##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935749.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 334394 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.86899585518879 33.0 31.0 34.0 30.0 34.0 2 31.92595560925136 33.0 31.0 34.0 30.0 34.0 3 31.99161169159734 33.0 31.0 34.0 30.0 34.0 4 35.66926141019277 37.0 35.0 37.0 33.0 37.0 5 34.70711795068093 37.0 35.0 37.0 33.0 37.0 6 35.17244926643421 37.0 35.0 37.0 33.0 37.0 7 35.725306076065955 37.0 35.0 37.0 33.0 37.0 8 35.67015556499219 37.0 35.0 37.0 35.0 37.0 9 37.49537671130463 39.0 37.0 39.0 35.0 39.0 10 37.14357614072023 39.0 37.0 39.0 34.0 39.0 11 37.13650962636889 39.0 37.0 39.0 34.0 39.0 12 36.96960770827228 39.0 35.0 39.0 33.0 39.0 13 36.72477376986429 39.0 35.0 39.0 33.0 39.0 14 37.807039001895966 40.0 36.0 41.0 33.0 41.0 15 37.88566481456007 40.0 36.0 41.0 33.0 41.0 16 38.04390629018463 40.0 36.0 41.0 33.0 41.0 17 37.9578281906972 40.0 36.0 41.0 33.0 41.0 18 38.00009270501265 40.0 36.0 41.0 33.0 41.0 19 37.90214238293749 40.0 36.0 41.0 33.0 41.0 20 37.784063111180224 40.0 36.0 41.0 33.0 41.0 21 37.81364199118405 40.0 36.0 41.0 33.0 41.0 22 37.87674719044002 40.0 36.0 41.0 33.0 41.0 23 37.82604352948916 40.0 36.0 41.0 34.0 41.0 24 37.83162975412238 40.0 36.0 41.0 33.0 41.0 25 37.68718338247696 39.0 35.0 41.0 33.0 41.0 26 37.66140540799177 40.0 35.0 41.0 33.0 41.0 27 37.60383858562056 40.0 35.0 41.0 33.0 41.0 28 37.458133220093664 39.0 35.0 41.0 33.0 41.0 29 37.4606512078566 39.0 36.0 41.0 33.0 41.0 30 37.373684934538296 39.0 36.0 41.0 33.0 41.0 31 37.24083865141121 39.0 35.0 41.0 32.0 41.0 32 37.15574741173586 39.0 35.0 41.0 32.0 41.0 33 36.98007141276458 39.0 35.0 41.0 32.0 41.0 34 36.858627846193414 39.0 35.0 41.0 31.0 41.0 35 36.792606924765394 39.0 35.0 41.0 31.0 41.0 36 36.73046466144727 39.0 35.0 41.0 31.0 41.0 37 36.60891044695778 39.0 35.0 41.0 31.0 41.0 38 36.550488346082766 39.0 35.0 41.0 31.0 41.0 39 36.505032985041595 39.0 35.0 41.0 30.0 41.0 40 36.38824261200859 39.0 35.0 41.0 30.0 41.0 41 36.26275591069218 39.0 35.0 41.0 30.0 41.0 42 36.358065635148954 39.0 35.0 41.0 30.0 41.0 43 36.225473543185586 39.0 35.0 41.0 30.0 41.0 44 36.12528334838544 39.0 35.0 40.0 30.0 41.0 45 36.09957415503867 39.0 35.0 40.0 29.0 41.0 46 35.99011046848927 38.0 35.0 40.0 29.0 41.0 47 35.75661046549878 38.0 35.0 40.0 28.0 41.0 48 35.80125540530033 38.0 35.0 40.0 28.0 41.0 49 35.7961416771832 38.0 35.0 40.0 28.0 41.0 50 35.63786730623157 38.0 35.0 40.0 28.0 41.0 51 34.447451210248985 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 6.0 11 5.0 12 3.0 13 8.0 14 6.0 15 6.0 16 13.0 17 40.0 18 103.0 19 237.0 20 475.0 21 862.0 22 1226.0 23 1423.0 24 1860.0 25 2497.0 26 2983.0 27 3235.0 28 3762.0 29 4323.0 30 5407.0 31 7067.0 32 9458.0 33 12713.0 34 22045.0 35 32265.0 36 24287.0 37 35231.0 38 62617.0 39 100156.0 40 68.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.265728452065524 18.365461102770983 22.590118243748393 15.778692201415097 2 25.37545530123148 30.970352338857754 25.763620160648813 17.890572199261946 3 27.528903030556766 29.85699504177707 27.383565494596198 15.230536433069972 4 26.007942726245087 24.24565034061616 32.44316584627715 17.303241086861608 5 28.035790115851363 28.65452131318146 25.341064732022705 17.968623838944477 6 21.362823495636885 37.748883054121784 25.744481061263063 15.14381238897827 7 74.17537396005909 5.767447980525967 14.948533765557995 5.108644293856948 8 74.99057997452108 9.289341315932703 9.450827467000005 6.269251242546218 9 70.28266057405335 5.840714845362058 11.623115247283145 12.253509333301436 10 38.909490002811054 25.17718619353218 19.636715969784145 16.276607833872617 11 31.392608719055964 26.045323779732886 24.751640280627043 17.810427220584103 12 27.779505613138994 20.87597265501175 30.73679551666597 20.607726215183288 13 24.191522575165823 26.148196438931322 32.61541774074894 17.04486324515392 14 18.267971315274796 34.40851211445182 26.697548400988058 20.625968169285333 15 14.6147957200189 25.636524578790286 41.042303390611075 18.706376310579735 16 16.747011010963114 25.141001333755987 33.25926900602283 24.85271864925806 17 17.516163567528125 25.257032123782125 30.069020377159877 27.15778393152987 18 20.101138178316596 25.20290435833179 31.667434224298287 23.028523239053335 19 20.81496677571966 28.135373242342865 27.60097370168125 23.448686280256226 20 22.917277223873633 26.368894178723302 30.52716256870638 20.18666602869669 21 20.661853980633623 30.944335125630246 28.592319240177755 19.80149165355838 22 17.938419947726338 24.970244681423708 29.304652595441304 27.78668277540865 23 17.037087986028457 30.392291727722387 28.461934125612302 24.108686160636854 24 20.864010717895656 24.586864596852813 29.242151474009702 25.30697321124183 25 16.770635836767404 31.27209220261129 27.919759325825222 24.03751263479608 26 18.564029258898184 26.83152209668834 29.787615806503702 24.81683283790977 27 20.828124906547366 28.788195960453837 28.35756622427436 22.02611290872444 28 16.22905913383613 28.7588892145194 33.35526355137951 21.656788100264958 29 21.3646177862043 26.285758715766434 29.380311847700618 22.969311650328656 30 21.080222731269103 27.889256386179177 31.219459679300464 19.811061203251253 31 22.57516582235327 29.34622032691974 25.272881690460952 22.805732160266036 32 24.60779798680598 30.291213359091373 23.876026483728772 21.22496217037387 33 24.38560500487449 26.91076993008248 25.454105037769814 23.249520027273217 34 22.8389265357632 25.7863478411694 29.342631745784914 22.032093877282488 35 20.506348798124368 25.23011776527091 28.071376878771748 26.192156557832973 36 27.044743625782758 25.67719516498502 27.632373786611 19.64568742262122 37 19.21475863801384 28.211630591457983 33.17762878520548 19.395981985322702 38 21.353552994371906 29.952690538705838 24.760910781892022 23.932845685030234 39 23.186420808985808 27.19127735545494 28.86146282528993 20.760839010269322 40 24.80905757878431 22.870326620692953 28.998726053697137 23.3218897468256 41 21.611930836079594 24.120947146180853 28.231068739271635 26.036053278467914 42 22.6283964425199 22.968414505044947 28.578563012494246 25.824626039940906 43 26.069845750820885 23.783321471079027 27.290262385090642 22.85657039300944 44 22.222587725856325 25.773787807197497 28.806138866127977 23.197485600818197 45 20.201618450091807 26.06386478226284 27.378182622893952 26.356334144751404 46 26.166139344605465 25.90656530918617 27.7062387483029 20.221056597905466 47 19.89718715048715 24.1888311393147 33.3044253186361 22.609556391562048 48 21.995909017506296 24.056053637326027 28.831557982499685 25.11647936266799 49 22.10536074211858 20.759044719701908 33.51017063703296 23.625423901146554 50 21.870906774643085 22.217503902581985 31.049600172251896 24.861989150523037 51 19.8663851624132 22.189094301931256 27.252283234747033 30.69223730090851 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 149.0 1 260.5 2 372.0 3 878.0 4 1384.0 5 945.0 6 506.0 7 563.0 8 620.0 9 641.5 10 663.0 11 721.0 12 779.0 13 748.0 14 717.0 15 752.0 16 787.0 17 751.5 18 716.0 19 731.0 20 746.0 21 787.0 22 828.0 23 1030.0 24 1232.0 25 1481.5 26 2194.5 27 2658.0 28 2808.5 29 2959.0 30 3462.0 31 3965.0 32 4851.5 33 5738.0 34 7205.0 35 8672.0 36 9025.5 37 9379.0 38 10335.0 39 11291.0 40 13235.5 41 15180.0 42 17729.0 43 20278.0 44 24781.5 45 29285.0 46 40752.5 47 52220.0 48 46777.0 49 41334.0 50 40049.5 51 38765.0 52 31935.5 53 25106.0 54 21088.0 55 17070.0 56 14215.0 57 11360.0 58 10040.0 59 8720.0 60 7960.0 61 7200.0 62 6281.0 63 5362.0 64 4157.5 65 2953.0 66 2264.5 67 1576.0 68 1269.5 69 963.0 70 663.5 71 364.0 72 358.0 73 352.0 74 263.0 75 135.0 76 96.0 77 79.5 78 63.0 79 52.5 80 42.0 81 35.5 82 29.0 83 17.5 84 6.0 85 4.5 86 3.0 87 1.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 334394.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.375409162830387 #Duplication Level Percentage of deduplicated Percentage of total 1 71.43325768789984 22.41247687791757 2 12.09643196537832 7.590610046481706 3 4.632107372427389 4.360027922882175 4 2.261836593454006 2.838641943163276 5 1.3854112921562654 2.1733923075104187 6 0.8829910906964114 1.6622524054640269 7 0.6597416027437153 1.4489763909477897 8 0.5730369600706579 1.438341527011311 9 0.4125864425637686 1.1650561605427372 >10 5.195200378591036 36.396589223673175 >50 0.4006273834445121 7.74921753488422 >100 0.05381561867165087 2.8419738600880713 >500 0.005979513185738986 1.4811783667331053 >1k 0.005979513185738986 4.805621768697719 >5k 9.965855309564977E-4 1.6356436640027179 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGC 5231 1.56432232635753 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCG 4626 1.3833980274765696 No Hit GAATCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTC 4519 1.3513998456910112 No Hit GCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGC 2555 0.7640687332906692 No Hit CCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGC 1576 0.47130032237420527 No Hit CTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGCT 1058 0.31639323672075453 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCT 1035 0.309515122878999 No Hit GAACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCT 966 0.2888807813537324 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTAAGTCGT 938 0.2805074253724648 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTA 855 0.2556864058565644 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 782 0.23385587061968816 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTC 674 0.2015586404062274 No Hit TCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGC 522 0.15610327936506038 No Hit GCCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTG 428 0.12799272714223342 No Hit ACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGC 378 0.11304030574711268 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 374 0.11184411203550304 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCC 335 0.10018122334730886 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.34360664365987426 0.0 2 0.0 0.0 0.0 1.9683367524536923 0.0 3 0.0 0.0 0.0 2.5694240925375453 0.0 4 0.0 0.0 0.0 3.4692608120959108 0.0 5 0.0 0.0 0.0 6.324575201708164 0.0 6 0.0 0.0 0.0 7.590447197019086 0.0 7 0.0 0.0 0.0 8.995675759732531 0.0 8 0.0 0.0 0.0 11.121311985262894 0.0 9 0.0 0.0 0.0 11.919173190906536 0.0 10 0.0 0.0 0.0 14.863903060461611 0.0 11 0.0 0.0 0.0 16.639054528490345 0.0 12 0.0 0.0 0.0 19.883729971231542 0.0 13 0.0 0.0 0.0 20.674414014605524 0.0 14 0.0 0.0 0.0 21.018917803549108 0.0 15 0.0 0.0 0.0 21.67203957008798 0.0 16 0.0 0.0 0.0 22.633779314222146 0.0 17 0.0 0.0 0.0 23.72171749493113 0.0 18 0.0 0.0 0.0 25.24387399295442 0.0 19 0.0 0.0 0.0 26.237910967302046 0.0 20 0.0 0.0 0.0 27.068069403159146 0.0 21 0.0 0.0 0.0 27.875201110067763 0.0 22 0.0 0.0 0.0 28.749618713254424 0.0 23 0.0 0.0 0.0 29.580973342823135 0.0 24 0.0 0.0 0.0 30.203293121288063 0.0 25 0.0 0.0 0.0 30.69373254304802 0.0 26 0.0 0.0 0.0 31.20749774218437 0.0 27 0.0 0.0 0.0 31.749074445115642 0.0 28 2.990484279024145E-4 0.0 0.0 32.251475803991696 0.0 29 2.990484279024145E-4 0.0 0.0 32.767035293695464 0.0 30 2.990484279024145E-4 0.0 0.0 33.511964927600374 0.0 31 2.990484279024145E-4 0.0 0.0 34.079857892187064 0.0 32 2.990484279024145E-4 0.0 0.0 34.57508208879346 0.0 33 2.990484279024145E-4 0.0 0.0 35.09961303133429 0.0 34 2.990484279024145E-4 0.0 0.0 35.59782771221972 0.0 35 2.990484279024145E-4 0.0 0.0 36.14927301327177 0.0 36 2.990484279024145E-4 0.0 0.0 36.63104003062256 0.0 37 2.990484279024145E-4 0.0 0.0 37.114900386968664 0.0 38 2.990484279024145E-4 0.0 0.0 37.58769595148238 0.0 39 2.990484279024145E-4 0.0 0.0 38.079331566953954 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCC 35 1.208482E-7 45.000004 16 AGCCCGA 30 2.1608685E-6 45.000004 25 TAACCCG 30 2.1608685E-6 45.000004 37 GTGCTAG 30 2.1608685E-6 45.000004 1 GACGGTC 60 0.0 45.000004 29 CGGTCTA 60 0.0 45.000004 31 TCGAGTG 30 2.1608685E-6 45.000004 2 ACCCGTA 30 2.1608685E-6 45.000004 39 CGGTATT 30 2.1608685E-6 45.000004 28 GGTTAGC 30 2.1608685E-6 45.000004 15 ATCGAAT 30 2.1608685E-6 45.000004 11 CTTCGCA 20 7.026105E-4 45.0 40 AACCGTT 20 7.026105E-4 45.0 32 AAGTACC 20 7.026105E-4 45.0 41 CTGTCGG 25 3.8848528E-5 45.0 2 ACCGGAA 20 7.026105E-4 45.0 35 CAAAATC 25 3.8848528E-5 45.0 13 TTGTGCG 20 7.026105E-4 45.0 1 GATCGAA 40 6.7902874E-9 45.0 10 ACGTTAG 25 3.8848528E-5 45.0 1 >>END_MODULE