##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935750.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 552467 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16109016466142 33.0 31.0 34.0 30.0 34.0 2 32.17872922726606 34.0 31.0 34.0 30.0 34.0 3 32.244378397261734 34.0 31.0 34.0 30.0 34.0 4 35.87397799325571 37.0 35.0 37.0 35.0 37.0 5 34.916130737220506 37.0 35.0 37.0 33.0 37.0 6 35.39659020357777 37.0 35.0 37.0 33.0 37.0 7 35.934276617426924 37.0 35.0 37.0 35.0 37.0 8 35.91893452459604 37.0 35.0 37.0 35.0 37.0 9 37.76908123019113 39.0 38.0 39.0 35.0 39.0 10 37.470124007406774 39.0 37.0 39.0 35.0 39.0 11 37.36871523548013 39.0 37.0 39.0 35.0 39.0 12 37.19979835899701 39.0 37.0 39.0 34.0 39.0 13 37.074145605076865 39.0 37.0 39.0 33.0 39.0 14 38.10132912916065 40.0 37.0 41.0 33.0 41.0 15 38.22053624922393 40.0 37.0 41.0 33.0 41.0 16 38.29062550342373 40.0 37.0 41.0 34.0 41.0 17 38.30795866540445 40.0 37.0 41.0 34.0 41.0 18 38.29780240267745 40.0 37.0 41.0 34.0 41.0 19 38.231764069166125 40.0 37.0 41.0 34.0 41.0 20 38.176343564411994 40.0 37.0 41.0 34.0 41.0 21 38.071837774925925 40.0 36.0 41.0 34.0 41.0 22 38.12430425708685 40.0 36.0 41.0 34.0 41.0 23 38.15474589432491 40.0 36.0 41.0 34.0 41.0 24 38.11076317680513 40.0 36.0 41.0 34.0 41.0 25 37.94793535179477 40.0 36.0 41.0 34.0 41.0 26 37.95516474287152 40.0 36.0 41.0 34.0 41.0 27 37.94274771162802 40.0 36.0 41.0 34.0 41.0 28 37.81059140183939 40.0 36.0 41.0 33.0 41.0 29 37.753599762519755 40.0 36.0 41.0 33.0 41.0 30 37.633426068887374 40.0 36.0 41.0 33.0 41.0 31 37.554389673953374 40.0 35.0 41.0 33.0 41.0 32 37.456778413914314 40.0 35.0 41.0 33.0 41.0 33 37.32891014304927 40.0 35.0 41.0 33.0 41.0 34 37.15493052073698 40.0 35.0 41.0 32.0 41.0 35 37.106667004545066 39.0 35.0 41.0 32.0 41.0 36 37.046786504895316 39.0 35.0 41.0 32.0 41.0 37 36.9775606506814 39.0 35.0 41.0 32.0 41.0 38 36.843340869228385 39.0 35.0 41.0 31.0 41.0 39 36.79195137447123 39.0 35.0 41.0 31.0 41.0 40 36.659771533865374 39.0 35.0 41.0 31.0 41.0 41 36.568404990705325 39.0 35.0 41.0 31.0 41.0 42 36.567266461164195 39.0 35.0 41.0 31.0 41.0 43 36.455857091916805 39.0 35.0 41.0 31.0 41.0 44 36.30697580126958 38.0 35.0 41.0 31.0 41.0 45 36.287294987754926 38.0 35.0 41.0 31.0 41.0 46 36.21067502674368 38.0 35.0 40.0 31.0 41.0 47 36.10981832399039 38.0 35.0 40.0 30.0 41.0 48 36.053147065797596 38.0 35.0 40.0 30.0 41.0 49 36.00113671947827 38.0 35.0 40.0 30.0 41.0 50 35.86740384493554 38.0 35.0 40.0 30.0 41.0 51 34.69461886411315 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 12.0 10 21.0 11 16.0 12 13.0 13 12.0 14 25.0 15 22.0 16 41.0 17 78.0 18 138.0 19 261.0 20 471.0 21 894.0 22 1214.0 23 1700.0 24 2359.0 25 3098.0 26 3973.0 27 4807.0 28 5574.0 29 6502.0 30 8075.0 31 10029.0 32 13553.0 33 19792.0 34 36556.0 35 47895.0 36 41052.0 37 62594.0 38 103267.0 39 178262.0 40 157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.06036921662289 17.810475557816122 21.60780643911763 16.521348786443355 2 29.178756378209016 25.991597688187714 26.56755969134808 18.262086242255194 3 31.847694070415066 25.487857193280323 25.647504737839544 17.016943998465067 4 28.44368984934847 25.510120966501166 26.692454028928424 19.35373515522194 5 25.285854177715596 30.763104402615905 23.82278036516208 20.12826105450642 6 26.35433428602975 35.278306215574865 23.21984842533581 15.147511073059567 7 79.7021360551852 6.188061911390182 9.305533181167382 4.8042688522572385 8 80.8415706277479 6.159643924433496 7.828340878278703 5.1704445695399 9 75.09371600475686 6.969466049555901 10.443519703439302 7.4932982422479535 10 43.312089228858916 24.60219343417797 16.77457658104466 15.311140755918453 11 32.63796751661185 24.060984637996476 23.17568289146682 20.125364953924848 12 28.67537789587432 21.393313989794866 28.95810971515041 20.973198399180404 13 27.30534131450385 22.565510700186618 30.863562891539225 19.26558509377031 14 22.063037249283667 27.38226898620189 30.222800637866154 20.331893126648286 15 19.14431088191693 23.90930137003658 36.44036657393111 20.50602117411538 16 23.403569805979362 23.45895772960195 31.54396552192258 21.593506942496113 17 24.591876075856113 23.06255396249912 28.060680547435414 24.284889414209356 18 25.444234678270377 22.88951195275012 29.483027945560547 22.183225423418957 19 26.965773521314397 24.613415823931565 26.23505114332621 22.185759511427833 20 26.77752698351214 25.298343611473626 26.802686857314555 21.121442547699683 21 25.66198524074741 25.90417165188147 28.403687460065484 20.03015564730563 22 23.91364552090894 23.88251243965703 28.31807148662273 23.8857705528113 23 23.319944901686434 25.54559819862544 27.694866842725446 23.43959005696268 24 23.12663018786642 24.388425010000596 28.649131984353815 23.83581281777916 25 24.22696740257789 25.384864616348125 26.413704347952006 23.974463633121978 26 21.50535688104448 25.834303225351018 26.79381754928349 25.86652234432102 27 22.681535729735895 26.127533409235305 27.783740929322477 23.40718993170633 28 22.00746831937473 25.009457578461703 28.843713742178267 24.1393603599853 29 23.465473955910486 26.514524849448023 27.244704208577165 22.775296986064326 30 25.11932839427513 25.140325123491543 26.24772158337059 23.492624898862736 31 25.568767003278026 25.324227510421437 25.06357845807985 24.04342702822069 32 27.005594904311025 27.81994218659214 24.088497593521424 21.08596531557541 33 27.708985333060614 25.141411161209632 24.224433314569016 22.925170191160742 34 23.324832071417838 27.08541867659064 26.948396917824958 22.641352334166566 35 23.642860116531846 28.267751739017893 25.56062172039235 22.52876642405791 36 27.177550876341932 27.34697276036397 24.51114727214476 20.964329091149338 37 25.425048011917458 28.34630846729307 24.59549620158308 21.633147319206397 38 24.49956286981847 29.481036876410716 23.868574955608207 22.150825298162605 39 24.4689728074256 25.68424901396826 25.84606863396366 24.000709544642483 40 25.536185871735324 24.164882246360417 27.122343959005697 23.176587922898563 41 22.748508055684773 24.987193805240857 26.167173785945586 26.097124353128788 42 23.963965268513775 26.2196656089866 26.827484718544277 22.98888440395535 43 24.33068400465548 24.74663645068393 26.57425692394297 24.348422620717617 44 22.997391699413722 25.246575813578005 27.725637911404664 24.030394575603612 45 22.971869813038605 24.819943996655002 26.806850001900568 25.40133618840582 46 23.946226652451642 25.93186561369276 26.803772895032647 23.318134838822953 47 22.55754642358729 25.514465117373526 28.704519907976405 23.22346855106278 48 23.350353957792954 26.00553517223653 26.63091189156999 24.01319897840052 49 24.131577089672323 24.216831050542385 28.26594167615441 23.385650183630876 50 22.66904629597786 24.784466764530734 28.5486734954305 23.99781344406091 51 22.828512834250734 25.35735166082318 26.123913283508337 25.690222221417752 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 237.0 1 627.0 2 1017.0 3 1551.0 4 2085.0 5 1531.0 6 977.0 7 974.5 8 972.0 9 998.5 10 1025.0 11 1041.5 12 1058.0 13 1154.0 14 1250.0 15 1168.5 16 1087.0 17 1078.0 18 1069.0 19 1093.5 20 1118.0 21 1169.5 22 1221.0 23 1567.5 24 1914.0 25 2174.5 26 3228.5 27 4022.0 28 4266.0 29 4510.0 30 5869.5 31 7229.0 32 8391.5 33 9554.0 34 11217.5 35 12881.0 36 13634.0 37 14387.0 38 15801.0 39 17215.0 40 19744.0 41 22273.0 42 24868.0 43 27463.0 44 30288.0 45 33113.0 46 39966.0 47 46819.0 48 48763.5 49 50708.0 50 50717.5 51 50727.0 52 44750.5 53 38774.0 54 36152.0 55 33530.0 56 32274.5 57 31019.0 58 30333.0 59 29647.0 60 27595.0 61 25543.0 62 23477.5 63 21412.0 64 19042.5 65 16673.0 66 14825.0 67 12977.0 68 11110.5 69 9244.0 70 7741.0 71 6238.0 72 5066.5 73 3895.0 74 3163.5 75 1791.5 76 1151.0 77 961.0 78 771.0 79 600.0 80 429.0 81 308.0 82 187.0 83 149.0 84 111.0 85 83.5 86 56.0 87 30.5 88 5.0 89 4.5 90 4.0 91 2.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 552467.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.211366933330613 #Duplication Level Percentage of deduplicated Percentage of total 1 74.43370870349071 22.48744085849802 2 9.444539743151829 5.706649113935679 3 3.2707883128520923 2.9644495764247174 4 1.7892969306625615 2.162284244997155 5 1.1061384684009712 1.6708977573967034 6 0.8239730631768503 1.493601153288974 7 0.6345862321844766 1.3420202257955474 8 0.5358891980336867 1.2951956157923186 9 0.48262720324671865 1.3122744776364375 >10 7.1075929304979875 50.4838411544472 >50 0.3391055174393944 6.015495635838269 >100 0.027559812371399543 1.5416132975397043 >500 0.00119825271179998 0.2930458998141107 >1k 0.00299563177949995 1.2311909885951706 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGC 1624 0.2939542090296796 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTC 1449 0.2622781089187227 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCG 1414 0.2559428888965314 No Hit GCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 1252 0.22661987050810276 No Hit CCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC 1063 0.19240968238826936 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 955 0.17286100346265026 No Hit CTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGCT 664 0.12018817413528772 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0010860377180899492 0.0 0.0 0.13231559532062548 0.0 2 0.0010860377180899492 0.0 0.0 0.7026664036041972 0.0 3 0.0010860377180899492 0.0 0.0 0.9506450159014023 0.0 4 0.0010860377180899492 0.0 0.0 1.2858686582185 0.0 5 0.0010860377180899492 0.0 0.0 2.307649144654794 0.0 6 0.0010860377180899492 0.0 0.0 3.1509574327516394 0.0 7 0.0010860377180899492 0.0 0.0 3.8328081134257794 0.0 8 0.0010860377180899492 0.0 0.0 5.036318911355791 0.0 9 0.0010860377180899492 0.0 0.0 5.598162424180992 0.0 10 0.0010860377180899492 0.0 0.0 6.702481777192122 0.0 11 0.0010860377180899492 0.0 0.0 7.612400378665151 0.0 12 0.0010860377180899492 0.0 0.0 8.773917718162352 0.0 13 0.0010860377180899492 0.0 0.0 9.140817460590407 0.0 14 0.0010860377180899492 0.0 0.0 9.310601357185135 0.0 15 0.0010860377180899492 0.0 0.0 9.58247279928032 0.0 16 0.0010860377180899492 0.0 0.0 10.059424363808155 0.0 17 0.0010860377180899492 0.0 0.0 10.612941587461332 0.0 18 0.0010860377180899492 0.0 0.0 11.339862833436205 0.0 19 0.0010860377180899492 0.0 0.0 11.753281191455779 0.0 20 0.0010860377180899492 0.0 0.0 12.160726342025859 0.0 21 0.0010860377180899492 0.0 0.0 12.613423064183019 0.0 22 0.0010860377180899492 0.0 0.0 13.102321043609845 0.0 23 0.0010860377180899492 0.0 0.0 13.576919526415152 0.0 24 0.0010860377180899492 0.0 0.0 13.954136627165061 0.0 25 0.0010860377180899492 0.0 0.0 14.270716621988282 0.0 26 0.0010860377180899492 0.0 0.0 14.594898880838132 0.0 27 0.0010860377180899492 0.0 0.0 14.98080428333276 0.0 28 0.0012670440044382741 0.0 0.0 15.306615598759745 0.0 29 0.0012670440044382741 0.0 0.0 15.682384649218868 0.0 30 0.0012670440044382741 0.0 0.0 16.13471935880333 0.0 31 0.0012670440044382741 0.0 0.0 16.489491680046047 0.0 32 0.0012670440044382741 0.0 0.0 16.86888085623214 0.0 33 0.0012670440044382741 0.0 0.0 17.218403995170753 0.0 34 0.0012670440044382741 0.0 0.0 17.58258864330358 0.0 35 0.0012670440044382741 0.0 0.0 17.93953303998248 0.0 36 0.0012670440044382741 0.0 0.0 18.272946619436095 0.0 37 0.0012670440044382741 0.0 0.0 18.653240827053924 0.0 38 0.001448050290786599 0.0 0.0 19.040775286125687 0.0 39 0.001448050290786599 0.0 0.0 19.67140118776325 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTA 25 3.888165E-5 45.000004 5 TATACGA 25 3.888165E-5 45.000004 13 GTACGAG 35 1.2103919E-7 45.000004 1 ACCGGTA 20 7.0301036E-4 45.0 41 CCAATCG 20 7.0301036E-4 45.0 12 TACGCGT 20 7.0301036E-4 45.0 21 TACGCGG 40 6.8048394E-9 45.0 2 ATCGGTT 20 7.0301036E-4 45.0 30 CGTAAGG 90 0.0 40.0 2 TAGGGAT 245 0.0 39.489796 5 TAACGCG 40 3.453879E-7 39.375 1 CCGAACG 40 3.453879E-7 39.375 1 TATTGCG 35 6.2423987E-6 38.57143 1 TAGCACG 35 6.2423987E-6 38.57143 1 TTCGGTG 35 6.2423987E-6 38.57143 34 TCACGAC 65 9.094947E-12 38.07692 25 GGCGATA 125 0.0 37.8 8 CGTTTTT 585 0.0 37.69231 1 CTATACG 30 1.13915434E-4 37.500004 12 TAACGTG 30 1.13915434E-4 37.500004 42 >>END_MODULE