##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935756.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 809177 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94093257717409 33.0 31.0 34.0 30.0 34.0 2 31.976738093148963 33.0 31.0 34.0 30.0 34.0 3 32.025553123729416 33.0 31.0 34.0 30.0 34.0 4 35.71863016373426 37.0 35.0 37.0 33.0 37.0 5 34.76123023763651 37.0 35.0 37.0 33.0 37.0 6 35.22785620451397 37.0 35.0 37.0 33.0 37.0 7 35.777350320140094 37.0 35.0 37.0 35.0 37.0 8 35.737949793432094 37.0 35.0 37.0 35.0 37.0 9 37.55988615593375 39.0 37.0 39.0 35.0 39.0 10 37.27630543132096 39.0 37.0 39.0 34.0 39.0 11 37.2001675776746 39.0 37.0 39.0 34.0 39.0 12 37.03354148721479 39.0 37.0 39.0 33.0 39.0 13 36.88488674294994 39.0 35.0 39.0 33.0 39.0 14 37.878842329922875 40.0 37.0 41.0 33.0 41.0 15 37.95995560921776 40.0 37.0 41.0 33.0 41.0 16 38.06818903651488 40.0 37.0 41.0 33.0 41.0 17 38.01494728594609 40.0 36.0 41.0 33.0 41.0 18 38.00400901162539 40.0 36.0 41.0 33.0 41.0 19 37.943744075770816 40.0 36.0 41.0 33.0 41.0 20 37.878581571151926 40.0 36.0 41.0 33.0 41.0 21 37.828756872723766 40.0 36.0 41.0 33.0 41.0 22 37.8785098933855 40.0 36.0 41.0 33.0 41.0 23 37.874780177884446 40.0 36.0 41.0 33.0 41.0 24 37.82265561181299 40.0 36.0 41.0 33.0 41.0 25 37.6836563570146 40.0 35.0 41.0 33.0 41.0 26 37.675402291464046 40.0 35.0 41.0 33.0 41.0 27 37.66359152571069 40.0 36.0 41.0 33.0 41.0 28 37.530628033174445 40.0 35.0 41.0 33.0 41.0 29 37.489042570414135 40.0 35.0 41.0 33.0 41.0 30 37.39859758742525 39.0 35.0 41.0 33.0 41.0 31 37.342365143843686 39.0 35.0 41.0 33.0 41.0 32 37.25225630486284 39.0 35.0 41.0 32.0 41.0 33 37.13506315676298 39.0 35.0 41.0 32.0 41.0 34 37.02920745399338 39.0 35.0 41.0 32.0 41.0 35 36.95207723402914 39.0 35.0 41.0 31.0 41.0 36 36.911018232104965 39.0 35.0 41.0 32.0 41.0 37 36.85443852210332 39.0 35.0 41.0 31.0 41.0 38 36.7763975001761 39.0 35.0 41.0 31.0 41.0 39 36.69548813176845 39.0 35.0 41.0 31.0 41.0 40 36.57987807364767 39.0 35.0 41.0 31.0 41.0 41 36.473734423988816 39.0 35.0 41.0 31.0 41.0 42 36.5011091516442 39.0 35.0 41.0 31.0 41.0 43 36.41185179509551 39.0 35.0 41.0 31.0 41.0 44 36.30506428136242 38.0 35.0 40.0 30.0 41.0 45 36.26650658632166 38.0 35.0 40.0 30.0 41.0 46 36.14946544451956 38.0 35.0 40.0 30.0 41.0 47 36.01168100427966 38.0 35.0 40.0 30.0 41.0 48 35.976183208370976 38.0 35.0 40.0 30.0 41.0 49 35.98660243679689 38.0 35.0 40.0 30.0 41.0 50 35.86244542294207 38.0 35.0 40.0 30.0 41.0 51 34.710272289004756 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 10.0 10 11.0 11 14.0 12 14.0 13 15.0 14 27.0 15 32.0 16 45.0 17 100.0 18 204.0 19 446.0 20 790.0 21 1423.0 22 2247.0 23 3046.0 24 3926.0 25 4949.0 26 6093.0 27 7268.0 28 8301.0 29 9952.0 30 12695.0 31 16467.0 32 22353.0 33 31563.0 34 57369.0 35 70924.0 36 64086.0 37 92478.0 38 151390.0 39 240794.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.08309059698929 17.59429642711051 21.106877728852897 16.21573524704731 2 28.648861744710985 28.849188743624694 25.000957763258224 17.500991748406097 3 29.74528440625475 28.632301709020403 25.632340019550732 15.99007386517412 4 27.69703043957008 24.42864787308586 29.209678475784656 18.664643211559397 5 27.18663530970356 29.83203922009647 23.91133213128895 19.06999333891102 6 24.77282473426704 35.70590859601793 24.45225210306274 15.069014566652289 7 75.65155707589317 6.143031747071407 13.181911992061067 5.023499184974363 8 75.55924105603596 8.225518026340344 9.855940047727506 6.359300869896203 9 69.40310957923916 7.11686071156249 12.069052877182619 11.41097683201574 10 42.369716390851444 22.085155658156374 18.718525118731748 16.82660283226043 11 32.46026518301929 22.287089227696782 25.17261365560316 20.080031933680765 12 28.317043119119795 18.96037578922782 30.015929765675498 22.706651325976885 13 26.04399284705324 20.947580072097946 33.457821959843145 19.550605121005663 14 21.046569539173753 27.202948180682345 29.929174951833776 21.821307328310123 15 18.297850779248545 23.268951045321355 37.39911045420223 21.034087721227866 16 21.97195422015208 22.799708839969497 30.217863335215906 25.010473604662515 17 22.41882801908606 23.33951657054019 28.586452654981542 25.65520275539221 18 23.423428990196214 23.084195423251032 30.124311491799695 23.368064094753063 19 23.92183663154044 25.135786113544995 26.709113086506413 24.233264168408148 20 24.460655703263935 25.74665369875812 28.05714942466234 21.735541173315603 21 24.11474868910016 27.786380482885697 28.14612872091026 19.952742107103884 22 21.703162596069834 22.77041982162123 29.158391798086203 26.368025784222738 23 21.70897096679713 26.161396085158128 27.876348437980813 24.25328451006393 24 23.164894701653655 23.865977406673693 27.446776168872816 25.52235172279983 25 22.499403715132782 27.142516408647303 25.42620464990972 24.93187522631019 26 20.65580212981832 23.97794302111899 27.65649542683492 27.70975942222777 27 22.933424949053176 24.757624104491356 27.605826660915966 24.703124285539506 28 20.82585145153656 24.076190994059395 29.236990176438532 25.860967377965515 29 22.115309752995945 23.696669579090855 26.56254441240915 27.62547625550405 30 22.888935300929216 23.95557461470111 28.724988475945313 24.43050160842436 31 26.142611567061348 23.018820356979994 25.00169925739362 25.836868818565033 32 25.967001039327613 25.719959909883745 24.864152095277053 23.44888695551159 33 24.05209243465892 22.162023883526103 25.912254055663965 27.873629626151015 34 22.937626749153768 21.64483172408509 26.736795534227987 28.68074599253315 35 20.493414914165875 23.536383263488705 29.456225275804922 26.513976546540498 36 23.842002429629115 23.026235298333987 28.13216391469357 24.999598357343324 37 21.242323990919168 24.944974956035576 30.563646767023776 23.249054286021476 38 23.282050775046745 24.908518161045112 26.21354783934788 25.59588322456026 39 22.18562811350298 23.89477209559837 27.375963478942182 26.54363631195647 40 22.207996519920858 20.942142448438354 30.21267287626811 26.637188155372684 41 19.753403767037373 21.839721099339204 29.656057945295032 28.750817188328387 42 21.341437040350876 21.7383835675013 32.1364794105616 24.78369998158623 43 22.85297283536235 21.12492075281428 30.483936147468356 25.53817026435502 44 23.005967791966405 21.77236871537377 28.539738524451387 26.68192496820844 45 21.28236467423073 21.67325566594206 27.91984942725757 29.124530232569633 46 24.767139945895643 22.604943047071284 27.467661587019897 25.160255420013172 47 20.59153930475038 21.691298689903444 32.584094703630974 25.1330673017152 48 21.43115783073419 22.74669200928845 29.13145084450003 26.690699315477328 49 22.170674648439093 19.932721765448104 32.71546274795255 25.181140838160253 50 21.841451252321804 20.172224371182075 31.20812875304167 26.778195623454447 51 20.757016079300325 20.97785774929342 27.895009373721695 30.37011679768456 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 225.0 1 625.5 2 1026.0 3 1869.0 4 2712.0 5 1927.5 6 1143.0 7 1163.0 8 1183.0 9 1248.0 10 1313.0 11 1302.5 12 1292.0 13 1354.5 14 1417.0 15 1414.0 16 1411.0 17 1467.5 18 1524.0 19 1509.0 20 1494.0 21 1786.5 22 2079.0 23 2023.5 24 1968.0 25 2422.5 26 3560.0 27 4243.0 28 5194.5 29 6146.0 30 6851.5 31 7557.0 32 9078.5 33 10600.0 34 12326.0 35 14052.0 36 15744.0 37 17436.0 38 19394.5 39 21353.0 40 25631.5 41 29910.0 42 32669.5 43 35429.0 44 43778.5 45 52128.0 46 75527.5 47 98927.0 48 91663.5 49 84400.0 50 83398.0 51 82396.0 52 71320.0 53 60244.0 54 54177.0 55 48110.0 56 45031.0 57 41952.0 58 40036.0 59 38120.0 60 35452.5 61 32785.0 62 30429.5 63 28074.0 64 24611.0 65 21148.0 66 18951.0 67 16754.0 68 14700.5 69 12647.0 70 10973.5 71 9300.0 72 7592.0 73 5884.0 74 5023.0 75 3148.0 76 2134.0 77 1513.5 78 893.0 79 648.0 80 403.0 81 304.5 82 206.0 83 139.5 84 73.0 85 49.0 86 25.0 87 19.5 88 14.0 89 8.5 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 809177.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.20703154549053 #Duplication Level Percentage of deduplicated Percentage of total 1 73.16575054913025 22.101201348870685 2 10.709639225623395 6.4701281985845736 3 3.943990584914174 3.5740874404086034 4 1.9114280488884607 2.309542694788366 5 1.168482348876842 1.7648191586435817 6 0.8269635187761072 1.498806785918383 7 0.6318307818034413 1.3360012650143946 8 0.5048876065937871 1.220092468744459 9 0.43041542749259293 1.1701415156341093 >10 6.411625058674984 45.471542417154346 >50 0.23730785653668268 4.3734499066198325 >100 0.05026312220062777 2.85676803476613 >500 0.002471956829539071 0.49357185911054113 >1k 0.003707935244308606 2.13968254505485 >5k 0.0012359784147695355 3.2201643606871535 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 9315 1.1511696452074145 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGC 8964 1.1077922382865555 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCG 7596 0.9387315754155148 No Hit GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 4143 0.5120017004932172 TruSeq Adapter, Index 13 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 2650 0.3274932431346912 TruSeq Adapter, Index 13 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 1996 0.2466703823761674 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCT 1719 0.2124380697918997 No Hit CTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCT 1537 0.18994608101812088 TruSeq Adapter, Index 16 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1361 0.16819558637974139 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTC 1348 0.16658901575304289 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTA 1232 0.15225346246865643 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGACCTTT 1207 0.14916390357115933 No Hit TCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 852 0.1052921672267007 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.943294235995339E-4 0.0 0.0 0.20094491069321052 0.0 2 4.943294235995339E-4 0.0 0.0 1.2827848542407903 0.0 3 4.943294235995339E-4 0.0 0.0 1.7025941172326944 0.0 4 4.943294235995339E-4 0.0 0.0 2.4470542291735926 0.0 5 4.943294235995339E-4 0.0 0.0 4.90918550576697 0.0 6 4.943294235995339E-4 0.0 0.0 6.3626375935055 0.0 7 4.943294235995339E-4 0.0 0.0 7.605011017367029 0.0 8 4.943294235995339E-4 0.0 0.0 9.470733844387569 0.0 9 4.943294235995339E-4 0.0 0.0 10.236326539187347 0.0 10 4.943294235995339E-4 0.0 0.0 12.499490222781914 0.0 11 4.943294235995339E-4 0.0 0.0 14.052796854087548 0.0 12 6.179117794994173E-4 0.0 0.0 16.52246665439082 0.0 13 6.179117794994173E-4 0.0 0.0 17.16657789334101 0.0 14 6.179117794994173E-4 0.0 0.0 17.441177888150552 0.0 15 6.179117794994173E-4 0.0 0.0 17.967267977216355 0.0 16 6.179117794994173E-4 0.0 0.0 18.69615671231387 0.0 17 6.179117794994173E-4 0.0 2.4716471179976694E-4 19.484241395887427 0.0 18 7.414941353993008E-4 0.0 2.4716471179976694E-4 20.430140747945135 0.0 19 7.414941353993008E-4 0.0 2.4716471179976694E-4 21.127515982288177 0.0 20 7.414941353993008E-4 0.0 2.4716471179976694E-4 21.723800849505114 0.0 21 7.414941353993008E-4 0.0 2.4716471179976694E-4 22.33429768765054 0.0 22 7.414941353993008E-4 0.0 2.4716471179976694E-4 23.02079767467439 0.0 23 7.414941353993008E-4 0.0 2.4716471179976694E-4 23.627092712719218 0.0 24 8.650764912991843E-4 0.0 2.4716471179976694E-4 24.12537677170755 0.0 25 8.650764912991843E-4 0.0 2.4716471179976694E-4 24.569655341167632 0.0 26 8.650764912991843E-4 0.0 2.4716471179976694E-4 24.997868204360728 0.0 27 8.650764912991843E-4 0.0 2.4716471179976694E-4 25.50196063407635 0.0 28 8.650764912991843E-4 0.0 2.4716471179976694E-4 25.920163326441557 0.0 29 8.650764912991843E-4 0.0 2.4716471179976694E-4 26.390641355352415 0.0 30 8.650764912991843E-4 0.0 2.4716471179976694E-4 27.00014953465064 0.0 31 0.0011122412030989512 0.0 2.4716471179976694E-4 27.443563027619422 0.0 32 0.0011122412030989512 0.0 2.4716471179976694E-4 27.86955140840632 0.0 33 0.0011122412030989512 0.0 2.4716471179976694E-4 28.299618006937912 0.0 34 0.0011122412030989512 0.0 2.4716471179976694E-4 28.740930599856398 0.0 35 0.0011122412030989512 0.0 2.4716471179976694E-4 29.233653452829234 0.0 36 0.0011122412030989512 0.0 2.4716471179976694E-4 29.657170186498135 0.0 37 0.0011122412030989512 0.0 2.4716471179976694E-4 30.105650556058812 0.0 38 0.0011122412030989512 0.0 2.4716471179976694E-4 30.57229753193677 0.0 39 0.0011122412030989512 0.0 2.4716471179976694E-4 31.174020022813302 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACGA 20 7.0320466E-4 45.000004 43 ACGATTG 20 7.0320466E-4 45.000004 1 ATACCGG 20 7.0320466E-4 45.000004 2 GTTTACG 25 3.8897786E-5 45.0 1 TCGAATA 25 3.8897786E-5 45.0 25 GTACGAG 45 3.8380676E-10 45.0 1 CTCACGA 60 3.6379788E-12 41.249996 24 TGGCGTA 55 6.002665E-11 40.909092 13 CGTAAGG 110 0.0 40.909092 2 ATAACGG 55 6.002665E-11 40.909092 2 ACAAGCG 105 0.0 40.714287 14 ACATACG 90 0.0 40.0 17 CGTTGTC 40 3.4565346E-7 39.375004 24 ACGTCAT 40 3.4565346E-7 39.375004 35 TAACGGG 150 0.0 39.0 3 GCGATTA 75 0.0 39.0 9 TACGCGC 35 6.2459985E-6 38.571426 34 TCATCGG 35 6.2459985E-6 38.571426 44 TCACGAC 65 9.094947E-12 38.076927 25 GCGTTAG 65 9.094947E-12 38.076927 1 >>END_MODULE