##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935744.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 472197 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.986632697793507 33.0 31.0 34.0 30.0 34.0 2 31.995203273210123 33.0 31.0 34.0 30.0 34.0 3 32.026241166292884 33.0 31.0 34.0 30.0 34.0 4 35.70451315870283 37.0 35.0 37.0 33.0 37.0 5 34.75358377965129 37.0 35.0 37.0 33.0 37.0 6 35.22952496521579 37.0 35.0 37.0 33.0 37.0 7 35.766792249844876 37.0 35.0 37.0 33.0 37.0 8 35.7494266164334 37.0 35.0 37.0 35.0 37.0 9 37.53720586958409 39.0 37.0 39.0 35.0 39.0 10 37.24951450348054 39.0 37.0 39.0 34.0 39.0 11 37.18227138249502 39.0 37.0 39.0 34.0 39.0 12 37.098101004453646 39.0 37.0 39.0 34.0 39.0 13 36.99133412537564 39.0 37.0 39.0 33.0 39.0 14 38.157203455337495 40.0 37.0 41.0 33.0 41.0 15 38.21678452002025 40.0 37.0 41.0 33.0 41.0 16 38.295452957134415 40.0 37.0 41.0 34.0 41.0 17 38.185248953297034 40.0 37.0 41.0 34.0 41.0 18 38.17956064947469 40.0 37.0 41.0 34.0 41.0 19 38.13723085915412 40.0 37.0 41.0 34.0 41.0 20 38.00963792654337 40.0 36.0 41.0 34.0 41.0 21 38.00230624082745 40.0 36.0 41.0 34.0 41.0 22 38.03760294961637 40.0 37.0 41.0 34.0 41.0 23 38.059417997149495 40.0 37.0 41.0 34.0 41.0 24 38.04740394369299 40.0 36.0 41.0 34.0 41.0 25 37.922083367746936 40.0 36.0 41.0 34.0 41.0 26 37.94787133336298 40.0 36.0 41.0 34.0 41.0 27 37.881136474818774 40.0 36.0 41.0 34.0 41.0 28 37.59520496741826 40.0 36.0 41.0 33.0 41.0 29 37.4651046067637 40.0 36.0 41.0 33.0 41.0 30 37.48466635747368 40.0 36.0 41.0 33.0 41.0 31 37.4976291674873 40.0 36.0 41.0 33.0 41.0 32 37.330376940133036 40.0 36.0 41.0 32.0 41.0 33 37.31294142063588 40.0 36.0 41.0 32.0 41.0 34 37.23837932049547 40.0 36.0 41.0 32.0 41.0 35 37.14476161432622 40.0 35.0 41.0 32.0 41.0 36 37.08332115621234 40.0 35.0 41.0 31.0 41.0 37 37.06948582900781 40.0 35.0 41.0 32.0 41.0 38 37.04030944711635 40.0 35.0 41.0 31.0 41.0 39 36.954466038539 39.0 35.0 41.0 31.0 41.0 40 36.798279108084124 39.0 35.0 41.0 31.0 41.0 41 36.68671973773658 39.0 35.0 41.0 31.0 41.0 42 36.705807110168 39.0 35.0 41.0 31.0 41.0 43 36.58548444822818 39.0 35.0 41.0 31.0 41.0 44 36.552068310472116 39.0 35.0 41.0 30.0 41.0 45 36.48418350815444 39.0 35.0 41.0 30.0 41.0 46 36.358710453475986 39.0 35.0 41.0 30.0 41.0 47 36.25268902597856 39.0 35.0 41.0 30.0 41.0 48 36.186487842997735 39.0 35.0 41.0 30.0 41.0 49 36.23423486383861 39.0 35.0 41.0 30.0 41.0 50 36.08690228866342 39.0 35.0 40.0 30.0 41.0 51 34.76332759420327 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 7.0 10 9.0 11 7.0 12 6.0 13 4.0 14 5.0 15 16.0 16 23.0 17 41.0 18 100.0 19 223.0 20 500.0 21 892.0 22 1408.0 23 1908.0 24 2522.0 25 2998.0 26 3687.0 27 4365.0 28 5019.0 29 5818.0 30 7220.0 31 9216.0 32 12137.0 33 16722.0 34 28031.0 35 39790.0 36 33054.0 37 48290.0 38 87101.0 39 160958.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.39481191113031 17.46961543593034 22.86418592240103 16.271386730538314 2 26.143537548946732 30.756866307918095 26.757476222847664 16.342119920287505 3 28.5675258419685 29.45423202603998 26.565183599218123 15.413058532773396 4 26.781830464827177 24.448270531155426 30.763219588434488 18.0066794155829 5 26.62321022793453 30.736747586282842 24.90231831206043 17.737723873722196 6 24.811254624658776 36.490913749981466 24.056696675328308 14.641134950031448 7 77.01849016406288 5.145733666245232 13.327276539241037 4.508499630450849 8 77.68770237845645 8.14829403829334 8.087514321353165 6.076489261897048 9 71.2539469755208 7.48839996865715 10.936960632956161 10.32069242286588 10 40.70504471650603 30.37926966922704 15.365620704917651 13.550064909349278 11 27.373109104886307 25.76361137406633 28.009072484577413 18.854207036469948 12 24.484060678064452 20.346380853753836 33.84328998278261 21.3262684853991 13 23.939160985775004 25.11494143334244 33.47035241647024 17.475545164412313 14 18.202995783539496 31.752425364837134 29.79519141375316 20.24938743787021 15 16.517258686522787 25.291350855681 38.30625776953263 19.885132688263585 16 18.941246979544555 26.24879022950167 30.109255247280263 24.70070754367351 17 19.693263616668467 25.453783060883488 28.869730218531668 25.983223103916377 18 22.55732247345917 23.35889469861096 30.124079568485186 23.95970325944468 19 22.795358716806756 26.25154331772544 26.990853393816565 23.96224457165124 20 22.4870128357444 25.12044760978998 30.785456070241867 21.607083484223747 21 22.99845191731417 28.684002651435737 28.869094890480035 19.44845054077006 22 20.380053240490728 24.7214615933604 29.16769907475058 25.730786091398294 23 19.215285145818374 27.042950294051 28.843893544431666 24.897871015698954 24 20.052859293896404 25.357001421017078 28.614751893807032 25.975387391279487 25 18.230314889759995 29.75918949082692 26.779924480672264 25.23057113874082 26 19.05370004468474 25.788812720114695 28.95338174533087 26.204105489869693 27 21.6691338572672 26.519228203482868 26.520498859586144 25.291139079663782 28 18.70786980857566 25.531504859200716 32.620283483376646 23.140341848846983 29 20.107921058371826 23.598836926113464 32.66115625469878 23.63208576081593 30 21.734572646586063 24.989358255135038 29.019667638718587 24.256401459560312 31 23.408873838673266 25.83730942805651 26.116006666709023 24.6378100665612 32 23.70451315870283 29.020302966770224 25.06729182946948 22.207892045057463 33 22.9264480714617 25.73459805970813 25.618121250240893 25.720832618589274 34 22.649656816964107 26.202834833766413 27.798990675501962 23.348517673767518 35 21.177813497332682 26.421599459547608 28.58277371520785 23.817813327911868 36 22.668504882496077 24.125947432957005 30.5654207883574 22.640126896189514 37 22.33432232733372 27.35320215926827 28.967147186449722 21.345328326948287 38 20.04925910160378 27.00059509060837 26.517745771362378 26.432400036425474 39 21.91415870918282 26.671918711893554 28.35596160077256 23.05796097815107 40 21.87709790617052 25.22252365008672 27.663454024485546 25.236924419257218 41 22.34088738386733 24.175926573019314 28.0200848374725 25.463101205640864 42 22.556898921424747 24.604349455841522 29.853429818486777 22.985321804246954 43 22.438939679837016 23.271219427484716 29.245420873067808 25.04442001961046 44 22.322674646386993 23.395955501623263 28.473285514308643 25.808084337681098 45 20.73731938152932 24.59376065498087 27.085305497493632 27.58361446599618 46 24.007564639334856 25.62849827508434 27.310211627774 23.053725457806806 47 19.91096936236359 23.606037310698714 31.398124088039523 25.08486923889817 48 20.146887845539045 24.766781661044014 29.178499651628453 25.907830841788492 49 20.32986232441121 21.791752171233618 33.09529708998575 24.783088414369423 50 20.86311433575393 21.94910175202299 30.905533072001727 26.282250840221348 51 20.565145479535023 22.355499929055036 28.217671861532367 28.861682729877575 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 168.0 1 356.5 2 545.0 3 1138.5 4 1732.0 5 1232.0 6 732.0 7 707.5 8 683.0 9 691.5 10 700.0 11 749.5 12 799.0 13 788.5 14 778.0 15 703.0 16 628.0 17 679.0 18 730.0 19 847.5 20 965.0 21 1035.0 22 1105.0 23 1196.5 24 1288.0 25 1827.5 26 2860.5 27 3354.0 28 3787.5 29 4221.0 30 5459.0 31 6697.0 32 7708.5 33 8720.0 34 10151.0 35 11582.0 36 12654.5 37 13727.0 38 14906.5 39 16086.0 40 18958.0 41 21830.0 42 25204.0 43 28578.0 44 32991.0 45 37404.0 46 52556.5 47 67709.0 48 59474.0 49 51239.0 50 49471.0 51 47703.0 52 40782.0 53 33861.0 54 29547.0 55 25233.0 56 23295.0 57 21357.0 58 19181.0 59 17005.0 60 15690.5 61 14376.0 62 12543.5 63 10711.0 64 8689.5 65 6668.0 66 5573.5 67 4479.0 68 3460.0 69 2441.0 70 2036.0 71 1631.0 72 1365.5 73 1100.0 74 850.5 75 428.0 76 255.0 77 233.5 78 212.0 79 133.5 80 55.0 81 53.5 82 52.0 83 49.5 84 47.0 85 36.5 86 26.0 87 16.0 88 6.0 89 7.5 90 9.0 91 5.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 472197.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.77925590523429 #Duplication Level Percentage of deduplicated Percentage of total 1 76.40713953635387 25.809763193854412 2 9.677278257976269 6.537825174846805 3 3.2935302462463776 3.33759003058757 4 1.5886279018114937 2.146506737339434 5 0.9955314164284527 1.681415523861853 6 0.6770024209752825 1.372118281595233 7 0.5615130693716843 1.3277245565107785 8 0.48354979524808905 1.3067161821287072 9 0.3831815897874277 1.1649230081643627 >10 5.724271140846828 43.16150660641359 >50 0.1688336569659356 3.5503233844586415 >100 0.031381720625638584 1.870566297687722 >500 0.0037658064750766304 1.1255623341747836 >1k 0.0031381720625638584 3.1373274479409394 >5k 0.0012552688250255435 2.4701312404351863 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC 6242 1.3219058994445114 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC 5409 1.1454964771059537 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG 4974 1.0533739096182315 No Hit GAACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCT 4690 0.9932295207296955 No Hit GCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 2544 0.5387581877902655 No Hit CCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 1571 0.33270012304186597 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCT 1019 0.2157997615402046 No Hit CTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCT 954 0.20203432042134956 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 917 0.19419860778446285 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACGATT 902 0.19102196752626552 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTC 872 0.18466868700987088 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTT 872 0.18466868700987088 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCACGATTCGTA 792 0.16772660563281852 No Hit TCGTAAGGTGGGAGGCATGGGGGTTAAGATTGTATAAACCATAGATCCTGT 493 0.10440557648608526 No Hit TCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 474 0.10038183215903532 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.353280516394641E-4 0.0 0.0 0.21389377738528623 0.0 2 6.353280516394641E-4 0.0 0.0 1.3329182523395955 0.0 3 6.353280516394641E-4 0.0 0.0 1.7350809090273762 0.0 4 6.353280516394641E-4 0.0 0.0 3.237843527171922 0.0 5 6.353280516394641E-4 0.0 0.0 5.716046480600258 0.0 6 6.353280516394641E-4 0.0 0.0 6.895427120460316 0.0 7 6.353280516394641E-4 0.0 0.0 7.9115284510490325 0.0 8 6.353280516394641E-4 0.0 0.0 9.447539903896043 0.0 9 6.353280516394641E-4 0.0 0.0 10.024205998767464 0.0 10 6.353280516394641E-4 0.0 0.0 12.222864609474435 0.0 11 6.353280516394641E-4 0.0 0.0 13.484202567995984 0.0 12 6.353280516394641E-4 0.0 0.0 16.119331550179268 0.0 13 6.353280516394641E-4 0.0 0.0 16.975753763789267 0.0 14 6.353280516394641E-4 0.0 0.0 17.270545979749976 0.0 15 6.353280516394641E-4 0.0 0.0 17.752971746961542 0.0 16 6.353280516394641E-4 0.0 0.0 18.433831642301836 0.0 17 6.353280516394641E-4 0.0 0.0 19.27246467046593 0.0 18 6.353280516394641E-4 0.0 0.0 20.371158647767775 0.0 19 6.353280516394641E-4 0.0 0.0 21.164683384265466 0.0 20 6.353280516394641E-4 0.0 0.0 21.772904105701645 0.0 21 8.471040688526187E-4 0.0 0.0 22.396584476394388 0.0 22 8.471040688526187E-4 0.0 0.0 23.059866962305986 0.0 23 8.471040688526187E-4 0.0 0.0 23.66342861136348 0.0 24 8.471040688526187E-4 0.0 0.0 24.159408043676684 0.0 25 8.471040688526187E-4 0.0 0.0 24.579571661827586 0.0 26 8.471040688526187E-4 0.0 0.0 25.023242417889143 0.0 27 8.471040688526187E-4 0.0 0.0 25.5022797688253 0.0 28 0.0010588800860657733 0.0 0.0 25.94552697285243 0.0 29 0.0010588800860657733 0.0 0.0 26.41736393920334 0.0 30 0.0010588800860657733 0.0 0.0 26.97094644819853 0.0 31 0.0010588800860657733 0.0 0.0 27.49064479443961 0.0 32 0.0010588800860657733 0.0 0.0 27.91080841259051 0.0 33 0.0010588800860657733 0.0 0.0 28.380315842752072 0.0 34 0.0010588800860657733 0.0 0.0 28.833516519588223 0.0 35 0.0010588800860657733 0.0 0.0 29.34707336133012 0.0 36 0.0010588800860657733 0.0 0.0 29.87714873241465 0.0 37 0.0010588800860657733 0.0 0.0 30.317854624235224 0.0 38 0.0012706561032789282 0.0 0.0 30.75813696402137 0.0 39 0.0012706561032789282 0.0 0.0 31.198842855841946 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGTAG 30 2.1627748E-6 45.000004 1 TCGTAAG 120 0.0 45.000004 1 CTAGCGG 65 0.0 45.000004 2 CGGGTTC 25 3.887303E-5 45.0 6 CGAAAGG 80 0.0 45.0 2 CCGCTCG 20 7.0290605E-4 45.0 19 ATCACGG 20 7.0290605E-4 45.0 2 CCGTAAT 20 7.0290605E-4 45.0 41 CGCTCGG 20 7.0290605E-4 45.0 20 GGGCGTA 20 7.0290605E-4 45.0 8 CGCTAGG 20 7.0290605E-4 45.0 2 AACGACG 25 3.887303E-5 45.0 1 GCGATAT 25 3.887303E-5 45.0 9 CCGCGTT 20 7.0290605E-4 45.0 45 CGGTAAT 20 7.0290605E-4 45.0 6 GCGCTAG 20 7.0290605E-4 45.0 1 CAATCGG 20 7.0290605E-4 45.0 2 GCCGTAA 20 7.0290605E-4 45.0 40 TCGAAGA 25 3.887303E-5 45.0 23 TAACTCG 20 7.0290605E-4 45.0 27 >>END_MODULE