##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935753.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 333706 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.793419956488645 31.0 31.0 34.0 30.0 34.0 2 31.83761155028678 33.0 31.0 34.0 30.0 34.0 3 31.919153386513877 33.0 31.0 34.0 30.0 34.0 4 35.60157443977633 37.0 35.0 37.0 33.0 37.0 5 34.622527014797456 37.0 35.0 37.0 32.0 37.0 6 35.06000791115533 37.0 35.0 37.0 32.0 37.0 7 35.54456018171684 37.0 35.0 37.0 33.0 37.0 8 35.3696996757625 37.0 35.0 37.0 33.0 37.0 9 37.2540859319281 39.0 37.0 39.0 34.0 39.0 10 37.05374191653731 39.0 37.0 39.0 33.0 39.0 11 36.95767232234362 39.0 37.0 39.0 33.0 39.0 12 36.77371998106118 39.0 35.0 39.0 33.0 39.0 13 36.45562860721713 39.0 35.0 39.0 32.0 39.0 14 37.571500062929644 40.0 36.0 41.0 32.0 41.0 15 37.46734251107262 40.0 36.0 41.0 32.0 41.0 16 37.82223274379244 40.0 36.0 41.0 33.0 41.0 17 37.55457498516658 39.0 36.0 41.0 32.0 41.0 18 37.64012334210353 39.0 36.0 41.0 33.0 41.0 19 37.54444930567625 39.0 36.0 41.0 32.0 41.0 20 37.19712861021378 39.0 35.0 41.0 32.0 41.0 21 37.5264334474058 39.0 35.0 41.0 33.0 41.0 22 37.55192894344123 39.0 35.0 41.0 33.0 41.0 23 37.41823641169173 39.0 35.0 41.0 33.0 41.0 24 37.43714227493662 39.0 35.0 41.0 32.0 41.0 25 37.48167548680575 39.0 35.0 41.0 33.0 41.0 26 37.256096683907394 39.0 35.0 41.0 32.0 41.0 27 37.18885186361648 39.0 35.0 41.0 32.0 41.0 28 37.05165325166464 39.0 35.0 41.0 32.0 41.0 29 36.935311321942066 39.0 35.0 41.0 31.0 41.0 30 36.93448724326203 39.0 35.0 41.0 31.0 41.0 31 36.84906774226415 39.0 35.0 41.0 31.0 41.0 32 36.62368372159925 39.0 35.0 41.0 30.0 41.0 33 36.4746513398021 39.0 35.0 41.0 30.0 41.0 34 36.30075275841609 39.0 35.0 41.0 30.0 41.0 35 36.35790785901362 39.0 35.0 41.0 30.0 41.0 36 36.155304369714656 39.0 35.0 41.0 30.0 41.0 37 36.18623279173884 39.0 35.0 41.0 30.0 41.0 38 35.96883484264592 39.0 35.0 41.0 30.0 41.0 39 36.06343308181453 39.0 35.0 41.0 30.0 41.0 40 35.96838834183383 39.0 35.0 40.0 29.0 41.0 41 35.86137797941901 38.0 35.0 40.0 28.0 41.0 42 36.111649176220986 39.0 35.0 41.0 30.0 41.0 43 35.82130677902106 38.0 35.0 40.0 29.0 41.0 44 35.83210670470414 38.0 35.0 40.0 29.0 41.0 45 35.8891059795149 38.0 35.0 40.0 29.0 41.0 46 35.70711644381581 38.0 35.0 40.0 28.0 41.0 47 35.44304267828568 38.0 35.0 40.0 28.0 41.0 48 35.49252335888477 38.0 35.0 40.0 28.0 41.0 49 35.65746795083097 38.0 35.0 40.0 28.0 41.0 50 35.45129545168501 38.0 35.0 40.0 27.0 41.0 51 34.33664063576921 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 5.0 11 7.0 12 5.0 13 4.0 14 6.0 15 7.0 16 19.0 17 39.0 18 85.0 19 266.0 20 596.0 21 1350.0 22 2030.0 23 2515.0 24 2803.0 25 2970.0 26 3287.0 27 3298.0 28 3782.0 29 4526.0 30 5743.0 31 7928.0 32 10875.0 33 14594.0 34 23725.0 35 32640.0 36 24706.0 37 33357.0 38 57363.0 39 95103.0 40 67.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 52.2181201416816 14.930507692399896 17.7377691740634 15.113602991855107 2 22.347815142670495 41.206331321582475 20.437750594834974 16.00810294091206 3 24.59380412698603 39.112272479368066 23.11495747754011 13.178965916105795 4 23.030751619689187 20.474010056756548 40.82695546379148 15.668282859762787 5 34.06531497785476 25.00554380202933 22.345118157899467 18.584023062216442 6 21.660084026058865 40.998663494213474 23.619892959671088 13.721359520056579 7 64.7674899462401 5.242339064925414 24.697188543208693 5.292982445625791 8 61.49904406873116 18.428796605395167 12.639568961900597 7.432590363973078 9 57.77870340958808 6.063421095215549 12.406129946719567 23.7517455484768 10 41.05200385968487 21.630417193577582 20.629835843526937 16.68774310321061 11 33.52951400334426 21.534824066693435 26.131385111445404 18.8042768185169 12 26.312083091104142 17.496239204569292 30.409701953216306 25.78197575111026 13 23.73316632005418 23.135634360784643 37.50367089593834 15.627528423222836 14 18.277465793243152 34.511216459997726 25.39151228926061 21.819805457498518 15 12.853529753735323 22.185996056408936 44.54579779806176 20.414676391793975 16 13.781891844917382 25.799655984609203 28.91467339514423 31.503778775329184 17 15.284412027353419 24.81915218785398 33.13875087652005 26.75768490827255 18 16.913990159002235 23.704698147471127 31.539738572276192 27.84157312125044 19 18.080885569932814 25.94109785260079 28.519115628727082 27.458900948739313 20 21.95255704122791 25.16376690859619 34.45218246000971 18.431493590166195 21 18.759327072333132 34.1024734347 28.640180278448696 18.49801921451817 22 15.890334605910592 22.615415964951186 32.01141124223118 29.48283818690704 23 17.637381407586318 31.411481963165183 29.033940055018487 21.91719657423001 24 20.911221254637315 24.330997944298275 26.150563669817146 28.607217131247264 25 14.220601367670943 37.85607690601907 25.609069060790034 22.31425266551995 26 15.477096605994497 25.656715791744826 31.004836592689372 27.8613510095713 27 23.98338657381048 28.64527458301619 24.290243507758326 23.081095335415007 28 13.767807591113135 26.733112380358758 37.131486997536754 22.36759303099135 29 20.104223478151425 24.571029588919586 28.690224329199953 26.63452260372903 30 20.13598796545462 29.69020634930148 30.92272838966036 19.25107729558354 31 21.41076276722624 23.137432350631993 26.119398512463064 29.332406369678697 32 24.918940624381943 27.602140806578245 22.393963548752495 25.08495502028732 33 20.35953803647522 20.33826182328157 29.410319263063894 29.89188087717931 34 19.905245935044622 24.544359406183887 26.656697811846357 28.89369684692514 35 22.024476635121935 20.27143653395504 25.19702972077218 32.50705711015085 36 19.028725884461174 26.337254948967054 33.67035654138673 20.96366262518504 37 22.016685345783415 19.733238239648074 31.44894008498499 26.801136329583525 38 16.56637878851444 21.65169340677123 33.46418703889052 28.317740765823807 39 18.883987701749444 21.48418068599306 28.648870562710886 30.98296104954661 40 18.358075671399376 20.13838528525109 33.175609668390734 28.327929374958792 41 16.675456839253712 22.703517467471368 28.27159235974181 32.34943333353311 42 18.372159925203622 20.07635463551749 32.214284430007254 29.337201009271634 43 22.261811294972222 20.94118775209316 30.365051872007097 26.431949080927524 44 21.22047550838163 20.488993305484467 30.92123006478757 27.369301121346336 45 17.711997986251372 19.46683607726562 29.392339364590388 33.42882657189262 46 27.03337668486632 24.029834644867037 26.531437852480927 22.405350817785717 47 15.685064098338058 20.024512594918882 41.22790719975068 23.06251610699238 48 20.710445721683158 23.0169670308595 27.07562944627906 29.19695780117828 49 17.948433651177982 16.38598047383026 38.92198522052345 26.743600654468302 50 21.818307132625726 17.95712393544018 32.70333766848663 27.521231263447465 51 19.018237610351626 18.939425722042756 26.80053699963441 35.24179966797121 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 120.0 1 254.0 2 388.0 3 868.5 4 1349.0 5 960.5 6 572.0 7 592.0 8 612.0 9 633.0 10 654.0 11 686.0 12 718.0 13 749.5 14 781.0 15 729.0 16 677.0 17 671.5 18 666.0 19 708.5 20 751.0 21 812.5 22 874.0 23 1041.5 24 1209.0 25 1292.0 26 1544.0 27 1713.0 28 2045.5 29 2378.0 30 3008.0 31 3638.0 32 3894.0 33 4150.0 34 5118.0 35 6086.0 36 6384.0 37 6682.0 38 7525.5 39 8369.0 40 10140.0 41 11911.0 42 15226.0 43 18541.0 44 22397.0 45 26253.0 46 52507.0 47 78761.0 48 58712.0 49 38663.0 50 37175.0 51 35687.0 52 28728.0 53 21769.0 54 18544.5 55 15320.0 56 13778.0 57 12236.0 58 10726.0 59 9216.0 60 7962.0 61 6708.0 62 5840.5 63 4973.0 64 4249.0 65 3525.0 66 2950.5 67 2376.0 68 1995.5 69 1615.0 70 1282.0 71 949.0 72 801.0 73 653.0 74 493.5 75 320.0 76 306.0 77 199.0 78 92.0 79 59.5 80 27.0 81 21.0 82 15.0 83 11.0 84 7.0 85 4.5 86 2.0 87 3.0 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 333706.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.09573503262906 #Duplication Level Percentage of deduplicated Percentage of total 1 75.16698675638743 22.62205716621374 2 10.526998145256435 6.336354937372306 3 3.69401681571918 3.3352245387588173 4 1.9009998158781258 2.2884794702297886 5 1.1469997994375016 1.7259901023174866 6 0.722999872631357 1.3055527557202729 7 0.5189999085580066 1.0933778610944336 8 0.4579999193053556 1.102707537310358 9 0.42699992476721754 1.156578893527205 >10 5.119999097911367 34.17309919391805 >50 0.25899995436700074 4.716301806001777 >100 0.04199999260005417 2.451899101110106 >500 0.005999998942864883 1.2390411929876406 >1k 0.006999998766675696 4.869489070327914 >5k 0.0 0.0 >10k+ 0.0029999994714324414 11.5838463731101 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGC 13862 4.153955877329146 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCG 12435 3.7263339586342465 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTC 12193 3.653815034791104 No Hit GCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 3703 1.109659400789917 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCT 2769 0.8297723145523305 No Hit GAACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCT 2284 0.6844348018914853 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTCTCCTT 2092 0.6268991267762641 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTA 1960 0.5873433501345495 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTC 1766 0.5292083450702115 No Hit CCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 1606 0.4812619491408605 No Hit CTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGCT 987 0.29576932988918386 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 751 0.2250483958933912 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTT 700 0.20976548219091054 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATG 643 0.19268457864107927 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTAT 530 0.15882243651597514 No Hit ATGAAGGGGTTCCAGAGGTCATCAAAACCTTTATTTGTCTCTCCTTTGAGC 506 0.1516304771265725 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGT 465 0.1393442131696763 No Hit TCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 429 0.12855627408557233 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAGTCTCCT 406 0.12166397967072813 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.98994923675331E-4 0.0 0.0 0.3170455430828334 0.0 2 8.98994923675331E-4 0.0 0.0 2.253780273654055 0.0 3 8.98994923675331E-4 0.0 0.0 2.7563184359885646 0.0 4 8.98994923675331E-4 0.0 0.0 4.042180841818847 0.0 5 8.98994923675331E-4 0.0 0.0 9.212300647875676 0.0 6 8.98994923675331E-4 0.0 0.0 10.394778637483293 0.0 7 8.98994923675331E-4 0.0 0.0 12.222135652340683 0.0 8 8.98994923675331E-4 0.0 0.0 14.258658819439866 0.0 9 8.98994923675331E-4 0.0 0.0 14.884359286317897 0.0 10 8.98994923675331E-4 0.0 0.0 20.0856442497288 0.0 11 8.98994923675331E-4 0.0 0.0 21.593558401706893 0.0 12 8.98994923675331E-4 0.0 0.0 27.471786542645322 0.0 13 8.98994923675331E-4 0.0 0.0 28.30185852217221 0.0 14 8.98994923675331E-4 0.0 0.0 28.718392836808448 0.0 15 8.98994923675331E-4 0.0 0.0 29.75403498888243 0.0 16 0.0011986598982337746 0.0 0.0 30.679700095293462 0.0 17 0.0011986598982337746 0.0 0.0 31.693167039250117 0.0 18 0.0011986598982337746 0.0 0.0 32.981426764876865 0.0 19 0.0014983248727922184 0.0 0.0 34.37756588134466 0.0 20 0.0014983248727922184 0.0 0.0 35.13961391164678 0.0 21 0.0014983248727922184 0.0 0.0 35.849220571401176 0.0 22 0.0014983248727922184 0.0 0.0 36.607972286983156 0.0 23 0.0014983248727922184 0.0 0.0 37.22108682492973 0.0 24 0.0014983248727922184 0.0 0.0 37.698752794375885 0.0 25 0.001797989847350662 0.0 0.0 38.114687779063004 0.0 26 0.001797989847350662 0.0 0.0 38.503952581014424 0.0 27 0.001797989847350662 0.0 0.0 39.03855489562669 0.0 28 0.001797989847350662 0.0 0.0 39.43141567727281 0.0 29 0.001797989847350662 0.0 0.0 39.86263357566241 0.0 30 0.001797989847350662 0.0 0.0 40.44488262122947 0.0 31 0.001797989847350662 0.0 0.0 40.87669984956818 0.0 32 0.001797989847350662 0.0 0.0 41.25787369720652 0.0 33 0.001797989847350662 0.0 0.0 41.63784888494663 0.0 34 0.001797989847350662 0.0 0.0 42.04599258029523 0.0 35 0.001797989847350662 0.0 0.0 42.45323728072015 0.0 36 0.001797989847350662 0.0 0.0 42.83231347353659 0.0 37 0.001797989847350662 0.0 0.0 43.2021000521417 0.0 38 0.001797989847350662 0.0 0.0 43.55240840740053 0.0 39 0.001797989847350662 0.0 0.0 43.91919833626006 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCGG 85 0.0 45.000004 2 CGGGCAT 45 3.8380676E-10 45.000004 6 TCACGAC 25 3.884836E-5 45.0 12 ATTTACG 20 7.026085E-4 45.0 10 TTAGGCG 25 3.884836E-5 45.0 1 AGCCGGT 20 7.026085E-4 45.0 15 GATACCA 20 7.026085E-4 45.0 11 GTACCGG 35 1.2084638E-7 45.0 2 GGTACCG 25 3.884836E-5 45.0 1 TTTACGT 25 3.884836E-5 45.0 18 GCGAACC 50 2.1827873E-11 45.0 33 GTTTACG 25 3.884836E-5 45.0 17 CGCATGG 25 3.884836E-5 45.0 2 CTGAGCG 20 7.026085E-4 45.0 1 CCGGATT 20 7.026085E-4 45.0 42 TGAACAC 20 7.026085E-4 45.0 17 AATGGTC 40 6.7902874E-9 45.0 10 TTCCGTC 20 7.026085E-4 45.0 42 GAATATG 20 7.026085E-4 45.0 1 TCGATCA 20 7.026085E-4 45.0 17 >>END_MODULE