##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935752.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 592235 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02223441708106 33.0 31.0 34.0 30.0 34.0 2 32.05882462198283 33.0 31.0 34.0 30.0 34.0 3 32.116082298411946 33.0 31.0 34.0 30.0 34.0 4 35.78234484621814 37.0 35.0 37.0 35.0 37.0 5 34.825278816685945 37.0 35.0 37.0 33.0 37.0 6 35.297160755443365 37.0 35.0 37.0 33.0 37.0 7 35.842020481734444 37.0 35.0 37.0 35.0 37.0 8 35.80541508016243 37.0 35.0 37.0 35.0 37.0 9 37.63145541887933 39.0 37.0 39.0 35.0 39.0 10 37.364632282793146 39.0 37.0 39.0 34.0 39.0 11 37.289336158788316 39.0 37.0 39.0 34.0 39.0 12 37.132457554855755 39.0 37.0 39.0 34.0 39.0 13 36.989353888236934 39.0 37.0 39.0 33.0 39.0 14 38.03737705471646 40.0 37.0 41.0 33.0 41.0 15 38.12277052183677 40.0 37.0 41.0 33.0 41.0 16 38.22896147644094 40.0 37.0 41.0 34.0 41.0 17 38.13519802105583 40.0 37.0 41.0 33.0 41.0 18 38.142485668695706 40.0 37.0 41.0 34.0 41.0 19 38.05197598926102 40.0 37.0 41.0 34.0 41.0 20 37.97673558638041 40.0 36.0 41.0 33.0 41.0 21 37.93397891039874 40.0 36.0 41.0 33.0 41.0 22 37.987037240284685 40.0 36.0 41.0 34.0 41.0 23 37.978018860756286 40.0 36.0 41.0 34.0 41.0 24 37.948912171688605 40.0 36.0 41.0 34.0 41.0 25 37.82747389127627 40.0 36.0 41.0 33.0 41.0 26 37.80354757824175 40.0 36.0 41.0 33.0 41.0 27 37.78997019764114 40.0 36.0 41.0 33.0 41.0 28 37.65760044576899 40.0 36.0 41.0 33.0 41.0 29 37.58362812059402 40.0 36.0 41.0 33.0 41.0 30 37.44560858443017 40.0 35.0 41.0 33.0 41.0 31 37.445110471350056 40.0 35.0 41.0 33.0 41.0 32 37.29370773426089 40.0 35.0 41.0 33.0 41.0 33 37.13746401344061 39.0 35.0 41.0 32.0 41.0 34 37.04002971793292 39.0 35.0 41.0 32.0 41.0 35 36.93017636580074 39.0 35.0 41.0 31.0 41.0 36 36.863319459336246 39.0 35.0 41.0 31.0 41.0 37 36.82205205703817 39.0 35.0 41.0 31.0 41.0 38 36.6901331397165 39.0 35.0 41.0 31.0 41.0 39 36.597874154685215 39.0 35.0 41.0 31.0 41.0 40 36.36859185965031 39.0 35.0 41.0 30.0 41.0 41 36.29241432877152 39.0 35.0 41.0 30.0 41.0 42 36.31467745067414 39.0 35.0 41.0 30.0 41.0 43 36.20980016378633 38.0 35.0 41.0 30.0 41.0 44 36.1191013702331 38.0 35.0 40.0 30.0 41.0 45 36.05255346273017 38.0 35.0 40.0 30.0 41.0 46 35.89423624068149 38.0 35.0 40.0 30.0 41.0 47 35.68416591386865 38.0 35.0 40.0 29.0 41.0 48 35.65222420154162 38.0 35.0 40.0 29.0 41.0 49 35.6295507695425 37.0 35.0 40.0 29.0 41.0 50 35.49584371068917 37.0 35.0 40.0 29.0 41.0 51 34.261207122172785 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 12.0 10 13.0 11 8.0 12 10.0 13 12.0 14 17.0 15 26.0 16 44.0 17 82.0 18 161.0 19 340.0 20 602.0 21 1132.0 22 1744.0 23 2214.0 24 2950.0 25 3734.0 26 4635.0 27 5565.0 28 6347.0 29 7676.0 30 9410.0 31 11989.0 32 16209.0 33 22213.0 34 40232.0 35 51137.0 36 45904.0 37 68785.0 38 113714.0 39 175173.0 40 142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.58134017746334 16.644068655179108 19.770530279365456 17.004060887992097 2 28.258883720144873 28.900520908085475 24.3965655525256 18.44402981924405 3 30.73948685910154 28.8773881989413 24.420204817344466 15.962920124612696 4 27.41006526125609 24.648830278521196 29.222521465296715 18.718582994926 5 26.486107710621624 29.83173909005716 23.879541060558733 19.802612138762484 6 24.615228752100098 35.272653591901864 24.51678809931868 15.595329556679358 7 75.94468412032386 5.84953607942793 13.183955693263655 5.021824106984559 8 75.78883382441091 8.399537345817116 9.62523322667522 6.186395603096743 9 69.30458348459648 7.348772024618606 12.373804317542868 10.97284017324204 10 40.39578883382441 25.47282750935017 18.34103016539043 15.790353491434988 11 32.92037789053332 23.549773316335575 24.693069474110786 18.836779319020323 12 27.104274485634928 21.439124671794136 29.530507315508203 21.926093527062736 13 25.020135588068925 24.52320447119809 32.22285072648526 18.233809214247724 14 21.151569900461812 28.607394024331555 28.702119935498576 21.538916139708057 15 18.47273464080981 23.275557844436754 36.204716033331366 22.046991481422072 16 22.53632426317256 24.674326914147258 28.823862149315726 23.96548667336446 17 22.25940716100872 24.706746477327414 28.712082197100813 24.321764164563053 18 25.59186809290231 21.92676893462899 29.000987783565645 23.480375188903054 19 23.749525104054978 26.09386476652005 25.643874475503814 24.512735653921165 20 25.77608550659789 25.028071626972405 28.39227671447989 20.803566151949816 21 23.824326492017526 29.216105093417312 27.346576950028282 19.61299146453688 22 23.042035678404687 22.699266338531157 28.202993744037418 26.05570423902674 23 20.737882766131687 28.226295305073158 27.370722770521837 23.66509915827332 24 22.61838628247233 23.646525450201356 28.77236232238892 24.962725944937397 25 21.242749921906 28.416929090648136 26.783287039773064 23.5570339476728 26 21.1856779825576 24.25540537117867 28.60199076380153 25.9569258824622 27 22.699266338531157 24.6704433206413 27.122003934249072 25.508286406578467 28 19.46068705834677 25.451383319121636 29.481202563171717 25.606727059359883 29 22.063538966795278 24.149366383276906 28.369988264793538 25.417106385134282 30 22.52636200157032 24.555455182486682 29.006728747878796 23.9114540680642 31 25.96975862622101 23.779918444536374 24.657779428774052 25.59254350046856 32 25.69841363647876 26.02649286178628 25.30110513563028 22.973988366104674 33 23.1722204868 26.16157437503694 23.31456263138788 27.351642506775182 34 23.586414176804816 24.782223272856214 27.957820797487482 23.673541752851488 35 22.27663005394818 26.6873791653651 26.316411559600496 24.719579221086224 36 22.58073231065371 28.895961907013263 25.12988931758508 23.393416464747947 37 23.39274105718169 26.18487593607267 25.5739697923966 24.848413214349033 38 21.613210971995915 30.084848075510568 23.655474600454212 24.646466352039308 39 25.943755434920256 25.548304304878975 24.600538637534086 23.907401622666676 40 25.165685918596502 26.78514441058026 25.98394218511233 22.06522748571091 41 21.774126824655752 26.515319087862082 25.38080322844817 26.329750859033997 42 23.237228465051878 25.096963198730233 27.436912712014657 24.228895624203233 43 23.066688054572932 25.09223534576646 26.48914704466977 25.35192955499084 44 23.40692461607301 23.337357636748926 27.51914358320599 25.73657416397207 45 22.327792177091865 22.969598216924027 27.02710917119049 27.67550043479362 46 25.938352174390232 24.57318463110083 25.533107634638274 23.955355559870657 47 20.878874095587054 25.551512490818677 30.59866438153773 22.97094903205653 48 22.96790969800839 25.989345445642353 26.16089896747068 24.88184588887857 49 23.78262007480139 22.79145947132473 29.75102788588989 23.674892567983992 50 22.32357087980278 23.227266203449645 29.24058861769399 25.208574299053588 51 21.395223179987674 22.837049482046822 25.836365631885993 29.931361706079514 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 176.0 1 670.5 2 1165.0 3 1755.5 4 2346.0 5 1626.5 6 907.0 7 934.5 8 962.0 9 1013.0 10 1064.0 11 1045.0 12 1026.0 13 1111.0 14 1196.0 15 1195.5 16 1195.0 17 1224.5 18 1254.0 19 1325.5 20 1397.0 21 1426.0 22 1455.0 23 1848.0 24 2241.0 25 2374.0 26 3157.5 27 3808.0 28 4690.0 29 5572.0 30 6254.0 31 6936.0 32 7981.0 33 9026.0 34 10010.0 35 10994.0 36 12068.5 37 13143.0 38 14940.0 39 16737.0 40 18598.0 41 20459.0 42 23544.0 43 26629.0 44 31553.0 45 36477.0 46 52718.0 47 68959.0 48 63958.5 49 58958.0 50 59410.5 51 59863.0 52 53327.0 53 46791.0 54 42792.5 55 38794.0 56 35415.0 57 32036.0 58 29333.0 59 26630.0 60 25406.0 61 24182.0 62 21570.5 63 18959.0 64 16968.0 65 14977.0 66 12956.0 67 10935.0 68 9355.0 69 7775.0 70 6704.5 71 5634.0 72 4662.0 73 3690.0 74 3134.5 75 2099.5 76 1620.0 77 1135.0 78 650.0 79 495.0 80 340.0 81 218.5 82 97.0 83 73.0 84 49.0 85 42.0 86 35.0 87 19.5 88 4.0 89 2.5 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 592235.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.197041629151297 #Duplication Level Percentage of deduplicated Percentage of total 1 74.01553064862748 23.090655908489545 2 10.314647593770047 6.435729807457388 3 3.634739910551858 3.4017939690187196 4 1.8454011752051684 2.3028422914144144 5 1.207631798570435 1.8837269746344358 6 0.8298510758659552 1.5533339135871715 7 0.6356145587007916 1.388050569351826 8 0.533444795291947 1.331351958846157 9 0.4824503733318554 1.3545921942750128 >10 6.169513204286407 43.616711416493644 >50 0.26853488295795136 5.181301565750708 >100 0.05501424579868643 3.066706548066678 >500 0.002178782011829166 0.5439423538738536 >1k 0.00381286852070104 1.803455233259359 >5k 0.0016340865088718742 3.0458052954810846 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 6578 1.1107077427034877 No Hit GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC 5858 0.9891343807779007 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 5488 0.9266591808994741 No Hit GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 2819 0.4759934823169856 No Hit CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 1933 0.32639070639188833 No Hit GAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT 1312 0.22153368173106958 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCT 1284 0.21680582876729676 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1172 0.19789441691220547 No Hit CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT 1077 0.18185348721369052 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCGAGAAT 1016 0.17155352182832828 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTA 953 0.16091585265983943 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTC 951 0.1605781488767128 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 742 0.1252881035399799 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6885189156331523E-4 0.0 0.0 0.19434852718937584 0.0 2 1.6885189156331523E-4 0.0 0.0 1.197159911183905 0.0 3 1.6885189156331523E-4 0.0 0.0 1.5529308467078102 0.0 4 1.6885189156331523E-4 0.0 0.0 2.189164774118382 0.0 5 1.6885189156331523E-4 0.0 0.0 4.2937347505635435 0.0 6 1.6885189156331523E-4 0.0 0.0 5.423522757013686 0.0 7 1.6885189156331523E-4 0.0 0.0 6.519202681368038 0.0 8 1.6885189156331523E-4 0.0 0.0 8.253818163397975 0.0 9 1.6885189156331523E-4 0.0 0.0 8.98342718684306 0.0 10 1.6885189156331523E-4 0.0 0.0 11.183736185804621 0.0 11 1.6885189156331523E-4 0.0 0.0 12.445566371457277 0.0 12 1.6885189156331523E-4 0.0 0.0 14.806622371187114 0.0 13 1.6885189156331523E-4 0.0 0.0 15.387979433839607 0.0 14 1.6885189156331523E-4 0.0 0.0 15.665065387895007 0.0 15 1.6885189156331523E-4 0.0 0.0 16.16537354259711 0.0 16 1.6885189156331523E-4 0.0 0.0 16.842300775874442 0.0 17 1.6885189156331523E-4 0.0 0.0 17.598419546294966 0.0 18 1.6885189156331523E-4 0.0 0.0 18.55868025361554 0.0 19 1.6885189156331523E-4 0.0 0.0 19.2442189333626 0.0 20 1.6885189156331523E-4 0.0 0.0 19.844487407870187 0.0 21 1.6885189156331523E-4 0.0 0.0 20.406088799209773 0.0 22 1.6885189156331523E-4 0.0 0.0 21.013280201271456 0.0 23 1.6885189156331523E-4 0.0 0.0 21.561204589394414 0.0 24 1.6885189156331523E-4 0.0 0.0 22.001739174483102 0.0 25 1.6885189156331523E-4 0.0 0.0 22.44159835200554 0.0 26 1.6885189156331523E-4 0.0 0.0 22.830633110167415 0.0 27 1.6885189156331523E-4 0.0 0.0 23.311692149231302 0.0 28 1.6885189156331523E-4 0.0 0.0 23.72774321004331 0.0 29 1.6885189156331523E-4 0.0 0.0 24.19934654317965 0.0 30 1.6885189156331523E-4 0.0 0.0 24.842165694361192 0.0 31 1.6885189156331523E-4 0.0 0.0 25.275270796221093 0.0 32 1.6885189156331523E-4 0.0 0.0 25.7419774245021 0.0 33 1.6885189156331523E-4 0.0 0.0 26.179810379325776 0.0 34 1.6885189156331523E-4 0.0 0.0 26.62473511359511 0.0 35 1.6885189156331523E-4 0.0 0.0 27.13416127044163 0.0 36 1.6885189156331523E-4 0.0 0.0 27.553420517193345 0.0 37 1.6885189156331523E-4 0.0 0.0 27.966432243957215 0.0 38 1.6885189156331523E-4 0.0 0.0 28.432125760888837 0.0 39 1.6885189156331523E-4 0.0 0.0 29.020405751095428 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 25 3.8885075E-5 45.0 1 TCGTTTA 20 7.0305134E-4 45.0 38 CGAACGT 25 3.8885075E-5 45.0 37 CGACGGT 35 1.210592E-7 45.0 28 TTGTACG 35 1.210592E-7 45.0 1 TAACGCC 35 1.210592E-7 45.0 12 CCGCTAG 25 3.8885075E-5 45.0 1 TATTGCG 20 7.0305134E-4 45.0 1 TGTTACG 25 3.8885075E-5 45.0 1 GTATCCG 20 7.0305134E-4 45.0 1 ATGGTCG 20 7.0305134E-4 45.0 44 CATCGTT 20 7.0305134E-4 45.0 36 CGGTCTA 35 1.210592E-7 45.0 31 CCGAACG 25 3.8885075E-5 45.0 36 TCGACAC 20 7.0305134E-4 45.0 42 ACGACAC 20 7.0305134E-4 45.0 34 TCCAACG 30 2.1637134E-6 44.999996 38 TACACGG 30 2.1637134E-6 44.999996 2 CGAGTAC 65 0.0 41.53846 27 CCGAGTA 65 0.0 41.53846 26 >>END_MODULE