SRR2935744.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935744.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	472197
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC	6242	1.3219058994445114	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC	5409	1.1454964771059537	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG	4974	1.0533739096182315	No Hit
GAACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCT	4690	0.9932295207296955	No Hit
GCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	2544	0.5387581877902655	No Hit
CCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	1571	0.33270012304186597	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCT	1019	0.2157997615402046	No Hit
CTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCT	954	0.20203432042134956	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	917	0.19419860778446285	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACGATT	902	0.19102196752626552	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTC	872	0.18466868700987088	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTT	872	0.18466868700987088	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTA	792	0.16772660563281852	No Hit
TCGTAAGGTGGGAGGCATGGGGGTTAAGATTGTATAAACCATAGATCCTGT	493	0.10440557648608526	No Hit
TCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC	474	0.10038183215903532	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTAG	30	2.1627748E-6	45.000004	1
TCGTAAG	120	0.0	45.000004	1
CTAGCGG	65	0.0	45.000004	2
CGGGTTC	25	3.887303E-5	45.0	6
CGAAAGG	80	0.0	45.0	2
CCGCTCG	20	7.0290605E-4	45.0	19
ATCACGG	20	7.0290605E-4	45.0	2
CCGTAAT	20	7.0290605E-4	45.0	41
CGCTCGG	20	7.0290605E-4	45.0	20
GGGCGTA	20	7.0290605E-4	45.0	8
CGCTAGG	20	7.0290605E-4	45.0	2
AACGACG	25	3.887303E-5	45.0	1
GCGATAT	25	3.887303E-5	45.0	9
CCGCGTT	20	7.0290605E-4	45.0	45
CGGTAAT	20	7.0290605E-4	45.0	6
GCGCTAG	20	7.0290605E-4	45.0	1
CAATCGG	20	7.0290605E-4	45.0	2
GCCGTAA	20	7.0290605E-4	45.0	40
TCGAAGA	25	3.887303E-5	45.0	23
TAACTCG	20	7.0290605E-4	45.0	27