968285642 6.259487684194188 9.346147608703369 4.628215024246014 9 74.23024908629382 6.40091986600136 11.204045851311067 8.164785196393758 10 40.40512803022974 22.954401345833006 20.53745621135759 16.103014412579668 11 31.611902297646534 24.841184605886557 24.127202656586373 19.419710439880532 12 26.85756763096223 21.6604221667104 29.844000025056882 21.638010177270484 13 25.923293922105113 21.797956611223672 32.47170138320952 19.80704808346169 14 21.45342447542372 25.31086194980132 31.49921592838186 21.736497646393097 15 19.73090300132732 25.09961850896236 34.2871421302944 20.882336359415923 16 23.754690335212366 25.07247355280842 29.020533419269164 22.152302692710048 17 24.558737856982273 25.246827694258698 28.333696426122913 21.86073802263611 18 24.93382546906832 24.85531390357694 29.308061147145846 20.90279948020889 19 24.204948595109315 26.566629382953383 27.639690380453963 21.58873164148334 20 24.004841546538636 27.311584423249723 28.6963948018105 19.987179228401143 21 24.08822528364739 26.891255217573786 30.162083229219665 18.85843626955916 22 22.6196135532678 23.613884575470287 30.380704529936363 23.38579734132555 23 21.677126755112823 26.103285862141206 30.368802510699638 21.850784872046333 24 22.916259202314144 25.448814009024655 28.962067359860683 22.67285942880052 25 23.231488705958178 27.508280951688242 27.197157992693132 22.063072349660445 26 21.279835960941888 25.208337538481455 28.805531446039655 24.706295054537 27 21.658821310321834 25.29819430359615 30.103895579617895 22.93908880646412 28 19.81546998011458 25.63339971087142 30.511974753798725 24.039155555215277 29 21.289371496821605 25.208407140933133 30.636563142300123 22.86565821994514 30 22.721024325360837 25.03969079806867 31.188301776741785 21.050983099828706 31 23.54748383657066 24.976213362139468 29.300683287268107 22.175619514021765 32 24.21016877898507 25.63395653048483 29.16370566236825 20.992169028161847 33 23.409531777347325 25.3735041563104 28.01777089796211 23.199193168380162 34 22.005511122123767 25.079224990621068 30.254724092401432 22.660539794853733 35 21.227286109925934 26.576930545801545 29.721778119912496 22.47400522436002 36 24.25638480689844 26.725253370324715 27.948934073253795 21.069427749523047 37 22.098639202467268 26.35830924508485 29.78741323184368 21.755638320604202 38 23.216036961685937 27.411603146309226 27.283673840127342 22.08868605187749 39 22.650377836908927 24.797404663781876 28.564915770593103 23.987301728716094 40 22.792993260394603 25.603749066457116 29.32608818213013 22.27716949101815 41 21.845703893073928 25.108527622776982 27.632660532834606 25.41310795131448 42 21.785636977276887 25.31315883070665 30.023087133221182 22.87811705879528 43 23.282507303037242 23.674856323139124 29.61069260703639 23.431943766787242 44 22.789513137810765 23.85916361517918 29.088256604750644 24.263066642259407 45 21.559637816682457 23.806335354356523 28.82689939870442 25.807127430256603 46 23.097643191383774 24.888514273026754 28.14034081536488 23.873501720224592 47 20.64325193790626 25.03843795393849 31.571393670770657 22.74691643738459 48 21.412289426482758 25.698547605640858 29.235604994950343 23.653557972926038 49 22.649821017295512 23.572262309367588 30.7564185640875 23.0214981092494 50 21.544951699378657 23.985492064972497 29.886179110772996 24.583377124875845 51 20.72447799901304 24.018762036873987 28.45731038030084 26.79944958381214 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 597.0 1 1142.5 2 1688.0 3 7206.0 4 12724.0 5 8268.5 6 3813.0 7 3783.5 8 3754.0 9 3768.5 10 3783.0 11 3836.0 12 3889.0 13 3841.5 14 3794.0 15 3602.0 16 3410.0 17 3516.5 18 3623.0 19 3740.5 20 3858.0 21 4008.0 22 4158.0 23 4730.0 24 5302.0 25 6695.5 26 8964.0 27 9839.0 28 12722.0 29 15605.0 30 18042.5 31 20480.0 32 23428.0 33 26376.0 34 30933.0 35 35490.0 36 38532.0 37 41574.0 38 47014.5 39 52455.0 40 57818.0 41 63181.0 42 72737.0 43 82293.0 44 108738.0 45 135183.0 46 135291.5 47 135400.0 48 137699.0 49 139998.0 50 124718.0 51 109438.0 52 100880.5 53 92323.0 54 86435.5 55 80548.0 56 77318.0 57 74088.0 58 68803.5 59 63519.0 60 58006.0 61 52493.0 62 47840.0 63 43187.0 64 37361.5 65 31536.0 66 27868.0 67 24200.0 68 20804.5 69 17409.0 70 14364.5 71 11320.0 72 9289.0 73 7258.0 74 5895.5 75 3451.0 76 2369.0 77 1687.5 78 1006.0 79 818.0 80 630.0 81 493.5 82 357.0 83 210.0 84 63.0 85 44.0 86 25.0 87 24.5 88 24.0 89 27.5 90 31.0 91 18.5 92 6.0 93 7.0 94 8.0 95 5.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1436731.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.233238259772175 #Duplication Level Percentage of deduplicated Percentage of total 1 72.57644879967184 20.490681710092915 2 10.147693847489306 5.730045163667796 3 3.8744685781746404 3.2816638349281613 4 2.050852121521232 2.3160878632987276 5 1.2583506521315193 1.7763656887984443 6 0.9239489984503776 1.565164332787643 7 0.7187999856660461 1.4205835879501214 8 0.5755826429724412 1.3000449517784254 9 0.49361367032183073 1.2542681126229194 >10 6.876069756485478 46.580305674652564 >50 0.4491681410930182 7.582854271936909 >100 0.04743361262085118 2.381005836318135 >500 0.003027677360591803 0.5717975675353546 >1k 0.00353229025402377 1.6265635551391913 >5k 0.0010092257868639341 2.1225678484927073 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC 7906 0.5502769829564477 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7765 0.5404630372700248 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC 7339 0.510812392855726 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG 6787 0.4723918395301556 No Hit GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 3847 0.2677606316004875 No Hit CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 2337 0.16266092956858313 No Hit CTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGCT 1938 0.13488955134955674 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTG 1906 0.1326622728959005 No Hit GAACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT 1817 0.12646765469666904 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTT 1463 0.10182838680309675 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4801225838378933E-4 0.0 0.0 0.14226741122729308 0.0 2 3.4801225838378933E-4 0.0 0.0 0.7150955885270103 0.0 3 3.4801225838378933E-4 0.0 0.0 1.073896226920697 0.0 4 3.4801225838378933E-4 0.0 0.0 1.5803236653207873 0.0 5 3.4801225838378933E-4 0.0 0.0 3.0927153378050587 0.0 6 3.4801225838378933E-4 0.0 0.0 3.989751735015114 0.0 7 3.4801225838378933E-4 0.0 0.0 4.74507754061129 0.0 8 3.4801225838378933E-4 0.0 0.0 5.7787435504628215 0.0 9 3.4801225838378933E-4 0.0 0.0 6.203736120401105 0.0 10 3.4801225838378933E-4 0.0 0.0 7.524025026257525 0.0 11 3.4801225838378933E-4 0.0 0.0 8.623534955395268 0.0 12 3.4801225838378933E-4 0.0 0.0 10.012869493315032 0.0 13 3.4801225838378933E-4 0.0 0.0 10.404592091351827 0.0 14 3.4801225838378933E-4 0.0 0.0 10.589873817715356 0.0 15 4.1761471006054716E-4 0.0 0.0 10.911437144461976 0.0 16 4.1761471006054716E-4 0.0 0.0 11.432689905069216 0.0 17 4.1761471006054716E-4 0.0 0.0 12.037047992978504 0.0 18 4.8721716173730505E-4 0.0 0.0 12.710730122757845 0.0 19 4.8721716173730505E-4 0.0 0.0 13.22885077303963 0.0 20 4.8721716173730505E-4 0.0 0.0 13.704374722895238 0.0 21 4.8721716173730505E-4 0.0 0.0 14.257435803918757 0.0 22 4.8721716173730505E-4 0.0 0.0 14.883231446944487 0.0 23 4.8721716173730505E-4 0.0 0.0 15.45612922669588 0.0 24 4.8721716173730505E-4 0.0 0.0 15.926154582869026 0.0 25 4.8721716173730505E-4 0.0 0.0 16.35929063965349 0.0 26 5.568196134140629E-4 0.0 0.0 16.761662412796827 0.0 27 5.568196134140629E-4 0.0 0.0 17.244703427433528 0.0 28 6.264220650908207E-4 0.0 0.0 17.686400585774233 0.0 29 6.264220650908207E-4 0.0 0.0 18.18155242700269 0.0 30 6.264220650908207E-4 0.0 0.0 18.780899138391252 0.0 31 6.960245167675787E-4 0.0 0.0 19.26052963289579 0.0 32 6.960245167675787E-4 0.0 0.0 19.71566006441011 0.0 33 6.960245167675787E-4 0.0 0.0 20.180465236707498 0.0 34 6.960245167675787E-4 0.0 0.0 20.648959338943754 0.0 35 6.960245167675787E-4 0.0 0.0 21.128589833448295 0.0 36 6.960245167675787E-4 0.0 0.0 21.567154881463544 0.0 37 6.960245167675787E-4 0.0 0.0 22.042052409254065 0.0 38 6.960245167675787E-4 0.0 0.0 22.586413183817985 0.0 39 6.960245167675787E-4 0.0 0.0 23.406747679280254 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCACGA 30 2.1658816E-6 45.000004 39 ACGTTAG 35 1.2122109E-7 45.0 1 ACCGCGT 20 7.033877E-4 45.0 21 TAGCGAT 25 3.891295E-5 45.0 1 CGTTTTT 3845 0.0 42.834854 1 CGCGTAG 45 1.9288564E-8 40.0 2 CACAACG 410 0.0 39.512196 12 CGTAAGG 305 0.0 38.360657 2 CGCATCG 85 0.0 37.058823 21 AGTACGG 165 0.0 36.818184 2 ACAACGA 435 0.0 36.72414 13 AGCGACT 430 0.0 36.104652 19 GCGCGTA 25 0.0021072836 36.0 1 CGTACGA 25 0.0021072836 36.0 27 TTAACGA 25 0.0021072836 36.0 15 TAATGCG 50 4.8803486E-8 36.0 1 TGTACGG 245 0.0 35.816326 2 CGAGATA 715 0.0 35.55944 19 CAACGAG 460 0.0 35.21739 14 TGGGCGA 495 0.0 35.0 6 >>END_MODULE